EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005323 (Gene tree)
Gene ID: 103460653
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 10396 bases
Position: chrKK215322.1:75990-86385
Accession: 103460653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007773	MMR_HSR1	PF01926.23	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000007865	-	3785	XM_008402928	ENSPREP00000007773	209 (aa)	XP_008401150	UPI0004A2FA24

Gene Model

Click here to download ENSPREG00000005323's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005323	si:dkey-16l2.16	73	42.208	ENSPREG00000009535	RAB41	73	42.208
ENSPREG00000005323	si:dkey-16l2.16	82	45.349	ENSPREG00000019783	RAB15	82	45.349
ENSPREG00000005323	si:dkey-16l2.16	98	40.865	ENSPREG00000009605	rab11a	96	40.865
ENSPREG00000005323	si:dkey-16l2.16	76	36.420	ENSPREG00000008951	rab34a	66	36.420
ENSPREG00000005323	si:dkey-16l2.16	80	36.416	ENSPREG00000022241	si:dkey-13a21.4	84	36.416
ENSPREG00000005323	si:dkey-16l2.16	96	35.821	ENSPREG00000010146	rab5c	89	37.313
ENSPREG00000005323	si:dkey-16l2.16	60	30.496	ENSPREG00000019667	arfrp1	68	30.496
ENSPREG00000005323	si:dkey-16l2.16	83	31.250	ENSPREG00000012803	rhebl1	93	31.250
ENSPREG00000005323	si:dkey-16l2.16	73	31.646	ENSPREG00000010228	dnajc27	81	31.646
ENSPREG00000005323	si:dkey-16l2.16	96	33.333	ENSPREG00000012522	-	97	33.333
ENSPREG00000005323	si:dkey-16l2.16	77	32.515	ENSPREG00000016102	si:ch73-116o1.2	92	30.256
ENSPREG00000005323	si:dkey-16l2.16	78	44.512	ENSPREG00000017344	-	76	44.512
ENSPREG00000005323	si:dkey-16l2.16	81	39.766	ENSPREG00000022167	-	84	41.718
ENSPREG00000005323	si:dkey-16l2.16	98	39.713	ENSPREG00000006336	-	96	39.713
ENSPREG00000005323	si:dkey-16l2.16	74	44.970	ENSPREG00000000880	rab33ba	72	44.970
ENSPREG00000005323	si:dkey-16l2.16	81	45.930	ENSPREG00000013962	rab42a	79	45.930
ENSPREG00000005323	si:dkey-16l2.16	95	30.693	ENSPREG00000006363	rras	95	30.693
ENSPREG00000005323	si:dkey-16l2.16	98	37.981	ENSPREG00000017324	rab11al	96	37.981
ENSPREG00000005323	si:dkey-16l2.16	80	38.150	ENSPREG00000012148	RAB7A	83	38.150
ENSPREG00000005323	si:dkey-16l2.16	77	64.198	ENSPREG00000017517	zgc:171927	76	64.198
ENSPREG00000005323	si:dkey-16l2.16	73	34.868	ENSPREG00000014761	rabl2	74	34.868
ENSPREG00000005323	si:dkey-16l2.16	55	30.172	ENSPREG00000003600	arl3l2	59	30.172
ENSPREG00000005323	si:dkey-16l2.16	77	63.580	ENSPREG00000020321	rab1ab	80	63.580
ENSPREG00000005323	si:dkey-16l2.16	98	39.713	ENSPREG00000006357	rab11ba	75	39.713
ENSPREG00000005323	si:dkey-16l2.16	77	34.568	ENSPREG00000018287	KRAS	94	32.584
ENSPREG00000005323	si:dkey-16l2.16	96	35.885	ENSPREG00000001832	rab9a	97	35.885
ENSPREG00000005323	si:dkey-16l2.16	67	34.532	ENSPREG00000022509	rab23	78	33.750
ENSPREG00000005323	si:dkey-16l2.16	75	44.937	ENSPREG00000006119	rab25a	93	41.497
ENSPREG00000005323	si:dkey-16l2.16	72	30.061	ENSPREG00000013361	arl1	81	30.061
ENSPREG00000005323	si:dkey-16l2.16	55	30.159	ENSPREG00000021747	rasl10a	62	30.159
ENSPREG00000005323	si:dkey-16l2.16	77	38.509	ENSPREG00000010920	rab22a	83	38.509
ENSPREG00000005323	si:dkey-16l2.16	77	41.379	ENSPREG00000001864	-	75	41.379
ENSPREG00000005323	si:dkey-16l2.16	77	40.854	ENSPREG00000021505	rab6a	79	40.854
ENSPREG00000005323	si:dkey-16l2.16	80	40.237	ENSPREG00000010154	rab4a	79	40.237
ENSPREG00000005323	si:dkey-16l2.16	78	46.341	ENSPREG00000005923	rab18a	66	46.341
