EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005453 (Gene tree)
Gene ID: 103477816
Gene Symbol: zc3h12a
Alias: -
Full Name: zinc finger CCCH-type containing 12A
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 5861 bases
Position: chrLG16:8533025-8538885
Accession: 103477816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007947	RNase_Zc3h12a	PF11977.8	5.7e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008040	-	1949	XM_008431120	ENSPREP00000007947	623 (aa)	XP_008429342	UPI0004A21956

Gene Model

Click here to download ENSPREG00000005453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005453's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005453	zc3h12a	55	57.382	ENSPREG00000001607	-	73	60.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005453	zc3h12a	96	38.400	ENSAPOG00000005848	-	94	39.206	Acanthochromis_polyacanthus
ENSPREG00000005453	zc3h12a	100	65.312	ENSAPOG00000024328	zc3h12a	100	65.312	Acanthochromis_polyacanthus
ENSPREG00000005453	zc3h12a	65	52.732	ENSAMEG00000000991	ZC3H12A	92	42.788	Ailuropoda_melanoleuca
ENSPREG00000005453	zc3h12a	97	66.290	ENSACIG00000017750	zc3h12a	99	66.452	Amphilophus_citrinellus
ENSPREG00000005453	zc3h12a	96	44.372	ENSACIG00000004135	si:dkey-206d17.12	79	61.111	Amphilophus_citrinellus
ENSPREG00000005453	zc3h12a	53	55.589	ENSACIG00000006790	-	92	44.295	Amphilophus_citrinellus
ENSPREG00000005453	zc3h12a	96	38.389	ENSAOCG00000009106	-	94	39.873	Amphiprion_ocellaris
ENSPREG00000005453	zc3h12a	100	64.789	ENSAOCG00000014937	zc3h12a	100	64.789	Amphiprion_ocellaris
ENSPREG00000005453	zc3h12a	100	64.789	ENSAPEG00000006072	zc3h12a	100	64.789	Amphiprion_percula
ENSPREG00000005453	zc3h12a	96	38.863	ENSAPEG00000004229	-	94	39.873	Amphiprion_percula
ENSPREG00000005453	zc3h12a	68	62.829	ENSATEG00000002260	-	83	61.373	Anabas_testudineus
ENSPREG00000005453	zc3h12a	97	43.381	ENSATEG00000006140	si:dkey-206d17.12	85	51.282	Anabas_testudineus
ENSPREG00000005453	zc3h12a	100	61.346	ENSATEG00000009946	zc3h12a	100	61.502	Anabas_testudineus
ENSPREG00000005453	zc3h12a	97	42.249	ENSACLG00000004488	si:dkey-206d17.12	90	43.730	Astatotilapia_calliptera
ENSPREG00000005453	zc3h12a	100	63.281	ENSACLG00000027801	zc3h12a	100	63.281	Astatotilapia_calliptera
ENSPREG00000005453	zc3h12a	95	39.216	ENSAMXG00000030754	-	98	39.216	Astyanax_mexicanus
ENSPREG00000005453	zc3h12a	96	46.372	ENSAMXG00000001736	zc3h12a	99	46.372	Astyanax_mexicanus
ENSPREG00000005453	zc3h12a	65	54.048	ENSBTAG00000011316	ZC3H12A	95	43.883	Bos_taurus
ENSPREG00000005453	zc3h12a	65	53.428	ENSCAFG00000003304	ZC3H12A	94	44.935	Canis_familiaris
