EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 26122 bases
Position: chrLG16:19602055-19628176
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008099	zf-C2H2	PF00096.26	2.4e-38	1	6
ENSPREP00000008099	zf-C2H2	PF00096.26	2.4e-38	2	6
ENSPREP00000008099	zf-C2H2	PF00096.26	2.4e-38	3	6
ENSPREP00000008099	zf-C2H2	PF00096.26	2.4e-38	4	6
ENSPREP00000008099	zf-C2H2	PF00096.26	2.4e-38	5	6
ENSPREP00000008099	zf-C2H2	PF00096.26	2.4e-38	6	6
ENSPREP00000008099	zf-met	PF12874.7	5.6e-07	1	1
ENSPREP00000008099	zf-C2H2_jaz	PF12171.8	9.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008192	-	1227	-	ENSPREP00000008099	408 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005538	-	78	42.949	ENSPREG00000004571	-	91	42.949
ENSPREG00000005538	-	72	31.987	ENSPREG00000016858	ZNF319	93	31.987
ENSPREG00000005538	-	65	45.098	ENSPREG00000019806	-	55	45.098
ENSPREG00000005538	-	69	39.091	ENSPREG00000017892	-	57	39.091
ENSPREG00000005538	-	92	35.907	ENSPREG00000016144	-	90	35.907
ENSPREG00000005538	-	76	40.523	ENSPREG00000013112	-	91	40.523
ENSPREG00000005538	-	76	36.567	ENSPREG00000014348	-	55	36.567
ENSPREG00000005538	-	74	37.500	ENSPREG00000014340	-	72	34.457
ENSPREG00000005538	-	81	36.486	ENSPREG00000011439	-	95	40.517
ENSPREG00000005538	-	78	39.037	ENSPREG00000021537	-	82	36.519
ENSPREG00000005538	-	87	32.083	ENSPREG00000007146	-	61	34.241
ENSPREG00000005538	-	71	40.000	ENSPREG00000004745	-	84	40.000
ENSPREG00000005538	-	80	38.608	ENSPREG00000015689	-	62	38.323
ENSPREG00000005538	-	78	39.326	ENSPREG00000002582	-	60	39.326
ENSPREG00000005538	-	75	33.206	ENSPREG00000009121	-	72	33.206
ENSPREG00000005538	-	76	40.000	ENSPREG00000015254	-	63	34.967
ENSPREG00000005538	-	76	34.286	ENSPREG00000016116	-	93	34.286
ENSPREG00000005538	-	92	40.708	ENSPREG00000003614	-	99	41.111
ENSPREG00000005538	-	80	32.601	ENSPREG00000000364	-	80	32.601
ENSPREG00000005538	-	73	40.385	ENSPREG00000020857	-	58	39.130
ENSPREG00000005538	-	71	40.909	ENSPREG00000001713	-	92	40.909
ENSPREG00000005538	-	73	37.824	ENSPREG00000000449	-	68	37.824
ENSPREG00000005538	-	78	46.108	ENSPREG00000004036	-	95	46.108
ENSPREG00000005538	-	80	35.526	ENSPREG00000014127	-	73	33.103
ENSPREG00000005538	-	82	34.155	ENSPREG00000018366	prdm5	69	34.155
ENSPREG00000005538	-	77	35.759	ENSPREG00000010437	-	80	35.759
ENSPREG00000005538	-	82	40.000	ENSPREG00000013727	-	86	38.323
ENSPREG00000005538	-	94	41.176	ENSPREG00000012132	-	100	41.176
ENSPREG00000005538	-	76	46.667	ENSPREG00000006360	-	50	46.667
ENSPREG00000005538	-	71	43.373	ENSPREG00000009372	-	96	43.373
ENSPREG00000005538	-	81	47.143	ENSPREG00000001743	-	81	47.143
ENSPREG00000005538	-	81	41.765	ENSPREG00000015017	-	98	38.614
ENSPREG00000005538	-	91	35.106	ENSPREG00000000153	-	90	35.106
ENSPREG00000005538	-	82	33.846	ENSPREG00000013699	-	68	33.846
ENSPREG00000005538	-	89	39.860	ENSPREG00000004725	-	75	39.860
