EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005668 (Gene tree)
Gene ID: 103475376
Gene Symbol: larsb
Alias: -
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 24701 bases
Position: chrLG14:2497447-2522147
Accession: 103475376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008467	tRNA-synt_1g	PF09334.11	1.5e-15	1	2
ENSPREP00000008467	tRNA-synt_1g	PF09334.11	1.5e-15	2	2
ENSPREP00000008428	tRNA-synt_1g	PF09334.11	1.7e-15	1	2
ENSPREP00000008428	tRNA-synt_1g	PF09334.11	1.7e-15	2	2
ENSPREP00000008428	Anticodon_1	PF08264.13	8.4e-15	1	1
ENSPREP00000008467	Anticodon_1	PF08264.13	3.2e-10	1	1
ENSPREP00000008467	tRNA-synt_1	PF00133.22	3.9e-38	1	2
ENSPREP00000008467	tRNA-synt_1	PF00133.22	3.9e-38	2	2
ENSPREP00000008428	tRNA-synt_1	PF00133.22	4.6e-38	1	2
ENSPREP00000008428	tRNA-synt_1	PF00133.22	4.6e-38	2	2
ENSPREP00000008467	tRNA-synt_1e	PF01406.19	8.6e-07	1	1
ENSPREP00000008428	tRNA-synt_1e	PF01406.19	9.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008526	-	6576	XM_008426947	ENSPREP00000008428	1184 (aa)	XP_008425169	UPI0004A4E259
ENSPRET00000008565	-	5896	-	ENSPREP00000008467	1137 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005668's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005668	larsb	100	78.125	ENSG00000133706	LARS	100	78.919	Homo_sapiens
ENSPREG00000005668	larsb	100	93.170	ENSAPOG00000010585	larsb	100	93.304	Acanthochromis_polyacanthus
ENSPREG00000005668	larsb	99	77.872	ENSAMEG00000017584	LARS	100	77.872	Ailuropoda_melanoleuca
ENSPREG00000005668	larsb	99	90.886	ENSACIG00000014026	larsb	99	90.886	Amphilophus_citrinellus
ENSPREG00000005668	larsb	100	93.159	ENSAOCG00000016931	larsb	100	93.159	Amphiprion_ocellaris
ENSPREG00000005668	larsb	100	93.243	ENSAPEG00000017720	larsb	100	93.243	Amphiprion_percula
ENSPREG00000005668	larsb	100	87.858	ENSATEG00000010441	larsb	99	87.679	Anabas_testudineus
ENSPREG00000005668	larsb	96	78.390	ENSAPLG00000008145	LARS	100	78.565	Anas_platyrhynchos
ENSPREG00000005668	larsb	99	77.430	ENSACAG00000013916	LARS	99	77.430	Anolis_carolinensis
ENSPREG00000005668	larsb	100	69.932	ENSANAG00000014375	LARS	100	69.932	Aotus_nancymaae
ENSPREG00000005668	larsb	100	93.243	ENSACLG00000010881	larsb	100	93.243	Astatotilapia_calliptera
ENSPREG00000005668	larsb	100	87.257	ENSAMXG00000019979	larsb	100	87.089	Astyanax_mexicanus
ENSPREG00000005668	larsb	100	77.618	ENSBTAG00000006765	LARS	100	77.618	Bos_taurus
ENSPREG00000005668	larsb	99	55.621	WBGene00003073	lars-1	99	55.621	Caenorhabditis_elegans
ENSPREG00000005668	larsb	100	78.125	ENSCJAG00000021314	LARS	100	78.831	Callithrix_jacchus
ENSPREG00000005668	larsb	100	78.378	ENSCAFG00000006431	LARS	100	78.378	Canis_familiaris
ENSPREG00000005668	larsb	99	78.426	ENSCAFG00020025009	LARS	99	78.426	Canis_lupus_dingo
ENSPREG00000005668	larsb	100	77.618	ENSCHIG00000014949	LARS	100	77.618	Capra_hircus