ENSPREG00000005453	zc3h12a	65	53.428	ENSCAFG00020008620	ZC3H12A	94	44.935	Canis_lupus_dingo
ENSPREG00000005453	zc3h12a	96	42.995	ENSCHIG00000021957	ZC3H12A	95	43.730	Capra_hircus
ENSPREG00000005453	zc3h12a	50	63.259	ENSTSYG00000035959	ZC3H12A	92	43.115	Carlito_syrichta
ENSPREG00000005453	zc3h12a	96	42.812	ENSCAPG00000015365	ZC3H12A	99	43.791	Cavia_aperea
ENSPREG00000005453	zc3h12a	96	42.652	ENSCPOG00000011081	ZC3H12A	99	43.627	Cavia_porcellus
ENSPREG00000005453	zc3h12a	68	65.161	ENSCLAG00000008722	ZC3H12A	93	44.265	Chinchilla_lanigera
ENSPREG00000005453	zc3h12a	98	43.692	ENSCPBG00000018492	ZC3H12A	92	43.692	Chrysemys_picta_bellii
ENSPREG00000005453	zc3h12a	96	43.994	ENSCGRG00001015497	Zc3h12a	92	43.780	Cricetulus_griseus_chok1gshd
ENSPREG00000005453	zc3h12a	96	43.994	ENSCGRG00000013149	Zc3h12a	92	43.780	Cricetulus_griseus_crigri
ENSPREG00000005453	zc3h12a	51	58.434	ENSCSEG00000010073	-	80	58.264	Cynoglossus_semilaevis
ENSPREG00000005453	zc3h12a	97	41.890	ENSCSEG00000010348	si:dkey-206d17.12	90	41.890	Cynoglossus_semilaevis
ENSPREG00000005453	zc3h12a	98	56.452	ENSCSEG00000019043	zc3h12a	96	56.452	Cynoglossus_semilaevis
ENSPREG00000005453	zc3h12a	96	38.182	ENSCVAG00000001077	-	86	51.899	Cyprinodon_variegatus
ENSPREG00000005453	zc3h12a	96	42.370	ENSCVAG00000001516	si:dkey-206d17.12	91	42.788	Cyprinodon_variegatus
ENSPREG00000005453	zc3h12a	99	76.837	ENSCVAG00000017420	zc3h12a	99	76.837	Cyprinodon_variegatus
ENSPREG00000005453	zc3h12a	99	45.171	ENSDARG00000101034	si:dkey-206d17.12	91	45.483	Danio_rerio
ENSPREG00000005453	zc3h12a	51	60.671	ENSDNOG00000035006	ZC3H12A	93	42.857	Dasypus_novemcinctus
ENSPREG00000005453	zc3h12a	65	53.176	ENSDORG00000012666	Zc3h12a	92	42.834	Dipodomys_ordii
ENSPREG00000005453	zc3h12a	51	50.152	ENSETEG00000018311	ZC3H12A	83	44.365	Echinops_telfairi
ENSPREG00000005453	zc3h12a	82	53.682	ENSEASG00005012220	ZC3H12A	95	43.750	Equus_asinus_asinus
ENSPREG00000005453	zc3h12a	82	53.037	ENSECAG00000009562	ZC3H12A	90	43.910	Equus_caballus
ENSPREG00000005453	zc3h12a	97	50.156	ENSELUG00000018274	zc3h12a	97	50.156	Esox_lucius
ENSPREG00000005453	zc3h12a	96	45.283	ENSELUG00000007368	si:dkey-206d17.12	93	45.283	Esox_lucius
ENSPREG00000005453	zc3h12a	65	54.390	ENSFCAG00000008757	ZC3H12A	92	43.543	Felis_catus
ENSPREG00000005453	zc3h12a	96	46.614	ENSFALG00000000890	ZC3H12A	97	47.604	Ficedula_albicollis
ENSPREG00000005453	zc3h12a	100	76.358	ENSFHEG00000001019	zc3h12a	100	76.358	Fundulus_heteroclitus
ENSPREG00000005453	zc3h12a	97	38.596	ENSFHEG00000011425	-	99	38.756	Fundulus_heteroclitus
ENSPREG00000005453	zc3h12a	96	41.503	ENSFHEG00000001174	si:dkey-206d17.12	93	41.993	Fundulus_heteroclitus