ENSPREG00000005538	-	77	41.566	ENSPREG00000004728	-	78	41.566
ENSPREG00000005538	-	92	32.454	ENSPREG00000000733	-	93	32.454
ENSPREG00000005538	-	93	30.000	ENSPREG00000015226	-	99	30.000
ENSPREG00000005538	-	75	37.061	ENSPREG00000002642	-	95	38.019
ENSPREG00000005538	-	77	35.714	ENSPREG00000016129	-	89	35.714
ENSPREG00000005538	-	77	38.922	ENSPREG00000016220	-	70	38.922
ENSPREG00000005538	-	74	40.000	ENSPREG00000016249	-	74	40.000
ENSPREG00000005538	-	85	36.972	ENSPREG00000002181	-	99	41.204
ENSPREG00000005538	-	79	43.293	ENSPREG00000004006	-	62	43.293
ENSPREG00000005538	-	75	34.551	ENSPREG00000006537	-	93	34.551
ENSPREG00000005538	-	78	39.157	ENSPREG00000001952	-	96	39.157
ENSPREG00000005538	-	84	40.278	ENSPREG00000014800	-	95	37.884
ENSPREG00000005538	-	80	34.615	ENSPREG00000013719	-	73	34.615
ENSPREG00000005538	-	80	39.752	ENSPREG00000002696	-	90	39.752
ENSPREG00000005538	-	81	39.823	ENSPREG00000014851	-	84	39.823
ENSPREG00000005538	-	80	33.939	ENSPREG00000016270	-	76	34.831
ENSPREG00000005538	-	78	39.640	ENSPREG00000017631	znf668	84	39.640
ENSPREG00000005538	-	89	38.542	ENSPREG00000013476	-	99	43.860
ENSPREG00000005538	-	73	38.235	ENSPREG00000021718	gfi1b	60	38.235
ENSPREG00000005538	-	78	38.579	ENSPREG00000000467	-	57	38.579
ENSPREG00000005538	-	75	34.783	ENSPREG00000014373	-	84	34.783
ENSPREG00000005538	-	71	40.000	ENSPREG00000015421	-	72	40.000
ENSPREG00000005538	-	70	47.059	ENSPREG00000007997	GFI1	53	40.517
ENSPREG00000005538	-	76	37.086	ENSPREG00000019972	-	99	37.086
ENSPREG00000005538	-	80	32.653	ENSPREG00000007135	-	67	32.082
ENSPREG00000005538	-	72	40.964	ENSPREG00000015132	-	73	38.060
ENSPREG00000005538	-	77	32.990	ENSPREG00000016308	-	67	32.530
ENSPREG00000005538	-	71	36.301	ENSPREG00000003393	-	75	37.201
ENSPREG00000005538	-	71	40.000	ENSPREG00000009495	-	73	40.000
ENSPREG00000005538	-	82	36.519	ENSPREG00000003217	-	83	37.201
ENSPREG00000005538	-	76	35.176	ENSPREG00000003213	-	70	35.176
ENSPREG00000005538	-	85	35.959	ENSPREG00000015247	-	84	35.959
ENSPREG00000005538	-	72	53.571	ENSPREG00000011741	-	87	53.571
ENSPREG00000005538	-	80	39.655	ENSPREG00000002664	-	91	39.655
ENSPREG00000005538	-	87	37.024	ENSPREG00000004672	-	85	45.029
ENSPREG00000005538	-	75	38.793	ENSPREG00000016593	-	65	38.793
ENSPREG00000005538	-	74	45.902	ENSPREG00000008826	-	90	43.529
ENSPREG00000005538	-	76	37.349	ENSPREG00000003555	-	95	41.463
ENSPREG00000005538	-	77	35.060	ENSPREG00000016186	-	65	35.060
ENSPREG00000005538	-	71	36.129	ENSPREG00000010261	zbtb17	63	36.129
ENSPREG00000005538	-	84	36.519	ENSPREG00000015081	-	89	36.519
ENSPREG00000005538	-	79	42.169	ENSPREG00000020014	-	94	42.169
ENSPREG00000005538	-	85	37.209	ENSPREG00000013154	-	87	37.209
ENSPREG00000005538	-	74	34.014	ENSPREG00000008907	-	50	34.014
ENSPREG00000005538	-	76	47.273	ENSPREG00000002548	-	96	35.338