ENSPREG00000005668	larsb	100	77.787	ENSTSYG00000001253	LARS	100	77.787	Carlito_syrichta
ENSPREG00000005668	larsb	96	61.754	ENSCAPG00000015676	LARS	97	61.754	Cavia_aperea
ENSPREG00000005668	larsb	100	76.520	ENSCPOG00000012329	LARS	100	76.520	Cavia_porcellus
ENSPREG00000005668	larsb	99	78.662	ENSCCAG00000020789	LARS	99	78.662	Cebus_capucinus
ENSPREG00000005668	larsb	97	78.416	ENSCATG00000033463	LARS	100	78.742	Cercocebus_atys
ENSPREG00000005668	larsb	100	77.280	ENSCLAG00000011193	LARS	100	77.280	Chinchilla_lanigera
ENSPREG00000005668	larsb	99	78.224	ENSCSAG00000012280	LARS	97	78.224	Chlorocebus_sabaeus
ENSPREG00000005668	larsb	93	71.882	ENSCHOG00000009309	LARS	90	71.882	Choloepus_hoffmanni
ENSPREG00000005668	larsb	99	79.628	ENSCPBG00000008415	LARS	99	80.359	Chrysemys_picta_bellii
ENSPREG00000005668	larsb	99	63.912	ENSCING00000008535	-	99	63.406	Ciona_intestinalis
ENSPREG00000005668	larsb	99	63.215	ENSCSAVG00000009040	-	98	70.415	Ciona_savignyi
ENSPREG00000005668	larsb	100	78.209	ENSCANG00000031137	LARS	100	78.209	Colobus_angolensis_palliatus
ENSPREG00000005668	larsb	93	72.429	ENSCGRG00001004647	Lars	99	72.429	Cricetulus_griseus_chok1gshd
ENSPREG00000005668	larsb	100	74.093	ENSCGRG00000007284	Lars	100	74.093	Cricetulus_griseus_crigri
ENSPREG00000005668	larsb	100	91.484	ENSCSEG00000014984	larsb	100	91.231	Cynoglossus_semilaevis
ENSPREG00000005668	larsb	100	95.693	ENSCVAG00000014685	larsb	100	95.693	Cyprinodon_variegatus
ENSPREG00000005668	larsb	67	87.860	ENSDARG00000019280	larsb	100	87.860	Danio_rerio
ENSPREG00000005668	larsb	96	77.312	ENSDNOG00000017963	LARS	100	77.749	Dasypus_novemcinctus
ENSPREG00000005668	larsb	100	72.850	ENSDORG00000014913	Lars	100	72.850	Dipodomys_ordii
ENSPREG00000005668	larsb	99	58.138	FBgn0284253	LeuRS	99	58.557	Drosophila_melanogaster
ENSPREG00000005668	larsb	94	63.016	ENSETEG00000003145	LARS	100	63.016	Echinops_telfairi
ENSPREG00000005668	larsb	92	60.474	ENSEBUG00000014985	larsb	97	60.200	Eptatretus_burgeri
ENSPREG00000005668	larsb	100	77.872	ENSEASG00005020569	LARS	100	78.145	Equus_asinus_asinus
ENSPREG00000005668	larsb	100	77.787	ENSECAG00000008963	LARS	100	78.654	Equus_caballus
ENSPREG00000005668	larsb	88	67.584	ENSEEUG00000014854	LARS	92	62.830	Erinaceus_europaeus
ENSPREG00000005668	larsb	100	86.486	ENSELUG00000023311	larsb	100	86.486	Esox_lucius
ENSPREG00000005668	larsb	99	77.919	ENSFCAG00000008715	LARS	100	79.888	Felis_catus
ENSPREG00000005668	larsb	100	78.565	ENSFALG00000003209	LARS	93	78.312	Ficedula_albicollis
ENSPREG00000005668	larsb	100	76.858	ENSFDAG00000020764	LARS	100	76.858	Fukomys_damarensis
ENSPREG00000005668	larsb	91	94.650	ENSFHEG00000010437	larsb	100	94.650	Fundulus_heteroclitus
ENSPREG00000005668	larsb	99	86.475	ENSGMOG00000013645	larsb	99	86.475	Gadus_morhua
ENSPREG00000005668	larsb	100	78.872	ENSGALG00000007494	LARS	100	78.872	Gallus_gallus
