EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005456 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3465 bases
Position: chrKK216121.1:791-4255
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007955	RVT_1	PF00078.27	1.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008048	-	3465	-	ENSPREP00000007955	1154 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005456	-	92	48.792	ENSPREG00000012484	-	94	48.792
ENSPREG00000005456	-	94	83.889	ENSPREG00000005756	-	99	83.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005456	-	91	36.544	ENSACIG00000012161	-	93	36.544	Amphilophus_citrinellus
ENSPREG00000005456	-	95	38.441	ENSACIG00000007038	-	97	38.441	Amphilophus_citrinellus
ENSPREG00000005456	-	79	38.296	ENSACIG00000013116	-	90	38.105	Amphilophus_citrinellus
ENSPREG00000005456	-	73	40.233	ENSACIG00000009025	-	97	40.233	Amphilophus_citrinellus
ENSPREG00000005456	-	80	39.250	ENSACIG00000010787	-	91	39.250	Amphilophus_citrinellus
ENSPREG00000005456	-	80	38.584	ENSAMXG00000042811	-	80	38.584	Astyanax_mexicanus
ENSPREG00000005456	-	83	37.442	ENSCPBG00000003842	-	73	37.442	Chrysemys_picta_bellii
ENSPREG00000005456	-	88	37.196	ENSCVAG00000004138	-	98	37.196	Cyprinodon_variegatus
ENSPREG00000005456	-	82	32.463	ENSELUG00000004597	-	97	32.463	Esox_lucius
ENSPREG00000005456	-	81	30.758	ENSELUG00000004618	-	87	30.606	Esox_lucius
ENSPREG00000005456	-	90	37.370	ENSFHEG00000002865	-	92	37.370	Fundulus_heteroclitus
ENSPREG00000005456	-	89	39.504	ENSFHEG00000022106	-	96	39.504	Fundulus_heteroclitus
ENSPREG00000005456	-	97	36.242	ENSFHEG00000002853	-	95	37.192	Fundulus_heteroclitus
ENSPREG00000005456	-	83	40.947	ENSFHEG00000007211	-	98	39.499	Fundulus_heteroclitus
ENSPREG00000005456	-	50	38.370	ENSGMOG00000005227	-	99	38.370	Gadus_morhua
ENSPREG00000005456	-	89	34.257	ENSHCOG00000007397	-	94	34.257	Hippocampus_comes
ENSPREG00000005456	-	89	34.803	ENSHCOG00000007389	-	95	34.803	Hippocampus_comes
ENSPREG00000005456	-	92	31.838	ENSHCOG00000000471	-	95	31.838	Hippocampus_comes
ENSPREG00000005456	-	89	30.620	ENSHCOG00000007436	-	99	30.620	Hippocampus_comes
ENSPREG00000005456	-	61	40.650	ENSLBEG00000006732	-	86	40.650	Labrus_bergylta
ENSPREG00000005456	-	61	40.650	ENSLBEG00000004576	-	86	40.650	Labrus_bergylta
ENSPREG00000005456	-	69	37.841	ENSLBEG00000003745	-	90	37.841	Labrus_bergylta
ENSPREG00000005456	-	67	31.931	ENSLACG00000006357	-	99	31.931	Latimeria_chalumnae
ENSPREG00000005456	-	50	31.749	ENSLACG00000009240	-	100	31.749	Latimeria_chalumnae
ENSPREG00000005456	-	87	32.661	ENSLOCG00000017064	-	98	32.661	Lepisosteus_oculatus
ENSPREG00000005456	-	87	32.805	ENSLOCG00000011928	-	99	32.805	Lepisosteus_oculatus
ENSPREG00000005456	-	87	36.862	ENSMAMG00000019985	-	90	37.047	Mastacembelus_armatus
ENSPREG00000005456	-	93	38.251	ENSONIG00000020875	-	94	38.251	Oreochromis_niloticus
ENSPREG00000005456	-	88	34.425	ENSOMEG00000015368	-	99	34.799	Oryzias_melastigma
ENSPREG00000005456	-	81	35.624	ENSPMGG00000017392	-	98	35.624	Periophthalmus_magnuspinnatus
ENSPREG00000005456	-	77	40.033	ENSPMGG00000001593	-	93	40.033	Periophthalmus_magnuspinnatus
ENSPREG00000005456	-	90	48.470	ENSPLAG00000022994	-	97	48.470	Poecilia_latipinna
ENSPREG00000005456	-	71	50.604	ENSPLAG00000023379	-	99	50.604	Poecilia_latipinna
ENSPREG00000005456	-	88	48.400	ENSPLAG00000011810	-	95	48.400	Poecilia_latipinna
ENSPREG00000005456	-	87	46.521	ENSPLAG00000011817	-	99	46.521	Poecilia_latipinna
ENSPREG00000005456	-	91	47.003	ENSPMEG00000003431	-	99	47.003	Poecilia_mexicana
ENSPREG00000005456	-	92	45.251	ENSPMEG00000008574	-	99	45.251	Poecilia_mexicana
ENSPREG00000005456	-	69	37.042	ENSPNAG00000007038	-	69	37.042	Pygocentrus_nattereri
ENSPREG00000005456	-	81	37.157	ENSPNAG00000003539	-	77	37.157	Pygocentrus_nattereri
ENSPREG00000005456	-	86	33.271	ENSPNAG00000016635	-	88	33.271	Pygocentrus_nattereri
ENSPREG00000005456	-	74	32.694	ENSPNAG00000017596	-	89	32.694	Pygocentrus_nattereri
ENSPREG00000005456	-	85	33.837	ENSPNAG00000021754	-	88	33.837	Pygocentrus_nattereri
ENSPREG00000005456	-	69	52.375	ENSXCOG00000008881	-	90	52.375	Xiphophorus_couchianus
ENSPREG00000005456	-	88	35.795	ENSXCOG00000013093	-	92	35.795	Xiphophorus_couchianus
ENSPREG00000005456	-	88	45.748	ENSXMAG00000028672	-	92	45.748	Xiphophorus_maculatus