ENSPREG00000005453	zc3h12a	96	47.452	ENSGMOG00000007388	-	100	47.903	Gadus_morhua
ENSPREG00000005453	zc3h12a	97	47.442	ENSGALG00000002021	ZC3H12A	89	47.442	Gallus_gallus
ENSPREG00000005453	zc3h12a	100	90.256	ENSGAFG00000008480	zc3h12a	100	90.735	Gambusia_affinis
ENSPREG00000005453	zc3h12a	70	61.639	ENSGAFG00000019001	si:dkey-206d17.12	79	61.639	Gambusia_affinis
ENSPREG00000005453	zc3h12a	98	56.019	ENSGACG00000013859	zc3h12a	99	56.019	Gasterosteus_aculeatus
ENSPREG00000005453	zc3h12a	96	42.995	ENSGACG00000002341	si:dkey-206d17.12	96	42.995	Gasterosteus_aculeatus
ENSPREG00000005453	zc3h12a	98	43.505	ENSGAGG00000003881	ZC3H12A	92	43.505	Gopherus_agassizii
ENSPREG00000005453	zc3h12a	97	42.658	ENSHBUG00000017076	si:dkey-206d17.12	90	44.320	Haplochromis_burtoni
ENSPREG00000005453	zc3h12a	100	63.125	ENSHBUG00000009356	zc3h12a	100	63.125	Haplochromis_burtoni
ENSPREG00000005453	zc3h12a	65	52.955	ENSHGLG00000012808	ZC3H12A	93	43.291	Heterocephalus_glaber_female
ENSPREG00000005453	zc3h12a	65	52.482	ENSHGLG00100002244	ZC3H12A	93	42.424	Heterocephalus_glaber_male
ENSPREG00000005453	zc3h12a	63	61.812	ENSHCOG00000004255	si:dkey-206d17.12	92	58.025	Hippocampus_comes
ENSPREG00000005453	zc3h12a	97	46.522	ENSIPUG00000015158	Zc3h12a	99	47.214	Ictalurus_punctatus
ENSPREG00000005453	zc3h12a	96	44.603	ENSIPUG00000005852	si:dkey-206d17.12	89	44.603	Ictalurus_punctatus
ENSPREG00000005453	zc3h12a	96	39.052	ENSIPUG00000011663	-	99	39.052	Ictalurus_punctatus
ENSPREG00000005453	zc3h12a	65	54.458	ENSSTOG00000026842	ZC3H12A	92	44.517	Ictidomys_tridecemlineatus
ENSPREG00000005453	zc3h12a	96	44.209	ENSJJAG00000004252	Zc3h12a	92	44.535	Jaculus_jaculus
ENSPREG00000005453	zc3h12a	97	65.747	ENSKMAG00000013650	zc3h12a	98	65.747	Kryptolebias_marmoratus
ENSPREG00000005453	zc3h12a	50	54.430	ENSKMAG00000014401	-	58	54.430	Kryptolebias_marmoratus
ENSPREG00000005453	zc3h12a	100	62.069	ENSLBEG00000027429	zc3h12a	100	62.069	Labrus_bergylta
ENSPREG00000005453	zc3h12a	97	39.144	ENSLBEG00000017593	si:dkey-206d17.12	97	38.915	Labrus_bergylta
ENSPREG00000005453	zc3h12a	97	45.669	ENSLACG00000017365	ZC3H12A	94	45.669	Latimeria_chalumnae
ENSPREG00000005453	zc3h12a	98	47.096	ENSLOCG00000003232	si:dkey-206d17.12	94	46.939	Lepisosteus_oculatus
ENSPREG00000005453	zc3h12a	51	62.385	ENSLAFG00000018720	ZC3H12A	92	43.598	Loxodonta_africana
ENSPREG00000005453	zc3h12a	98	38.863	ENSMAMG00000004463	-	83	57.018	Mastacembelus_armatus
ENSPREG00000005453	zc3h12a	95	40.644	ENSMAMG00000004483	si:dkey-206d17.12	89	40.644	Mastacembelus_armatus
ENSPREG00000005453	zc3h12a	100	63.981	ENSMAMG00000007494	zc3h12a	100	63.981	Mastacembelus_armatus