ENSPREG00000005538	-	72	38.272	ENSPREG00000013689	-	96	39.264
ENSPREG00000005538	-	69	32.384	ENSPREG00000013965	-	95	32.384
ENSPREG00000005538	-	72	41.317	ENSPREG00000002637	-	67	41.317
ENSPREG00000005538	-	71	43.038	ENSPREG00000004306	-	94	43.038
ENSPREG00000005538	-	80	42.169	ENSPREG00000003650	-	62	42.169
ENSPREG00000005538	-	74	38.333	ENSPREG00000014945	-	99	38.333
ENSPREG00000005538	-	84	33.209	ENSPREG00000021246	-	90	33.209
ENSPREG00000005538	-	74	41.379	ENSPREG00000019990	-	96	41.379
ENSPREG00000005538	-	72	35.211	ENSPREG00000013107	-	62	35.211
ENSPREG00000005538	-	80	39.091	ENSPREG00000003523	-	59	39.091
ENSPREG00000005538	-	80	39.423	ENSPREG00000005144	-	99	35.484
ENSPREG00000005538	-	81	38.947	ENSPREG00000002681	-	79	38.947
ENSPREG00000005538	-	82	43.529	ENSPREG00000003483	-	93	43.529
ENSPREG00000005538	-	82	43.114	ENSPREG00000003894	-	97	43.114
ENSPREG00000005538	-	61	45.570	ENSPREG00000002603	-	62	45.570
ENSPREG00000005538	-	76	37.566	ENSPREG00000007875	znf384l	50	37.566
ENSPREG00000005538	-	71	36.548	ENSPREG00000001823	-	80	35.985
ENSPREG00000005538	-	78	34.973	ENSPREG00000019161	-	84	48.837
ENSPREG00000005538	-	70	43.529	ENSPREG00000021924	-	73	43.529
ENSPREG00000005538	-	90	33.831	ENSPREG00000014477	-	99	35.395
ENSPREG00000005538	-	72	40.196	ENSPREG00000001514	zgc:113343	70	34.915
ENSPREG00000005538	-	72	30.466	ENSPREG00000016204	-	60	30.466
ENSPREG00000005538	-	69	35.503	ENSPREG00000000451	-	80	35.503
ENSPREG00000005538	-	88	32.153	ENSPREG00000014360	-	73	32.153
ENSPREG00000005538	-	78	36.271	ENSPREG00000015342	-	69	36.271
ENSPREG00000005538	-	74	35.196	ENSPREG00000014898	-	66	33.668
ENSPREG00000005538	-	82	32.743	ENSPREG00000001386	-	99	33.333
ENSPREG00000005538	-	71	36.000	ENSPREG00000001388	znf341	53	36.000
ENSPREG00000005538	-	74	46.000	ENSPREG00000005015	-	95	40.719
ENSPREG00000005538	-	73	39.286	ENSPREG00000000853	-	63	39.286
ENSPREG00000005538	-	70	39.806	ENSPREG00000009488	-	93	39.806
ENSPREG00000005538	-	78	34.155	ENSPREG00000012539	-	76	34.155
ENSPREG00000005538	-	71	36.111	ENSPREG00000003193	-	99	35.739
ENSPREG00000005538	-	69	38.281	ENSPREG00000018985	scrt1b	50	38.281
ENSPREG00000005538	-	99	38.750	ENSPREG00000014366	-	99	34.114
ENSPREG00000005538	-	72	41.791	ENSPREG00000001774	-	82	41.791
ENSPREG00000005538	-	75	45.614	ENSPREG00000014330	-	58	45.614
ENSPREG00000005538	-	92	34.194	ENSPREG00000013780	-	96	35.811
ENSPREG00000005538	-	81	40.217	ENSPREG00000004839	-	97	34.615
ENSPREG00000005538	-	70	39.024	ENSPREG00000014105	-	91	38.971
ENSPREG00000005538	-	72	45.865	ENSPREG00000002715	-	80	44.578
ENSPREG00000005538	-	84	42.373	ENSPREG00000001441	-	97	42.373
ENSPREG00000005538	-	80	35.640	ENSPREG00000015286	-	86	43.182
ENSPREG00000005538	-	74	40.964	ENSPREG00000014028	-	96	40.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005538	-	75	35.862	ENSACIG00000008886	znf1164	88	35.862	Amphilophus_citrinellus
