EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005527 (Gene tree)
Gene ID: -
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3742 bases
Position: chrLG23:6972614-6976355
Accession: ZDB-GENE-070629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008083	LSM	PF01423.22	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008176	-	336	-	ENSPREP00000008083	111 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005527	lsm8	72	85.000	ENSG00000128534	LSM8	97	85.000	Homo_sapiens
ENSPREG00000005527	lsm8	72	87.500	ENSAPOG00000008649	lsm8	76	87.500	Acanthochromis_polyacanthus
ENSPREG00000005527	lsm8	72	85.000	ENSAMEG00000001162	LSM8	76	85.000	Ailuropoda_melanoleuca
ENSPREG00000005527	lsm8	72	87.500	ENSACIG00000014694	lsm8	97	87.500	Amphilophus_citrinellus
ENSPREG00000005527	lsm8	72	87.500	ENSAOCG00000013926	lsm8	76	87.500	Amphiprion_ocellaris
ENSPREG00000005527	lsm8	72	87.500	ENSAPEG00000023502	lsm8	76	87.500	Amphiprion_percula
ENSPREG00000005527	lsm8	72	87.500	ENSATEG00000023432	lsm8	97	87.500	Anabas_testudineus
ENSPREG00000005527	lsm8	72	86.250	ENSAPLG00000005115	LSM8	74	86.250	Anas_platyrhynchos
ENSPREG00000005527	lsm8	72	85.000	ENSANAG00000027771	LSM8	99	85.000	Aotus_nancymaae
ENSPREG00000005527	lsm8	72	87.500	ENSACLG00000011253	lsm8	76	87.500	Astatotilapia_calliptera
ENSPREG00000005527	lsm8	72	86.250	ENSAMXG00000042902	lsm8	76	86.250	Astyanax_mexicanus
ENSPREG00000005527	lsm8	72	85.000	ENSBTAG00000012649	LSM8	76	85.000	Bos_taurus
ENSPREG00000005527	lsm8	70	51.282	WBGene00003082	lsm-8	72	51.282	Caenorhabditis_elegans
ENSPREG00000005527	lsm8	72	85.000	ENSCJAG00000046406	LSM8	99	85.000	Callithrix_jacchus
ENSPREG00000005527	lsm8	70	85.897	ENSCAFG00000016459	LSM8	72	85.897	Canis_familiaris
ENSPREG00000005527	lsm8	72	85.000	ENSCAFG00020007643	-	76	85.000	Canis_lupus_dingo
ENSPREG00000005527	lsm8	72	85.000	ENSCHIG00000014201	LSM8	78	85.000	Capra_hircus
ENSPREG00000005527	lsm8	72	85.000	ENSTSYG00000032434	LSM8	76	85.000	Carlito_syrichta
ENSPREG00000005527	lsm8	72	85.000	ENSCAPG00000008253	LSM8	99	85.000	Cavia_aperea
ENSPREG00000005527	lsm8	72	85.000	ENSCPOG00000035673	LSM8	76	85.000	Cavia_porcellus
ENSPREG00000005527	lsm8	72	85.000	ENSCCAG00000021329	LSM8	99	85.000	Cebus_capucinus
ENSPREG00000005527	lsm8	72	85.000	ENSCATG00000045302	LSM8	99	85.000	Cercocebus_atys
ENSPREG00000005527	lsm8	72	85.000	ENSCLAG00000003726	LSM8	76	85.000	Chinchilla_lanigera
ENSPREG00000005527	lsm8	72	85.000	ENSCSAG00000010802	-	76	85.000	Chlorocebus_sabaeus
ENSPREG00000005527	lsm8	82	73.684	ENSCSAG00000019007	-	92	73.684	Chlorocebus_sabaeus