ENSPREG00000005453	zc3h12a	100	63.281	ENSMZEG00005006997	zc3h12a	100	63.281	Maylandia_zebra
ENSPREG00000005453	zc3h12a	97	42.249	ENSMZEG00005026287	si:dkey-206d17.12	90	43.730	Maylandia_zebra
ENSPREG00000005453	zc3h12a	97	46.677	ENSMGAG00000003371	ZC3H12A	97	46.677	Meleagris_gallopavo
ENSPREG00000005453	zc3h12a	96	44.156	ENSMAUG00000012893	Zc3h12a	92	44.156	Mesocricetus_auratus
ENSPREG00000005453	zc3h12a	96	44.426	ENSMOCG00000001899	Zc3h12a	92	44.426	Microtus_ochrogaster
ENSPREG00000005453	zc3h12a	96	43.021	ENSMMOG00000013604	si:dkey-206d17.12	97	42.788	Mola_mola
ENSPREG00000005453	zc3h12a	98	59.520	ENSMMOG00000000727	zc3h12a	99	59.520	Mola_mola
ENSPREG00000005453	zc3h12a	74	54.167	ENSMODG00000017794	ZC3H12A	92	46.388	Monodelphis_domestica
ENSPREG00000005453	zc3h12a	96	42.022	ENSMALG00000012794	si:dkey-206d17.12	96	42.047	Monopterus_albus
ENSPREG00000005453	zc3h12a	100	62.009	ENSMALG00000012319	zc3h12a	100	62.009	Monopterus_albus
ENSPREG00000005453	zc3h12a	66	52.765	MGP_CAROLIEiJ_G0026462	Zc3h12a	94	43.492	Mus_caroli
ENSPREG00000005453	zc3h12a	66	52.874	ENSMUSG00000042677	Zc3h12a	94	43.740	Mus_musculus
ENSPREG00000005453	zc3h12a	65	53.521	MGP_PahariEiJ_G0028793	Zc3h12a	92	43.569	Mus_pahari
ENSPREG00000005453	zc3h12a	66	53.103	MGP_SPRETEiJ_G0027441	Zc3h12a	84	62.963	Mus_spretus
ENSPREG00000005453	zc3h12a	65	53.222	ENSMPUG00000014758	ZC3H12A	96	43.791	Mustela_putorius_furo
ENSPREG00000005453	zc3h12a	50	63.009	ENSMLUG00000027279	ZC3H12A	92	43.087	Myotis_lucifugus
ENSPREG00000005453	zc3h12a	96	44.156	ENSNGAG00000018725	Zc3h12a	93	44.156	Nannospalax_galili
ENSPREG00000005453	zc3h12a	100	62.500	ENSNBRG00000009607	zc3h12a	100	62.500	Neolamprologus_brichardi
ENSPREG00000005453	zc3h12a	97	42.097	ENSNBRG00000014376	si:dkey-206d17.12	98	43.740	Neolamprologus_brichardi
ENSPREG00000005453	zc3h12a	95	33.279	ENSMEUG00000003389	ZC3H12A	99	33.279	Notamacropus_eugenii
ENSPREG00000005453	zc3h12a	97	43.780	ENSODEG00000005643	ZC3H12A	93	43.770	Octodon_degus
ENSPREG00000005453	zc3h12a	100	58.425	ENSONIG00000016235	zc3h12a	100	58.425	Oreochromis_niloticus
ENSPREG00000005453	zc3h12a	97	43.436	ENSONIG00000013685	si:dkey-206d17.12	99	43.922	Oreochromis_niloticus
ENSPREG00000005453	zc3h12a	97	43.863	ENSOANG00000002060	ZC3H12A	89	43.863	Ornithorhynchus_anatinus
ENSPREG00000005453	zc3h12a	51	62.805	ENSOCUG00000010856	ZC3H12A	82	62.805	Oryctolagus_cuniculus
ENSPREG00000005453	zc3h12a	100	60.731	ENSORLG00000014448	zc3h12a	98	60.731	Oryzias_latipes
ENSPREG00000005453	zc3h12a	50	55.128	ENSORLG00000015280	-	57	55.128	Oryzias_latipes