ENSPREG00000005323	si:dkey-16l2.16	84	38.333	ENSPREG00000015480	rab6ba	80	41.212
ENSPREG00000005323	si:dkey-16l2.16	78	35.542	ENSPREG00000019341	hrasb	87	35.542
ENSPREG00000005323	si:dkey-16l2.16	80	38.150	ENSPREG00000017750	RAB7A	83	38.150
ENSPREG00000005323	si:dkey-16l2.16	98	40.097	ENSPREG00000017337	rab25b	96	40.097
ENSPREG00000005323	si:dkey-16l2.16	79	44.643	ENSPREG00000009597	-	79	44.643
ENSPREG00000005323	si:dkey-16l2.16	97	33.493	ENSPREG00000020276	RAB29	99	33.493
ENSPREG00000005323	si:dkey-16l2.16	99	32.093	ENSPREG00000009813	rab34b	83	32.093
ENSPREG00000005323	si:dkey-16l2.16	87	47.802	ENSPREG00000017567	rab13	91	47.802
ENSPREG00000005323	si:dkey-16l2.16	56	30.328	ENSPREG00000004191	arl8ba	62	30.328
ENSPREG00000005323	si:dkey-16l2.16	77	61.111	ENSPREG00000003616	rab1ba	81	61.111
ENSPREG00000005323	si:dkey-16l2.16	82	40.462	ENSPREG00000017487	rab12	71	40.462
ENSPREG00000005323	si:dkey-16l2.16	76	46.341	ENSPREG00000007017	zgc:101559	70	46.341
ENSPREG00000005323	si:dkey-16l2.16	54	34.211	ENSPREG00000016664	rap2b	91	33.333
ENSPREG00000005323	si:dkey-16l2.16	85	45.506	ENSPREG00000014634	rab30	88	45.506
ENSPREG00000005323	si:dkey-16l2.16	79	44.048	ENSPREG00000007129	RAB39B	79	44.048
ENSPREG00000005323	si:dkey-16l2.16	84	48.588	ENSPREG00000010284	rab15	83	48.588
ENSPREG00000005323	si:dkey-16l2.16	81	36.571	ENSPREG00000006970	rab9b	79	36.571
ENSPREG00000005323	si:dkey-16l2.16	78	34.337	ENSPREG00000010752	rheb	89	34.337
ENSPREG00000005323	si:dkey-16l2.16	79	31.492	ENSPREG00000006055	rasl11a	69	31.492
ENSPREG00000005323	si:dkey-16l2.16	98	39.713	ENSPREG00000014269	rab11bb	96	39.713
ENSPREG00000005323	si:dkey-16l2.16	98	36.667	ENSPREG00000014888	rab2a	99	36.667
ENSPREG00000005323	si:dkey-16l2.16	83	58.889	ENSPREG00000004889	-	86	58.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005323	si:dkey-16l2.16	100	86.603	ENSAPOG00000008263	si:dkey-16l2.16	100	86.603	Acanthochromis_polyacanthus
ENSPREG00000005323	si:dkey-16l2.16	100	88.038	ENSAOCG00000016825	si:dkey-16l2.16	100	88.038	Amphiprion_ocellaris
ENSPREG00000005323	si:dkey-16l2.16	100	88.038	ENSAPEG00000006500	si:dkey-16l2.16	100	88.038	Amphiprion_percula
ENSPREG00000005323	si:dkey-16l2.16	100	88.038	ENSATEG00000019238	si:dkey-16l2.16	100	88.038	Anabas_testudineus
ENSPREG00000005323	si:dkey-16l2.16	100	88.517	ENSACLG00000018721	si:dkey-16l2.16	100	88.517	Astatotilapia_calliptera
ENSPREG00000005323	si:dkey-16l2.16	100	87.081	ENSAMXG00000038243	si:dkey-16l2.16	94	96.610	Astyanax_mexicanus
ENSPREG00000005323	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSPREG00000005323	si:dkey-16l2.16	100	91.866	ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	Cyprinodon_variegatus
ENSPREG00000005323	si:dkey-16l2.16	100	86.124	ENSDARG00000037967	si:dkey-16l2.16	99	95.763	Danio_rerio
ENSPREG00000005323	si:dkey-16l2.16	99	81.731	ENSELUG00000023247	si:dkey-16l2.16	99	81.731	Esox_lucius
ENSPREG00000005323	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSPREG00000005323	si:dkey-16l2.16	77	83.851	ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	Gadus_morhua
ENSPREG00000005323	si:dkey-16l2.16	100	99.043	ENSGAFG00000005388	si:dkey-16l2.16	100	99.043	Gambusia_affinis
ENSPREG00000005323	si:dkey-16l2.16	100	86.603	ENSGACG00000014915	si:dkey-16l2.16	98	86.603	Gasterosteus_aculeatus