ENSPREG00000005527	lsm8	72	85.000	ENSCPBG00000008154	LSM8	74	85.000	Chrysemys_picta_bellii
ENSPREG00000005527	lsm8	72	67.500	ENSCING00000024877	-	76	67.500	Ciona_intestinalis
ENSPREG00000005527	lsm8	72	85.000	ENSCANG00000040728	LSM8	99	85.000	Colobus_angolensis_palliatus
ENSPREG00000005527	lsm8	72	85.000	ENSCGRG00001000450	Lsm8	76	85.000	Cricetulus_griseus_chok1gshd
ENSPREG00000005527	lsm8	72	85.000	ENSCGRG00000005587	Lsm8	86	85.000	Cricetulus_griseus_crigri
ENSPREG00000005527	lsm8	71	87.342	ENSCSEG00000004164	lsm8	79	87.342	Cynoglossus_semilaevis
ENSPREG00000005527	lsm8	72	88.750	ENSCVAG00000020547	lsm8	76	88.750	Cyprinodon_variegatus
ENSPREG00000005527	lsm8	72	85.000	ENSDARG00000091656	lsm8	76	85.000	Danio_rerio
ENSPREG00000005527	lsm8	72	85.000	ENSDNOG00000034613	LSM8	76	85.000	Dasypus_novemcinctus
ENSPREG00000005527	lsm8	72	85.000	ENSDORG00000027868	Lsm8	76	85.000	Dipodomys_ordii
ENSPREG00000005527	lsm8	72	67.500	FBgn0035271	CG2021	77	67.500	Drosophila_melanogaster
ENSPREG00000005527	lsm8	72	86.250	ENSETEG00000011594	LSM8	76	86.250	Echinops_telfairi
ENSPREG00000005527	lsm8	72	83.750	ENSEBUG00000012017	lsm8	99	83.750	Eptatretus_burgeri
ENSPREG00000005527	lsm8	74	84.146	ENSECAG00000024025	LSM8	74	84.146	Equus_caballus
ENSPREG00000005527	lsm8	72	83.750	ENSELUG00000010138	lsm8	76	83.750	Esox_lucius
ENSPREG00000005527	lsm8	64	61.972	ENSFCAG00000044794	-	63	61.972	Felis_catus
ENSPREG00000005527	lsm8	72	85.000	ENSFCAG00000036620	-	76	85.000	Felis_catus
ENSPREG00000005527	lsm8	72	86.250	ENSFALG00000010023	LSM8	76	86.250	Ficedula_albicollis
ENSPREG00000005527	lsm8	72	85.000	ENSFDAG00000019530	LSM8	76	85.000	Fukomys_damarensis
ENSPREG00000005527	lsm8	72	87.500	ENSFHEG00000013729	lsm8	76	87.500	Fundulus_heteroclitus
ENSPREG00000005527	lsm8	72	86.250	ENSGALG00000009110	LSM8	76	86.250	Gallus_gallus
ENSPREG00000005527	lsm8	72	88.750	ENSGAFG00000001135	lsm8	76	88.750	Gambusia_affinis
ENSPREG00000005527	lsm8	72	85.000	ENSGAGG00000017366	LSM8	76	85.000	Gopherus_agassizii
ENSPREG00000005527	lsm8	72	85.000	ENSGGOG00000041883	LSM8	76	85.000	Gorilla_gorilla
ENSPREG00000005527	lsm8	72	87.500	ENSHBUG00000003646	lsm8	76	87.500	Haplochromis_burtoni
ENSPREG00000005527	lsm8	71	81.013	ENSHGLG00000019782	-	75	81.013	Heterocephalus_glaber_female
ENSPREG00000005527	lsm8	72	80.000	ENSHGLG00100012166	-	76	80.000	Heterocephalus_glaber_male
ENSPREG00000005527	lsm8	70	83.333	ENSHGLG00100003934	-	71	83.333	Heterocephalus_glaber_male
ENSPREG00000005527	lsm8	72	87.500	ENSHCOG00000005037	lsm8	76	87.500	Hippocampus_comes
ENSPREG00000005527	lsm8	72	86.250	ENSIPUG00000019811	NAA38	76	86.250	Ictalurus_punctatus