ENSPREG00000005668	larsb	100	96.959	ENSGAFG00000005029	larsb	100	96.959	Gambusia_affinis
ENSPREG00000005668	larsb	99	88.494	ENSGACG00000020720	larsb	99	88.409	Gasterosteus_aculeatus
ENSPREG00000005668	larsb	99	79.121	ENSGAGG00000002353	LARS	99	78.934	Gopherus_agassizii
ENSPREG00000005668	larsb	100	78.041	ENSGGOG00000004103	LARS	100	78.041	Gorilla_gorilla
ENSPREG00000005668	larsb	99	91.341	ENSHBUG00000003051	larsb	100	93.466	Haplochromis_burtoni
ENSPREG00000005668	larsb	100	76.943	ENSHGLG00000006937	LARS	100	76.943	Heterocephalus_glaber_female
ENSPREG00000005668	larsb	100	76.943	ENSHGLG00100002801	LARS	100	76.943	Heterocephalus_glaber_male
ENSPREG00000005668	larsb	99	90.363	ENSHCOG00000003651	larsb	100	90.363	Hippocampus_comes
ENSPREG00000005668	larsb	100	85.063	ENSIPUG00000010756	lars	100	84.893	Ictalurus_punctatus
ENSPREG00000005668	larsb	100	77.534	ENSSTOG00000002356	LARS	100	77.534	Ictidomys_tridecemlineatus
ENSPREG00000005668	larsb	100	76.436	ENSJJAG00000015265	Lars	100	76.436	Jaculus_jaculus
ENSPREG00000005668	larsb	100	93.249	ENSKMAG00000009903	larsb	100	93.249	Kryptolebias_marmoratus
ENSPREG00000005668	larsb	100	92.489	ENSLBEG00000025237	larsb	100	92.405	Labrus_bergylta
ENSPREG00000005668	larsb	100	78.535	ENSLACG00000009321	LARS	100	78.788	Latimeria_chalumnae
ENSPREG00000005668	larsb	99	83.249	ENSLOCG00000010442	larsb	99	83.164	Lepisosteus_oculatus
ENSPREG00000005668	larsb	99	77.365	ENSLAFG00000000318	LARS	100	77.327	Loxodonta_africana
ENSPREG00000005668	larsb	100	78.125	ENSMFAG00000038685	LARS	100	78.125	Macaca_fascicularis
ENSPREG00000005668	larsb	100	78.125	ENSMMUG00000029787	LARS	100	78.125	Macaca_mulatta
ENSPREG00000005668	larsb	99	76.227	ENSMNEG00000044014	LARS	99	76.227	Macaca_nemestrina
ENSPREG00000005668	larsb	99	78.173	ENSMLEG00000037563	LARS	99	78.173	Mandrillus_leucophaeus
ENSPREG00000005668	larsb	100	93.074	ENSMAMG00000021385	larsb	100	93.074	Mastacembelus_armatus
ENSPREG00000005668	larsb	100	93.159	ENSMZEG00005002662	larsb	100	93.159	Maylandia_zebra
ENSPREG00000005668	larsb	96	79.528	ENSMGAG00000009388	LARS	100	79.528	Meleagris_gallopavo
ENSPREG00000005668	larsb	99	67.259	ENSMAUG00000003063	Lars	93	78.448	Mesocricetus_auratus
ENSPREG00000005668	larsb	100	64.865	ENSMICG00000035435	-	100	64.865	Microcebus_murinus
ENSPREG00000005668	larsb	100	78.378	ENSMICG00000035589	-	100	78.378	Microcebus_murinus
ENSPREG00000005668	larsb	100	76.203	ENSMOCG00000002092	Lars	100	76.203	Microtus_ochrogaster
ENSPREG00000005668	larsb	100	87.490	ENSMMOG00000013802	larsb	100	87.238	Mola_mola
ENSPREG00000005668	larsb	99	72.250	ENSMODG00000010231	LARS	99	72.250	Monodelphis_domestica
ENSPREG00000005668	larsb	99	89.907	ENSMALG00000018444	larsb	99	89.907	Monopterus_albus
ENSPREG00000005668	larsb	100	76.456	MGP_CAROLIEiJ_G0022225	Lars	100	76.456	Mus_caroli
ENSPREG00000005668	larsb	100	76.034	ENSMUSG00000024493	Lars	100	76.034	Mus_musculus
