EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005312 (Gene tree)
Gene ID: 103459985
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 12294 bases
Position: chrKK215286.1:328637-340930
Accession: 103459985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007771	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007879	-	567	-	ENSPREP00000007786	188 (aa)	-	-
ENSPRET00000007863	-	2991	XM_008401941	ENSPREP00000007771	219 (aa)	XP_008400163	-

Gene Model

Click here to download ENSPREG00000005312's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005312	sar1b	66	30.667	ENSPREG00000015645	arl4cb	75	30.667
ENSPREG00000005312	sar1b	83	30.645	ENSPREG00000021943	ARL6	94	30.645
ENSPREG00000005312	sar1b	54	35.200	ENSPREG00000021699	-	65	35.200
ENSPREG00000005312	sar1b	90	81.313	ENSPREG00000016098	sar1ab	100	81.313
ENSPREG00000005312	sar1b	80	32.778	ENSPREG00000013042	-	89	30.348
ENSPREG00000005312	sar1b	68	31.126	ENSPREG00000021315	arl8bb	76	31.126
ENSPREG00000005312	sar1b	68	30.464	ENSPREG00000004992	arl8a	76	30.464
ENSPREG00000005312	sar1b	68	31.126	ENSPREG00000004191	arl8ba	76	31.126
ENSPREG00000005312	sar1b	58	31.250	ENSPREG00000003821	arl3	57	31.250
ENSPREG00000005312	sar1b	54	84.746	ENSPREG00000002020	-	87	84.746
ENSPREG00000005312	sar1b	79	33.520	ENSPREG00000001895	-	81	33.520
ENSPREG00000005312	sar1b	78	31.818	ENSPREG00000011615	arl4d	82	31.818
ENSPREG00000005312	sar1b	84	30.435	ENSPREG00000013361	arl1	91	30.435
ENSPREG00000005312	sar1b	85	30.319	ENSPREG00000003600	arl3l2	94	30.319
ENSPREG00000005312	sar1b	71	30.968	ENSPREG00000000912	-	86	30.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005312	sar1b	90	93.434	ENSAPOG00000007186	sar1b	100	93.434	Acanthochromis_polyacanthus
ENSPREG00000005312	sar1b	90	84.343	ENSAPOG00000017891	-	100	84.343	Acanthochromis_polyacanthus
ENSPREG00000005312	sar1b	90	92.424	ENSACIG00000013634	sar1b	100	92.424	Amphilophus_citrinellus
ENSPREG00000005312	sar1b	90	82.828	ENSACIG00000024513	-	100	82.828	Amphilophus_citrinellus
ENSPREG00000005312	sar1b	90	84.343	ENSAOCG00000002627	-	100	84.343	Amphiprion_ocellaris
ENSPREG00000005312	sar1b	90	92.929	ENSAOCG00000005888	sar1b	100	92.929	Amphiprion_ocellaris
ENSPREG00000005312	sar1b	90	84.343	ENSAPEG00000019680	-	100	84.343	Amphiprion_percula
ENSPREG00000005312	sar1b	93	92.611	ENSAPEG00000022771	sar1b	100	92.929	Amphiprion_percula
ENSPREG00000005312	sar1b	90	93.434	ENSATEG00000012904	sar1b	100	93.434	Anabas_testudineus
ENSPREG00000005312	sar1b	90	82.828	ENSATEG00000023368	-	100	82.828	Anabas_testudineus
ENSPREG00000005312	sar1b	90	89.899	ENSACAG00000001470	-	100	89.899	Anolis_carolinensis
ENSPREG00000005312	sar1b	90	94.444	ENSACLG00000014649	sar1b	100	94.444	Astatotilapia_calliptera
ENSPREG00000005312	sar1b	90	83.838	ENSACLG00000005011	-	100	83.838	Astatotilapia_calliptera
ENSPREG00000005312	sar1b	95	82.692	ENSAMXG00000034192	-	95	82.692	Astyanax_mexicanus