ENSPREG00000005323	si:dkey-16l2.16	100	88.995	ENSHBUG00000019261	si:dkey-16l2.16	100	88.995	Haplochromis_burtoni
ENSPREG00000005323	si:dkey-16l2.16	100	87.081	ENSHCOG00000006538	si:dkey-16l2.16	100	87.081	Hippocampus_comes
ENSPREG00000005323	si:dkey-16l2.16	100	86.603	ENSKMAG00000003494	si:dkey-16l2.16	100	86.603	Kryptolebias_marmoratus
ENSPREG00000005323	si:dkey-16l2.16	100	88.517	ENSLBEG00000007681	si:dkey-16l2.16	100	88.517	Labrus_bergylta
ENSPREG00000005323	si:dkey-16l2.16	100	88.517	ENSMAMG00000019230	si:dkey-16l2.16	100	88.517	Mastacembelus_armatus
ENSPREG00000005323	si:dkey-16l2.16	100	88.517	ENSMZEG00005002081	si:dkey-16l2.16	100	88.517	Maylandia_zebra
ENSPREG00000005323	si:dkey-16l2.16	99	87.864	ENSMMOG00000020140	si:dkey-16l2.16	97	87.864	Mola_mola
ENSPREG00000005323	si:dkey-16l2.16	100	87.560	ENSMALG00000014727	si:dkey-16l2.16	99	87.560	Monopterus_albus
ENSPREG00000005323	si:dkey-16l2.16	100	88.038	ENSNBRG00000008930	si:dkey-16l2.16	100	88.038	Neolamprologus_brichardi
ENSPREG00000005323	si:dkey-16l2.16	100	88.517	ENSONIG00000009443	si:dkey-16l2.16	100	88.517	Oreochromis_niloticus
ENSPREG00000005323	si:dkey-16l2.16	100	84.689	ENSORLG00000001098	si:dkey-16l2.16	99	84.689	Oryzias_latipes
ENSPREG00000005323	si:dkey-16l2.16	100	84.689	ENSORLG00020000867	si:dkey-16l2.16	99	84.689	Oryzias_latipes_hni
ENSPREG00000005323	si:dkey-16l2.16	100	85.167	ENSOMEG00000015474	si:dkey-16l2.16	100	86.124	Oryzias_melastigma
ENSPREG00000005323	si:dkey-16l2.16	100	85.167	ENSPKIG00000005686	-	100	85.167	Paramormyrops_kingsleyae
ENSPREG00000005323	si:dkey-16l2.16	100	76.077	ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	Paramormyrops_kingsleyae
ENSPREG00000005323	si:dkey-16l2.16	100	87.560	ENSPMGG00000000751	si:dkey-16l2.16	100	87.560	Periophthalmus_magnuspinnatus
ENSPREG00000005323	si:dkey-16l2.16	100	99.522	ENSPFOG00000004746	si:dkey-16l2.16	100	99.522	Poecilia_formosa
ENSPREG00000005323	si:dkey-16l2.16	100	99.522	ENSPLAG00000021043	si:dkey-16l2.16	100	99.522	Poecilia_latipinna
ENSPREG00000005323	si:dkey-16l2.16	100	99.522	ENSPMEG00000007165	si:dkey-16l2.16	100	99.522	Poecilia_mexicana
ENSPREG00000005323	si:dkey-16l2.16	100	88.995	ENSPNYG00000009490	si:dkey-16l2.16	100	88.995	Pundamilia_nyererei
ENSPREG00000005323	si:dkey-16l2.16	100	87.560	ENSPNAG00000018986	si:dkey-16l2.16	100	87.560	Pygocentrus_nattereri
ENSPREG00000005323	si:dkey-16l2.16	100	86.124	ENSSFOG00015021448	-	100	86.124	Scleropages_formosus
ENSPREG00000005323	si:dkey-16l2.16	99	76.923	ENSSFOG00015006414	-	99	76.923	Scleropages_formosus
ENSPREG00000005323	si:dkey-16l2.16	100	84.689	ENSSMAG00000011769	si:dkey-16l2.16	94	84.689	Scophthalmus_maximus
ENSPREG00000005323	si:dkey-16l2.16	100	89.952	ENSSDUG00000005719	si:dkey-16l2.16	100	89.952	Seriola_dumerili
ENSPREG00000005323	si:dkey-16l2.16	100	89.952	ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	Seriola_lalandi_dorsalis
ENSPREG00000005323	si:dkey-16l2.16	100	88.995	ENSSPAG00000006302	si:dkey-16l2.16	100	88.995	Stegastes_partitus
ENSPREG00000005323	si:dkey-16l2.16	100	88.038	ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	Takifugu_rubripes
ENSPREG00000005323	si:dkey-16l2.16	100	88.995	ENSTNIG00000011300	si:dkey-16l2.16	100	88.995	Tetraodon_nigroviridis
ENSPREG00000005323	si:dkey-16l2.16	100	99.043	ENSXMAG00000021767	si:dkey-16l2.16	100	99.043	Xiphophorus_maculatus