ENSPREG00000005668	larsb	100	76.203	MGP_PahariEiJ_G0018958	Lars	100	76.203	Mus_pahari
ENSPREG00000005668	larsb	100	76.371	MGP_SPRETEiJ_G0023135	Lars	100	76.371	Mus_spretus
ENSPREG00000005668	larsb	100	78.209	ENSMPUG00000007844	LARS	100	78.209	Mustela_putorius_furo
ENSPREG00000005668	larsb	99	77.008	ENSMLUG00000001125	LARS	100	77.008	Myotis_lucifugus
ENSPREG00000005668	larsb	100	76.182	ENSNGAG00000011596	Lars	100	76.182	Nannospalax_galili
ENSPREG00000005668	larsb	100	93.159	ENSNBRG00000005764	larsb	100	93.159	Neolamprologus_brichardi
ENSPREG00000005668	larsb	99	77.834	ENSNLEG00000009816	LARS	99	77.834	Nomascus_leucogenys
ENSPREG00000005668	larsb	53	81.081	ENSMEUG00000002332	-	60	75.261	Notamacropus_eugenii
ENSPREG00000005668	larsb	81	81.183	ENSOPRG00000003076	LARS	83	81.183	Ochotona_princeps
ENSPREG00000005668	larsb	99	75.021	ENSODEG00000004882	LARS	99	75.021	Octodon_degus
ENSPREG00000005668	larsb	100	93.412	ENSONIG00000008493	larsb	100	93.412	Oreochromis_niloticus
ENSPREG00000005668	larsb	99	75.589	ENSOANG00000005755	LARS	99	75.589	Ornithorhynchus_anatinus
ENSPREG00000005668	larsb	100	77.703	ENSOCUG00000015684	LARS	100	77.703	Oryctolagus_cuniculus
ENSPREG00000005668	larsb	100	92.145	ENSORLG00000001622	larsb	100	92.145	Oryzias_latipes
ENSPREG00000005668	larsb	100	92.145	ENSORLG00020019950	larsb	100	92.145	Oryzias_latipes_hni
ENSPREG00000005668	larsb	100	92.314	ENSORLG00015003895	larsb	100	92.314	Oryzias_latipes_hsok
ENSPREG00000005668	larsb	100	92.399	ENSOMEG00000005677	larsb	100	92.399	Oryzias_melastigma
ENSPREG00000005668	larsb	96	76.000	ENSOGAG00000008750	LARS	100	76.000	Otolemur_garnettii
ENSPREG00000005668	larsb	99	77.430	ENSOARG00000002454	-	100	77.430	Ovis_aries
ENSPREG00000005668	larsb	100	77.365	ENSOARG00000015911	-	99	77.365	Ovis_aries
ENSPREG00000005668	larsb	99	78.173	ENSPPAG00000027964	LARS	99	78.173	Pan_paniscus
ENSPREG00000005668	larsb	100	78.125	ENSPPRG00000023492	LARS	100	78.125	Panthera_pardus
ENSPREG00000005668	larsb	100	77.956	ENSPTIG00000013110	LARS	100	77.956	Panthera_tigris_altaica
ENSPREG00000005668	larsb	100	78.041	ENSPTRG00000017372	LARS	100	78.041	Pan_troglodytes
ENSPREG00000005668	larsb	100	78.125	ENSPANG00000002663	LARS	100	78.125	Papio_anubis
ENSPREG00000005668	larsb	98	84.542	ENSPKIG00000006650	larsb	99	81.481	Paramormyrops_kingsleyae
ENSPREG00000005668	larsb	99	79.205	ENSPSIG00000015641	LARS	100	78.952	Pelodiscus_sinensis
ENSPREG00000005668	larsb	68	92.875	ENSPMGG00000019556	LARS	100	92.875	Periophthalmus_magnuspinnatus
ENSPREG00000005668	larsb	100	72.583	ENSPEMG00000010933	Lars	100	72.583	Peromyscus_maniculatus_bairdii
ENSPREG00000005668	larsb	50	60.331	ENSPMAG00000005301	larsb	99	60.331	Petromyzon_marinus
ENSPREG00000005668	larsb	100	76.436	ENSPCIG00000030572	LARS	100	76.436	Phascolarctos_cinereus
ENSPREG00000005668	larsb	100	98.057	ENSPFOG00000002361	larsb	100	98.057	Poecilia_formosa