ENSPREG00000005453	zc3h12a	50	55.128	ENSORLG00020008580	-	53	52.888	Oryzias_latipes_hni
ENSPREG00000005453	zc3h12a	96	42.139	ENSORLG00020016107	-	98	42.276	Oryzias_latipes_hni
ENSPREG00000005453	zc3h12a	100	59.936	ENSORLG00020019555	zc3h12a	98	59.936	Oryzias_latipes_hni
ENSPREG00000005453	zc3h12a	100	59.300	ENSORLG00015004539	zc3h12a	91	59.300	Oryzias_latipes_hsok
ENSPREG00000005453	zc3h12a	50	54.808	ENSORLG00015003680	-	53	52.584	Oryzias_latipes_hsok
ENSPREG00000005453	zc3h12a	55	63.051	ENSOMEG00000005602	si:dkey-206d17.12	61	63.051	Oryzias_melastigma
ENSPREG00000005453	zc3h12a	100	60.835	ENSOMEG00000000483	zc3h12a	96	60.835	Oryzias_melastigma
ENSPREG00000005453	zc3h12a	54	60.057	ENSOARG00000019760	ZC3H12A	77	60.057	Ovis_aries
ENSPREG00000005453	zc3h12a	65	54.458	ENSPPRG00000014359	ZC3H12A	92	43.678	Panthera_pardus
ENSPREG00000005453	zc3h12a	65	54.390	ENSPTIG00000012943	ZC3H12A	84	62.753	Panthera_tigris_altaica
ENSPREG00000005453	zc3h12a	97	48.504	ENSPKIG00000004769	zc3h12a	93	48.819	Paramormyrops_kingsleyae
ENSPREG00000005453	zc3h12a	96	45.584	ENSPSIG00000009198	ZC3H12A	99	45.584	Pelodiscus_sinensis
ENSPREG00000005453	zc3h12a	83	39.434	ENSPMGG00000015418	-	97	39.245	Periophthalmus_magnuspinnatus
ENSPREG00000005453	zc3h12a	98	52.110	ENSPMGG00000004114	zc3h12a	99	52.110	Periophthalmus_magnuspinnatus
ENSPREG00000005453	zc3h12a	96	43.296	ENSPEMG00000024080	Zc3h12a	92	43.296	Peromyscus_maniculatus_bairdii
ENSPREG00000005453	zc3h12a	100	92.982	ENSPFOG00000013935	zc3h12a	100	93.142	Poecilia_formosa
ENSPREG00000005453	zc3h12a	73	37.901	ENSPFOG00000002933	si:dkey-206d17.12	99	37.901	Poecilia_formosa
ENSPREG00000005453	zc3h12a	100	93.142	ENSPLAG00000020965	zc3h12a	100	93.461	Poecilia_latipinna
ENSPREG00000005453	zc3h12a	73	38.116	ENSPLAG00000016243	si:dkey-206d17.12	90	38.116	Poecilia_latipinna
ENSPREG00000005453	zc3h12a	96	41.914	ENSPMEG00000011188	si:dkey-206d17.12	93	41.914	Poecilia_mexicana
ENSPREG00000005453	zc3h12a	100	93.301	ENSPMEG00000013674	zc3h12a	100	93.461	Poecilia_mexicana
ENSPREG00000005453	zc3h12a	50	63.836	ENSPCOG00000015837	ZC3H12A	92	43.089	Propithecus_coquereli
ENSPREG00000005453	zc3h12a	97	42.249	ENSPNYG00000003297	si:dkey-206d17.12	90	43.780	Pundamilia_nyererei
ENSPREG00000005453	zc3h12a	100	63.224	ENSPNYG00000013534	zc3h12a	100	63.224	Pundamilia_nyererei
ENSPREG00000005453	zc3h12a	97	47.087	ENSPNAG00000015494	zc3h12a	98	47.087	Pygocentrus_nattereri
ENSPREG00000005453	zc3h12a	95	40.729	ENSPNAG00000012124	-	97	40.729	Pygocentrus_nattereri
ENSPREG00000005453	zc3h12a	96	45.968	ENSPNAG00000010952	si:dkey-206d17.12	88	45.968	Pygocentrus_nattereri
