EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005467 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4479 bases
Position: chrLG8:49520-53998
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000007980	RVT_1	PF00078.27	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008073	-	849	-	ENSPREP00000007980	282 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005467	-	54	49.438	ENSPREG00000012677	-	64	49.438
ENSPREG00000005467	-	78	34.211	ENSPREG00000005681	-	75	34.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005467	-	74	36.863	ENSACLG00000019432	-	56	36.863	Astatotilapia_calliptera
ENSPREG00000005467	-	79	33.460	ENSACLG00000025717	-	81	33.460	Astatotilapia_calliptera
ENSPREG00000005467	-	68	34.836	ENSACLG00000017900	-	94	34.836	Astatotilapia_calliptera
ENSPREG00000005467	-	79	34.444	ENSACLG00000005315	-	59	34.444	Astatotilapia_calliptera
ENSPREG00000005467	-	67	33.891	ENSACLG00000014736	-	96	33.891	Astatotilapia_calliptera
ENSPREG00000005467	-	83	35.816	ENSCVAG00000009961	-	55	35.816	Cyprinodon_variegatus
ENSPREG00000005467	-	82	31.655	ENSFHEG00000014931	-	53	31.655	Fundulus_heteroclitus
ENSPREG00000005467	-	78	31.461	ENSHBUG00000015481	-	67	31.461	Haplochromis_burtoni
ENSPREG00000005467	-	68	33.750	ENSHBUG00000003593	-	91	33.750	Haplochromis_burtoni
ENSPREG00000005467	-	62	31.053	ENSLBEG00000019663	-	80	31.053	Labrus_bergylta
ENSPREG00000005467	-	78	33.086	ENSLBEG00000015744	-	97	33.086	Labrus_bergylta
ENSPREG00000005467	-	80	32.714	ENSLBEG00000023571	-	79	32.714	Labrus_bergylta
ENSPREG00000005467	-	72	30.556	ENSLBEG00000022922	-	82	30.556	Labrus_bergylta
ENSPREG00000005467	-	73	33.466	ENSLBEG00000012683	-	64	33.466	Labrus_bergylta
ENSPREG00000005467	-	68	34.836	ENSMZEG00005015360	-	94	34.836	Maylandia_zebra
ENSPREG00000005467	-	84	32.639	ENSMZEG00005014401	-	80	32.639	Maylandia_zebra
ENSPREG00000005467	-	84	31.597	ENSMMOG00000014893	-	98	31.597	Mola_mola
ENSPREG00000005467	-	61	31.188	ENSONIG00000020621	-	61	31.188	Oreochromis_niloticus
ENSPREG00000005467	-	69	32.701	ENSORLG00015003246	-	90	32.701	Oryzias_latipes_hsok
ENSPREG00000005467	-	78	37.313	ENSPKIG00000013191	-	57	37.313	Paramormyrops_kingsleyae
ENSPREG00000005467	-	63	36.224	ENSPLAG00000014995	-	82	36.224	Poecilia_latipinna
ENSPREG00000005467	-	79	33.051	ENSPMEG00000016120	-	91	33.051	Poecilia_mexicana
ENSPREG00000005467	-	82	30.108	ENSPNYG00000005142	-	59	30.108	Pundamilia_nyererei
ENSPREG00000005467	-	62	32.444	ENSPNYG00000024140	-	92	32.444	Pundamilia_nyererei
ENSPREG00000005467	-	71	31.174	ENSXETG00000030237	-	95	31.174	Xenopus_tropicalis
ENSPREG00000005467	-	68	30.901	ENSXMAG00000026828	-	88	30.901	Xiphophorus_maculatus