ENSPREG00000005668	larsb	100	97.973	ENSPLAG00000016550	larsb	100	97.973	Poecilia_latipinna
ENSPREG00000005668	larsb	100	98.057	ENSPMEG00000018422	larsb	100	98.057	Poecilia_mexicana
ENSPREG00000005668	larsb	99	76.734	ENSPPYG00000015908	LARS	97	76.734	Pongo_abelii
ENSPREG00000005668	larsb	82	72.193	ENSPCAG00000005621	LARS	96	64.798	Procavia_capensis
ENSPREG00000005668	larsb	100	77.196	ENSPCOG00000019325	LARS	100	77.196	Propithecus_coquereli
ENSPREG00000005668	larsb	96	70.053	ENSPVAG00000011237	LARS	99	70.403	Pteropus_vampyrus
ENSPREG00000005668	larsb	100	93.159	ENSPNYG00000015254	larsb	100	93.159	Pundamilia_nyererei
ENSPREG00000005668	larsb	100	85.389	ENSPNAG00000027191	larsb	100	85.389	Pygocentrus_nattereri
ENSPREG00000005668	larsb	100	76.118	ENSRNOG00000018304	Lars	100	76.118	Rattus_norvegicus
ENSPREG00000005668	larsb	94	77.289	ENSRBIG00000043198	LARS	99	77.289	Rhinopithecus_bieti
ENSPREG00000005668	larsb	90	45.826	YPL160W	CDC60	99	45.430	Saccharomyces_cerevisiae
ENSPREG00000005668	larsb	99	75.804	ENSSBOG00000026661	LARS	100	78.687	Saimiri_boliviensis_boliviensis
ENSPREG00000005668	larsb	100	77.637	ENSSHAG00000006084	LARS	100	77.637	Sarcophilus_harrisii
ENSPREG00000005668	larsb	97	84.878	ENSSFOG00015018117	larsb	90	84.878	Scleropages_formosus
ENSPREG00000005668	larsb	88	92.905	ENSSMAG00000004078	larsb	97	92.809	Scophthalmus_maximus
ENSPREG00000005668	larsb	100	93.159	ENSSDUG00000021142	larsb	100	93.159	Seriola_dumerili
ENSPREG00000005668	larsb	100	93.328	ENSSLDG00000007054	larsb	100	93.328	Seriola_lalandi_dorsalis
ENSPREG00000005668	larsb	85	70.000	ENSSARG00000013481	LARS	83	76.724	Sorex_araneus
ENSPREG00000005668	larsb	99	78.228	ENSSPUG00000013805	LARS	99	78.481	Sphenodon_punctatus
ENSPREG00000005668	larsb	100	93.412	ENSSPAG00000012124	larsb	100	93.412	Stegastes_partitus
ENSPREG00000005668	larsb	100	74.578	ENSSSCG00000014411	LARS	100	74.578	Sus_scrofa
ENSPREG00000005668	larsb	99	78.445	ENSTGUG00000000092	-	99	78.191	Taeniopygia_guttata
ENSPREG00000005668	larsb	100	89.020	ENSTRUG00000005358	larsb	100	89.020	Takifugu_rubripes
ENSPREG00000005668	larsb	99	85.114	ENSTNIG00000018214	larsb	100	85.029	Tetraodon_nigroviridis
ENSPREG00000005668	larsb	91	76.680	ENSTBEG00000003757	LARS	94	76.680	Tupaia_belangeri
ENSPREG00000005668	larsb	96	75.723	ENSTTRG00000016712	LARS	96	75.723	Tursiops_truncatus
ENSPREG00000005668	larsb	94	79.032	ENSUAMG00000019907	LARS	99	79.032	Ursus_americanus
ENSPREG00000005668	larsb	100	77.956	ENSUMAG00000010585	LARS	100	77.956	Ursus_maritimus
ENSPREG00000005668	larsb	92	76.846	ENSVPAG00000000557	LARS	92	76.846	Vicugna_pacos
ENSPREG00000005668	larsb	100	78.294	ENSVVUG00000021124	LARS	100	78.294	Vulpes_vulpes
ENSPREG00000005668	larsb	100	79.427	ENSXETG00000002320	lars	100	79.258	Xenopus_tropicalis
ENSPREG00000005668	larsb	100	97.044	ENSXMAG00000001454	larsb	100	97.044	Xiphophorus_maculatus