ENSPREG00000005453	zc3h12a	66	53.226	ENSRNOG00000009131	Zc3h12a	94	43.651	Rattus_norvegicus
ENSPREG00000005453	zc3h12a	80	45.753	ENSSHAG00000011780	-	99	46.139	Sarcophilus_harrisii
ENSPREG00000005453	zc3h12a	83	49.338	ENSSFOG00015005925	zc3h12a	97	48.535	Scleropages_formosus
ENSPREG00000005453	zc3h12a	96	38.710	ENSSMAG00000017632	-	99	38.710	Scophthalmus_maximus
ENSPREG00000005453	zc3h12a	96	41.827	ENSSMAG00000001367	si:dkey-206d17.12	90	41.521	Scophthalmus_maximus
ENSPREG00000005453	zc3h12a	100	64.420	ENSSMAG00000005140	zc3h12a	99	64.734	Scophthalmus_maximus
ENSPREG00000005453	zc3h12a	51	59.692	ENSSDUG00000013237	-	90	50.000	Seriola_dumerili
ENSPREG00000005453	zc3h12a	100	63.950	ENSSDUG00000009879	zc3h12a	100	63.950	Seriola_dumerili
ENSPREG00000005453	zc3h12a	96	43.513	ENSSDUG00000007162	si:dkey-206d17.12	90	43.513	Seriola_dumerili
ENSPREG00000005453	zc3h12a	97	37.910	ENSSDUG00000010581	-	84	54.825	Seriola_dumerili
ENSPREG00000005453	zc3h12a	100	63.166	ENSSLDG00000003826	zc3h12a	100	63.166	Seriola_lalandi_dorsalis
ENSPREG00000005453	zc3h12a	96	39.394	ENSSLDG00000022022	-	93	39.394	Seriola_lalandi_dorsalis
ENSPREG00000005453	zc3h12a	97	44.635	ENSSPUG00000003668	ZC3H12A	87	44.635	Sphenodon_punctatus
ENSPREG00000005453	zc3h12a	100	64.929	ENSSPAG00000012466	zc3h12a	100	64.929	Stegastes_partitus
ENSPREG00000005453	zc3h12a	96	43.910	ENSSPAG00000020938	si:dkey-206d17.12	94	44.767	Stegastes_partitus
ENSPREG00000005453	zc3h12a	85	53.396	ENSSSCG00000037815	ZC3H12A	95	44.231	Sus_scrofa
ENSPREG00000005453	zc3h12a	82	48.462	ENSTGUG00000001563	ZC3H12A	98	48.462	Taeniopygia_guttata
ENSPREG00000005453	zc3h12a	96	42.283	ENSTRUG00000010565	si:dkey-206d17.12	97	42.283	Takifugu_rubripes
ENSPREG00000005453	zc3h12a	53	61.512	ENSTNIG00000001274	si:dkey-206d17.12	99	41.488	Tetraodon_nigroviridis
ENSPREG00000005453	zc3h12a	68	62.195	ENSTTRG00000008591	ZC3H12A	92	43.719	Tursiops_truncatus
ENSPREG00000005453	zc3h12a	65	52.194	ENSUAMG00000014105	ZC3H12A	92	42.788	Ursus_americanus
ENSPREG00000005453	zc3h12a	65	51.963	ENSUMAG00000001122	ZC3H12A	95	42.626	Ursus_maritimus
ENSPREG00000005453	zc3h12a	65	53.191	ENSVVUG00000023171	ZC3H12A	94	44.771	Vulpes_vulpes
ENSPREG00000005453	zc3h12a	96	44.268	ENSXETG00000011465	zc3h12a	99	44.268	Xenopus_tropicalis
ENSPREG00000005453	zc3h12a	89	90.644	ENSXCOG00000008984	zc3h12a	100	93.671	Xiphophorus_couchianus
ENSPREG00000005453	zc3h12a	100	91.534	ENSXMAG00000014646	zc3h12a	100	92.013	Xiphophorus_maculatus
ENSPREG00000005453	zc3h12a	55	56.863	ENSXMAG00000014715	-	83	61.638	Xiphophorus_maculatus
ENSPREG00000005453	zc3h12a	96	42.270	ENSXMAG00000025043	si:dkey-206d17.12	93	42.270	Xiphophorus_maculatus