ENSPREG00000005538	-	72	43.709	ENSACIG00000007882	-	85	43.709	Amphilophus_citrinellus
ENSPREG00000005538	-	80	36.496	ENSACIG00000000360	si:ch211-241b2.1	92	36.496	Amphilophus_citrinellus
ENSPREG00000005538	-	75	42.169	ENSATEG00000008683	si:ch211-241b2.1	77	42.169	Anabas_testudineus
ENSPREG00000005538	-	74	35.366	ENSATEG00000008667	-	83	35.366	Anabas_testudineus
ENSPREG00000005538	-	71	34.597	ENSACLG00000024670	-	81	40.828	Astatotilapia_calliptera
ENSPREG00000005538	-	75	38.462	ENSACLG00000000521	-	95	38.462	Astatotilapia_calliptera
ENSPREG00000005538	-	72	33.133	ENSACLG00000017449	-	61	33.133	Astatotilapia_calliptera
ENSPREG00000005538	-	74	43.609	ENSAMXG00000041650	-	95	43.609	Astyanax_mexicanus
ENSPREG00000005538	-	75	35.772	ENSAMXG00000043291	-	67	35.772	Astyanax_mexicanus
ENSPREG00000005538	-	78	43.976	ENSAMXG00000029660	-	54	43.976	Astyanax_mexicanus
ENSPREG00000005538	-	73	45.679	ENSCSEG00000015585	-	70	45.679	Cynoglossus_semilaevis
ENSPREG00000005538	-	85	32.000	ENSDARG00000116765	zgc:162962	96	32.000	Danio_rerio
ENSPREG00000005538	-	71	41.264	ENSDARG00000103777	znf1001	99	41.264	Danio_rerio
ENSPREG00000005538	-	72	39.344	ENSDARG00000105056	znf45l	94	37.500	Danio_rerio
ENSPREG00000005538	-	77	46.957	ENSDARG00000099890	CU207221.2	95	41.667	Danio_rerio
ENSPREG00000005538	-	73	42.941	ENSDARG00000097521	si:dkey-111k8.5	87	42.941	Danio_rerio
ENSPREG00000005538	-	81	43.796	ENSDARG00000053165	zgc:113377	93	36.090	Danio_rerio
ENSPREG00000005538	-	74	39.373	ENSDARG00000094736	znf1157	79	56.364	Danio_rerio
ENSPREG00000005538	-	75	37.671	ENSDARG00000102401	znf1001	99	37.671	Danio_rerio
ENSPREG00000005538	-	73	38.889	ENSDARG00000113011	zgc:113102	94	38.889	Danio_rerio
ENSPREG00000005538	-	80	34.091	ENSDARG00000098923	zgc:173577	96	34.091	Danio_rerio
ENSPREG00000005538	-	72	35.354	ENSDARG00000099172	BX000701.1	92	34.328	Danio_rerio
ENSPREG00000005538	-	76	40.000	ENSDARG00000099618	si:dkey-1b17.6	99	40.000	Danio_rerio
ENSPREG00000005538	-	76	38.225	ENSDARG00000099731	CABZ01066719.1	89	38.225	Danio_rerio
ENSPREG00000005538	-	73	39.267	ENSDARG00000071833	znf1162	89	37.963	Danio_rerio
ENSPREG00000005538	-	82	44.706	ENSDARG00000088507	znf982	98	44.311	Danio_rerio
ENSPREG00000005538	-	80	34.663	ENSDARG00000078159	zgc:175284	91	43.038	Danio_rerio
ENSPREG00000005538	-	71	37.654	ENSEBUG00000015073	-	80	34.432	Eptatretus_burgeri
ENSPREG00000005538	-	71	37.631	ENSFHEG00000018009	-	51	35.714	Fundulus_heteroclitus
ENSPREG00000005538	-	71	40.462	ENSFHEG00000018209	-	67	40.462	Fundulus_heteroclitus
ENSPREG00000005538	-	78	38.922	ENSFHEG00000013152	-	59	38.922	Fundulus_heteroclitus
ENSPREG00000005538	-	77	36.269	ENSHBUG00000009953	-	62	31.761	Haplochromis_burtoni
ENSPREG00000005538	-	74	43.713	ENSHBUG00000018916	-	64	43.713	Haplochromis_burtoni