ENSPREG00000005312	sar1b	53	90.598	ENSAMXG00000018108	sar1b	84	90.598	Astyanax_mexicanus
ENSPREG00000005312	sar1b	90	85.354	ENSCSEG00000015238	sar1b	97	85.354	Cynoglossus_semilaevis
ENSPREG00000005312	sar1b	91	83.417	ENSCSEG00000016976	-	100	83.333	Cynoglossus_semilaevis
ENSPREG00000005312	sar1b	90	96.465	ENSCVAG00000022959	sar1b	100	96.465	Cyprinodon_variegatus
ENSPREG00000005312	sar1b	90	92.424	ENSDARG00000103403	sar1b	100	92.424	Danio_rerio
ENSPREG00000005312	sar1b	89	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSPREG00000005312	sar1b	88	88.021	ENSEBUG00000011723	sar1b	97	88.021	Eptatretus_burgeri
ENSPREG00000005312	sar1b	90	93.434	ENSELUG00000020912	sar1b	100	93.434	Esox_lucius
ENSPREG00000005312	sar1b	90	95.960	ENSFHEG00000019865	sar1b	100	95.960	Fundulus_heteroclitus
ENSPREG00000005312	sar1b	90	94.949	ENSGMOG00000008023	sar1b	100	94.949	Gadus_morhua
ENSPREG00000005312	sar1b	90	99.495	ENSGAFG00000007081	sar1b	100	99.495	Gambusia_affinis
ENSPREG00000005312	sar1b	90	91.919	ENSGACG00000001474	sar1b	100	91.919	Gasterosteus_aculeatus
ENSPREG00000005312	sar1b	90	83.838	ENSHBUG00000018397	-	100	83.838	Haplochromis_burtoni
ENSPREG00000005312	sar1b	90	94.444	ENSHBUG00000000915	sar1b	100	94.444	Haplochromis_burtoni
ENSPREG00000005312	sar1b	90	92.929	ENSHCOG00000010953	sar1b	100	92.929	Hippocampus_comes
ENSPREG00000005312	sar1b	90	90.909	ENSIPUG00000020925	sar1b	100	90.909	Ictalurus_punctatus
ENSPREG00000005312	sar1b	90	86.869	ENSIPUG00000010046	sar1b	100	86.869	Ictalurus_punctatus
ENSPREG00000005312	sar1b	90	93.939	ENSKMAG00000019693	sar1b	100	93.939	Kryptolebias_marmoratus
ENSPREG00000005312	sar1b	90	84.848	ENSKMAG00000014875	-	100	84.848	Kryptolebias_marmoratus
ENSPREG00000005312	sar1b	90	84.848	ENSLBEG00000016945	-	100	84.848	Labrus_bergylta
ENSPREG00000005312	sar1b	90	90.909	ENSLBEG00000027550	sar1b	100	90.909	Labrus_bergylta
ENSPREG00000005312	sar1b	90	74.372	ENSLACG00000017029	-	100	74.372	Latimeria_chalumnae
ENSPREG00000005312	sar1b	90	85.859	ENSLACG00000010795	sar1b	100	85.859	Latimeria_chalumnae
ENSPREG00000005312	sar1b	90	93.434	ENSLOCG00000010197	sar1b	100	93.434	Lepisosteus_oculatus
ENSPREG00000005312	sar1b	90	89.394	ENSLOCG00000005214	-	100	89.394	Lepisosteus_oculatus
ENSPREG00000005312	sar1b	95	91.787	ENSMAMG00000021732	sar1b	100	92.424	Mastacembelus_armatus
ENSPREG00000005312	sar1b	90	83.838	ENSMZEG00005001012	-	100	83.838	Maylandia_zebra
ENSPREG00000005312	sar1b	90	94.444	ENSMZEG00005008942	sar1b	100	94.444	Maylandia_zebra
ENSPREG00000005312	sar1b	82	91.061	ENSMGAG00000005387	-	91	91.061	Meleagris_gallopavo
ENSPREG00000005312	sar1b	90	83.333	ENSMMOG00000013803	-	100	83.333	Mola_mola
ENSPREG00000005312	sar1b	99	91.204	ENSMALG00000016635	sar1b	97	92.308	Monopterus_albus
ENSPREG00000005312	sar1b	90	93.939	ENSNBRG00000008013	sar1b	100	93.939	Neolamprologus_brichardi
ENSPREG00000005312	sar1b	90	83.838	ENSNBRG00000014004	-	100	83.838	Neolamprologus_brichardi
ENSPREG00000005312	sar1b	90	92.929	ENSONIG00000017278	sar1b	100	92.929	Oreochromis_niloticus