ENSPREG00000005527	lsm8	72	72.500	ENSSTOG00000034801	-	68	72.500	Ictidomys_tridecemlineatus
ENSPREG00000005527	lsm8	75	82.353	ENSSTOG00000009039	LSM8	85	82.353	Ictidomys_tridecemlineatus
ENSPREG00000005527	lsm8	72	85.000	ENSJJAG00000009031	Lsm8	75	85.000	Jaculus_jaculus
ENSPREG00000005527	lsm8	72	87.500	ENSKMAG00000018983	lsm8	76	87.500	Kryptolebias_marmoratus
ENSPREG00000005527	lsm8	72	86.250	ENSLACG00000010231	LSM8	76	86.250	Latimeria_chalumnae
ENSPREG00000005527	lsm8	72	87.500	ENSLOCG00000015580	lsm8	76	87.500	Lepisosteus_oculatus
ENSPREG00000005527	lsm8	72	85.000	ENSLAFG00000011242	LSM8	75	85.000	Loxodonta_africana
ENSPREG00000005527	lsm8	72	82.500	ENSMFAG00000013044	-	76	82.500	Macaca_fascicularis
ENSPREG00000005527	lsm8	72	85.000	ENSMFAG00000035798	LSM8	99	85.000	Macaca_fascicularis
ENSPREG00000005527	lsm8	72	85.000	ENSMMUG00000046401	LSM8	99	85.000	Macaca_mulatta
ENSPREG00000005527	lsm8	72	82.500	ENSMNEG00000011141	-	97	82.500	Macaca_nemestrina
ENSPREG00000005527	lsm8	72	85.000	ENSMNEG00000036764	-	99	85.000	Macaca_nemestrina
ENSPREG00000005527	lsm8	72	85.000	ENSMLEG00000035828	-	99	85.000	Mandrillus_leucophaeus
ENSPREG00000005527	lsm8	72	72.500	ENSMLEG00000039324	-	74	72.500	Mandrillus_leucophaeus
ENSPREG00000005527	lsm8	72	87.500	ENSMAMG00000018839	lsm8	97	87.500	Mastacembelus_armatus
ENSPREG00000005527	lsm8	72	87.500	ENSMZEG00005019138	lsm8	76	87.500	Maylandia_zebra
ENSPREG00000005527	lsm8	72	86.250	ENSMGAG00000008808	LSM8	76	86.250	Meleagris_gallopavo
ENSPREG00000005527	lsm8	72	80.000	ENSMAUG00000020287	-	99	80.000	Mesocricetus_auratus
ENSPREG00000005527	lsm8	72	66.250	ENSMAUG00000015356	-	73	66.250	Mesocricetus_auratus
ENSPREG00000005527	lsm8	72	77.500	ENSMAUG00000015721	-	76	77.500	Mesocricetus_auratus
ENSPREG00000005527	lsm8	72	85.000	ENSMICG00000042730	LSM8	76	85.000	Microcebus_murinus
ENSPREG00000005527	lsm8	72	85.000	ENSMOCG00000001688	Lsm8	76	85.000	Microtus_ochrogaster
ENSPREG00000005527	lsm8	72	87.500	ENSMMOG00000006046	lsm8	97	87.500	Mola_mola
ENSPREG00000005527	lsm8	61	83.824	ENSMODG00000015729	LSM8	78	83.824	Monodelphis_domestica
ENSPREG00000005527	lsm8	72	87.500	ENSMALG00000000405	lsm8	76	87.500	Monopterus_albus
ENSPREG00000005527	lsm8	90	75.000	MGP_CAROLIEiJ_G0028125	-	90	75.000	Mus_caroli
ENSPREG00000005527	lsm8	90	74.000	ENSMUSG00000044155	Lsm8	90	74.000	Mus_musculus
ENSPREG00000005527	lsm8	72	85.000	MGP_PahariEiJ_G0021881	Lsm8	97	85.000	Mus_pahari
ENSPREG00000005527	lsm8	90	75.000	MGP_SPRETEiJ_G0029125	-	90	75.000	Mus_spretus
ENSPREG00000005527	lsm8	72	85.000	ENSMLUG00000006837	-	76	85.000	Myotis_lucifugus
ENSPREG00000005527	lsm8	72	83.750	ENSMLUG00000027762	-	76	83.750	Myotis_lucifugus