ENSPREG00000005538	-	73	41.121	ENSKMAG00000009563	-	76	41.121	Kryptolebias_marmoratus
ENSPREG00000005538	-	76	41.317	ENSLBEG00000028628	znf1174	57	41.317	Labrus_bergylta
ENSPREG00000005538	-	73	48.980	ENSLBEG00000022939	-	50	48.980	Labrus_bergylta
ENSPREG00000005538	-	83	37.838	ENSMAMG00000014743	-	56	37.838	Mastacembelus_armatus
ENSPREG00000005538	-	73	37.824	ENSMZEG00005025729	-	91	38.554	Maylandia_zebra
ENSPREG00000005538	-	79	35.000	ENSMZEG00005022161	-	94	31.690	Maylandia_zebra
ENSPREG00000005538	-	71	42.683	ENSMZEG00005026470	-	58	42.683	Maylandia_zebra
ENSPREG00000005538	-	78	37.427	ENSMZEG00005025568	-	79	37.427	Maylandia_zebra
ENSPREG00000005538	-	76	41.830	ENSMZEG00005021426	-	83	41.830	Maylandia_zebra
ENSPREG00000005538	-	71	35.836	ENSMZEG00005027793	-	71	35.836	Maylandia_zebra
ENSPREG00000005538	-	74	44.311	ENSMZEG00005007426	-	67	44.311	Maylandia_zebra
ENSPREG00000005538	-	93	41.954	ENSMZEG00005027943	-	100	40.000	Maylandia_zebra
ENSPREG00000005538	-	77	37.107	ENSMZEG00005005162	-	74	37.107	Maylandia_zebra
ENSPREG00000005538	-	71	36.145	ENSMALG00000008638	-	58	36.145	Monopterus_albus
ENSPREG00000005538	-	71	38.258	ENSMALG00000018074	-	61	38.258	Monopterus_albus
ENSPREG00000005538	-	80	37.975	ENSNBRG00000000577	-	84	35.736	Neolamprologus_brichardi
ENSPREG00000005538	-	81	37.888	ENSONIG00000013908	-	100	37.888	Oreochromis_niloticus
ENSPREG00000005538	-	73	31.618	ENSONIG00000006585	-	96	33.577	Oreochromis_niloticus
ENSPREG00000005538	-	83	39.333	ENSONIG00000003363	-	99	39.333	Oreochromis_niloticus
ENSPREG00000005538	-	80	43.243	ENSORLG00020019341	-	72	58.824	Oryzias_latipes_hni
ENSPREG00000005538	-	79	38.372	ENSPKIG00000020324	-	69	38.372	Paramormyrops_kingsleyae
ENSPREG00000005538	-	71	33.043	ENSPMGG00000001558	znf1174	72	33.043	Periophthalmus_magnuspinnatus
ENSPREG00000005538	-	86	38.690	ENSPFOG00000011766	-	97	38.690	Poecilia_formosa
ENSPREG00000005538	-	90	43.284	ENSPFOG00000001144	-	100	34.634	Poecilia_formosa
ENSPREG00000005538	-	75	42.466	ENSPLAG00000016561	zgc:113348	93	40.936	Poecilia_latipinna
ENSPREG00000005538	-	92	34.146	ENSPMEG00000007573	zgc:113343	63	39.216	Poecilia_mexicana
ENSPREG00000005538	-	89	30.189	ENSPNYG00000024183	zgc:173577	97	30.189	Pundamilia_nyererei
ENSPREG00000005538	-	61	52.564	ENSSDUG00000008682	-	68	52.564	Seriola_dumerili
ENSPREG00000005538	-	72	37.069	ENSSPAG00000013109	si:ch211-241b2.1	79	37.069	Stegastes_partitus
ENSPREG00000005538	-	75	33.459	ENSSPAG00000006539	-	93	33.459	Stegastes_partitus
ENSPREG00000005538	-	77	42.105	ENSSPAG00000009426	-	80	42.105	Stegastes_partitus
ENSPREG00000005538	-	72	43.787	ENSTNIG00000000277	-	94	43.787	Tetraodon_nigroviridis
ENSPREG00000005538	-	92	40.196	ENSXCOG00000017871	zgc:113343	66	40.196	Xiphophorus_couchianus
ENSPREG00000005538	-	77	40.196	ENSXMAG00000019923	zgc:113343	64	40.196	Xiphophorus_maculatus