ENSPREG00000005312	sar1b	90	91.414	ENSORLG00000000932	sar1b	100	91.414	Oryzias_latipes
ENSPREG00000005312	sar1b	90	91.414	ENSORLG00020021985	sar1b	100	91.414	Oryzias_latipes_hni
ENSPREG00000005312	sar1b	90	91.414	ENSORLG00015007044	sar1b	100	91.414	Oryzias_latipes_hsok
ENSPREG00000005312	sar1b	90	92.424	ENSOMEG00000001052	sar1b	100	92.424	Oryzias_melastigma
ENSPREG00000005312	sar1b	90	92.424	ENSPKIG00000017353	-	100	92.424	Paramormyrops_kingsleyae
ENSPREG00000005312	sar1b	90	93.434	ENSPKIG00000010688	sar1b	100	93.434	Paramormyrops_kingsleyae
ENSPREG00000005312	sar1b	53	93.966	ENSPMGG00000001234	sar1b	91	93.966	Periophthalmus_magnuspinnatus
ENSPREG00000005312	sar1b	90	82.587	ENSPMAG00000003593	sar1b	100	82.587	Petromyzon_marinus
ENSPREG00000005312	sar1b	90	100.000	ENSPFOG00000005666	sar1b	100	100.000	Poecilia_formosa
ENSPREG00000005312	sar1b	90	98.990	ENSPLAG00000012223	sar1b	100	98.990	Poecilia_latipinna
ENSPREG00000005312	sar1b	53	85.470	ENSPLAG00000001016	-	75	85.470	Poecilia_latipinna
ENSPREG00000005312	sar1b	90	100.000	ENSPMEG00000016831	sar1b	100	100.000	Poecilia_mexicana
ENSPREG00000005312	sar1b	90	94.444	ENSPNYG00000012440	sar1b	100	94.444	Pundamilia_nyererei
ENSPREG00000005312	sar1b	90	83.838	ENSPNYG00000021357	-	100	83.838	Pundamilia_nyererei
ENSPREG00000005312	sar1b	90	92.929	ENSPNAG00000014683	sar1b	100	92.929	Pygocentrus_nattereri
ENSPREG00000005312	sar1b	90	85.859	ENSPNAG00000001123	-	100	85.859	Pygocentrus_nattereri
ENSPREG00000005312	sar1b	90	91.919	ENSSFOG00015018128	-	100	91.919	Scleropages_formosus
ENSPREG00000005312	sar1b	90	93.434	ENSSFOG00015020051	sar1b	100	93.434	Scleropages_formosus
ENSPREG00000005312	sar1b	99	78.802	ENSSMAG00000002165	-	100	84.343	Scophthalmus_maximus
ENSPREG00000005312	sar1b	98	88.318	ENSSMAG00000007106	sar1b	83	89.855	Scophthalmus_maximus
ENSPREG00000005312	sar1b	90	93.939	ENSSDUG00000020926	sar1b	100	93.939	Seriola_dumerili
ENSPREG00000005312	sar1b	91	83.417	ENSSDUG00000019629	-	100	83.838	Seriola_dumerili
ENSPREG00000005312	sar1b	90	83.838	ENSSLDG00000024197	-	100	83.838	Seriola_lalandi_dorsalis
ENSPREG00000005312	sar1b	90	93.939	ENSSLDG00000017052	sar1b	100	93.939	Seriola_lalandi_dorsalis
ENSPREG00000005312	sar1b	90	89.899	ENSSPUG00000010247	-	100	89.899	Sphenodon_punctatus
ENSPREG00000005312	sar1b	90	93.939	ENSSPAG00000017634	sar1b	100	93.939	Stegastes_partitus
ENSPREG00000005312	sar1b	90	83.838	ENSSPAG00000015626	-	100	83.838	Stegastes_partitus
ENSPREG00000005312	sar1b	90	87.374	ENSTRUG00000023908	sar1b	100	87.374	Takifugu_rubripes
ENSPREG00000005312	sar1b	90	89.899	ENSTNIG00000016097	sar1b	100	89.899	Tetraodon_nigroviridis
ENSPREG00000005312	sar1b	81	99.438	ENSXCOG00000004160	sar1b	87	99.438	Xiphophorus_couchianus
ENSPREG00000005312	sar1b	55	82.500	ENSXCOG00000006154	-	81	82.500	Xiphophorus_couchianus
ENSPREG00000005312	sar1b	90	99.495	ENSXMAG00000008294	sar1b	100	99.495	Xiphophorus_maculatus