ENSPREG00000005527	lsm8	72	85.000	ENSNGAG00000016554	Lsm8	76	85.000	Nannospalax_galili
ENSPREG00000005527	lsm8	72	87.500	ENSNBRG00000014441	lsm8	76	87.500	Neolamprologus_brichardi
ENSPREG00000005527	lsm8	72	85.000	ENSNLEG00000011768	LSM8	76	85.000	Nomascus_leucogenys
ENSPREG00000005527	lsm8	69	75.325	ENSMEUG00000007801	LSM8	73	75.325	Notamacropus_eugenii
ENSPREG00000005527	lsm8	72	85.000	ENSOPRG00000014809	LSM8	86	85.000	Ochotona_princeps
ENSPREG00000005527	lsm8	72	85.000	ENSODEG00000000418	-	76	85.000	Octodon_degus
ENSPREG00000005527	lsm8	63	70.000	ENSODEG00000020290	-	73	70.000	Octodon_degus
ENSPREG00000005527	lsm8	72	85.000	ENSOANG00000014536	LSM8	76	85.000	Ornithorhynchus_anatinus
ENSPREG00000005527	lsm8	72	85.000	ENSOCUG00000017359	LSM8	75	85.000	Oryctolagus_cuniculus
ENSPREG00000005527	lsm8	71	88.608	ENSORLG00000017432	lsm8	77	88.608	Oryzias_latipes
ENSPREG00000005527	lsm8	71	88.608	ENSORLG00020004376	lsm8	77	88.608	Oryzias_latipes_hni
ENSPREG00000005527	lsm8	95	72.381	ENSORLG00015003757	lsm8	100	72.381	Oryzias_latipes_hsok
ENSPREG00000005527	lsm8	72	88.750	ENSOMEG00000022509	lsm8	81	88.750	Oryzias_melastigma
ENSPREG00000005527	lsm8	72	85.000	ENSOGAG00000013377	LSM8	76	85.000	Otolemur_garnettii
ENSPREG00000005527	lsm8	72	85.000	ENSOARG00000017974	LSM8	76	85.000	Ovis_aries
ENSPREG00000005527	lsm8	72	85.000	ENSPPAG00000043228	-	97	85.000	Pan_paniscus
ENSPREG00000005527	lsm8	72	85.000	ENSPPRG00000006444	LSM8	76	85.000	Panthera_pardus
ENSPREG00000005527	lsm8	72	85.000	ENSPTIG00000004722	LSM8	76	85.000	Panthera_tigris_altaica
ENSPREG00000005527	lsm8	72	85.000	ENSPTRG00000046596	-	97	85.000	Pan_troglodytes
ENSPREG00000005527	lsm8	72	81.250	ENSPANG00000019395	-	76	81.250	Papio_anubis
ENSPREG00000005527	lsm8	72	85.000	ENSPANG00000035470	-	99	85.000	Papio_anubis
ENSPREG00000005527	lsm8	78	74.257	ENSPKIG00000006092	lsm8	95	74.257	Paramormyrops_kingsleyae
ENSPREG00000005527	lsm8	72	85.000	ENSPSIG00000017054	LSM8	97	85.000	Pelodiscus_sinensis
ENSPREG00000005527	lsm8	72	87.500	ENSPMGG00000016442	lsm8	97	87.500	Periophthalmus_magnuspinnatus
ENSPREG00000005527	lsm8	72	85.000	ENSPEMG00000009153	Lsm8	99	85.000	Peromyscus_maniculatus_bairdii
ENSPREG00000005527	lsm8	69	85.714	ENSPCIG00000021467	LSM8	74	85.714	Phascolarctos_cinereus
ENSPREG00000005527	lsm8	72	88.750	ENSPFOG00000012340	lsm8	76	88.750	Poecilia_formosa
ENSPREG00000005527	lsm8	72	88.750	ENSPLAG00000000516	lsm8	76	88.750	Poecilia_latipinna
ENSPREG00000005527	lsm8	72	88.750	ENSPMEG00000022567	lsm8	76	88.750	Poecilia_mexicana
ENSPREG00000005527	lsm8	72	85.000	ENSPPYG00000017942	LSM8	76	85.000	Pongo_abelii
ENSPREG00000005527	lsm8	69	64.935	ENSPCOG00000017982	-	70	64.935	Propithecus_coquereli
ENSPREG00000005527	lsm8	72	85.000	ENSPCOG00000003309	-	76	85.000	Propithecus_coquereli
ENSPREG00000005527	lsm8	72	83.750	ENSPVAG00000000990	LSM8	86	83.750	Pteropus_vampyrus
ENSPREG00000005527	lsm8	72	87.500	ENSPNYG00000011448	lsm8	76	87.500	Pundamilia_nyererei
ENSPREG00000005527	lsm8	72	86.250	ENSPNAG00000010252	lsm8	76	86.250	Pygocentrus_nattereri
ENSPREG00000005527	lsm8	72	85.000	ENSRNOG00000058677	Lsm8	76	85.000	Rattus_norvegicus
ENSPREG00000005527	lsm8	72	85.000	ENSRBIG00000032851	LSM8	99	85.000	Rhinopithecus_bieti
ENSPREG00000005527	lsm8	72	85.000	ENSRROG00000039618	LSM8	99	85.000	Rhinopithecus_roxellana
ENSPREG00000005527	lsm8	72	85.000	ENSSBOG00000023223	LSM8	99	85.000	Saimiri_boliviensis_boliviensis
ENSPREG00000005527	lsm8	72	85.000	ENSSHAG00000018435	-	76	85.000	Sarcophilus_harrisii
ENSPREG00000005527	lsm8	72	86.250	ENSSFOG00015004412	lsm8	76	86.250	Scleropages_formosus
ENSPREG00000005527	lsm8	72	85.000	ENSSMAG00000009458	lsm8	97	85.000	Scophthalmus_maximus
ENSPREG00000005527	lsm8	72	87.500	ENSSDUG00000014702	lsm8	76	87.500	Seriola_dumerili
ENSPREG00000005527	lsm8	72	87.500	ENSSLDG00000016870	lsm8	97	87.500	Seriola_lalandi_dorsalis
ENSPREG00000005527	lsm8	71	86.076	ENSSARG00000009628	-	100	86.076	Sorex_araneus
ENSPREG00000005527	lsm8	72	85.000	ENSSPUG00000017419	LSM8	76	85.000	Sphenodon_punctatus
ENSPREG00000005527	lsm8	72	87.500	ENSSPAG00000021422	lsm8	76	87.500	Stegastes_partitus
ENSPREG00000005527	lsm8	72	85.000	ENSSSCG00000021652	LSM8	76	85.000	Sus_scrofa
ENSPREG00000005527	lsm8	72	85.000	ENSTGUG00000016823	-	76	85.000	Taeniopygia_guttata
ENSPREG00000005527	lsm8	72	86.250	ENSTGUG00000004730	-	76	86.250	Taeniopygia_guttata
ENSPREG00000005527	lsm8	72	87.500	ENSTRUG00000025192	lsm8	76	87.500	Takifugu_rubripes
ENSPREG00000005527	lsm8	72	87.500	ENSTNIG00000002864	lsm8	76	87.500	Tetraodon_nigroviridis
ENSPREG00000005527	lsm8	72	85.000	ENSTTRG00000001023	LSM8	76	85.000	Tursiops_truncatus
ENSPREG00000005527	lsm8	72	85.000	ENSUAMG00000006943	-	76	85.000	Ursus_americanus
ENSPREG00000005527	lsm8	72	85.000	ENSUMAG00000003073	LSM8	78	85.000	Ursus_maritimus
ENSPREG00000005527	lsm8	72	85.000	ENSVPAG00000001530	LSM8	76	85.000	Vicugna_pacos
ENSPREG00000005527	lsm8	72	82.500	ENSVVUG00000013248	-	80	82.500	Vulpes_vulpes
ENSPREG00000005527	lsm8	72	85.000	ENSXETG00000021829	lsm8	75	85.000	Xenopus_tropicalis
ENSPREG00000005527	lsm8	72	88.750	ENSXCOG00000012938	lsm8	77	88.750	Xiphophorus_couchianus
ENSPREG00000005527	lsm8	72	88.750	ENSXMAG00000025919	lsm8	76	88.750	Xiphophorus_maculatus