EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005689 (Gene tree)
Gene ID: 103465136
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4727 bases
Position: chrLG5:22609890-22614616
Accession: 103465136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008325	PseudoU_synth_2	PF00849.22	9.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008422	-	1161	XM_008409735	ENSPREP00000008325	386 (aa)	XP_008407957	-

Gene Model

Click here to download ENSPREG00000005689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005689	rpusd4	80	51.911	ENSG00000165526	RPUSD4	84	50.303	Homo_sapiens
ENSPREG00000005689	rpusd4	97	68.158	ENSAPOG00000011024	rpusd4	94	68.158	Acanthochromis_polyacanthus
ENSPREG00000005689	rpusd4	55	53.846	ENSAMEG00000005953	-	91	53.846	Ailuropoda_melanoleuca
ENSPREG00000005689	rpusd4	87	48.665	ENSAMEG00000000127	-	87	48.665	Ailuropoda_melanoleuca
ENSPREG00000005689	rpusd4	82	73.418	ENSACIG00000003533	rpusd4	92	73.418	Amphilophus_citrinellus
ENSPREG00000005689	rpusd4	97	68.421	ENSAOCG00000015409	rpusd4	93	68.421	Amphiprion_ocellaris
ENSPREG00000005689	rpusd4	97	68.421	ENSAPEG00000018935	rpusd4	93	68.421	Amphiprion_percula
ENSPREG00000005689	rpusd4	98	66.494	ENSATEG00000008059	rpusd4	94	66.494	Anabas_testudineus
ENSPREG00000005689	rpusd4	65	53.175	ENSAPLG00000013250	RPUSD4	87	53.101	Anas_platyrhynchos
ENSPREG00000005689	rpusd4	80	50.000	ENSACAG00000000189	RPUSD4	84	50.000	Anolis_carolinensis
ENSPREG00000005689	rpusd4	82	49.221	ENSANAG00000024050	RPUSD4	84	49.221	Aotus_nancymaae
ENSPREG00000005689	rpusd4	98	70.419	ENSACLG00000020996	rpusd4	97	70.419	Astatotilapia_calliptera
ENSPREG00000005689	rpusd4	88	55.556	ENSAMXG00000031479	rpusd4	91	57.716	Astyanax_mexicanus
ENSPREG00000005689	rpusd4	77	52.333	ENSBTAG00000020900	RPUSD4	79	51.456	Bos_taurus
ENSPREG00000005689	rpusd4	84	49.387	ENSCJAG00000042850	RPUSD4	80	49.387	Callithrix_jacchus
ENSPREG00000005689	rpusd4	76	52.685	ENSCAFG00000010488	RPUSD4	87	50.445	Canis_familiaris
ENSPREG00000005689	rpusd4	76	52.685	ENSCAFG00020010621	RPUSD4	87	50.445	Canis_lupus_dingo
ENSPREG00000005689	rpusd4	77	51.667	ENSCHIG00000009975	RPUSD4	79	50.645	Capra_hircus
ENSPREG00000005689	rpusd4	87	50.442	ENSTSYG00000008456	RPUSD4	87	50.442	Carlito_syrichta
ENSPREG00000005689	rpusd4	61	47.458	ENSCAPG00000006040	RPUSD4	89	47.458	Cavia_aperea
ENSPREG00000005689	rpusd4	91	48.451	ENSCPOG00000014971	RPUSD4	91	48.451	Cavia_porcellus
ENSPREG00000005689	rpusd4	84	49.080	ENSCCAG00000027838	RPUSD4	85	49.080	Cebus_capucinus
ENSPREG00000005689	rpusd4	84	49.394	ENSCATG00000041570	RPUSD4	84	49.394	Cercocebus_atys
ENSPREG00000005689	rpusd4	91	49.718	ENSCLAG00000016553	RPUSD4	91	49.718	Chinchilla_lanigera
ENSPREG00000005689	rpusd4	84	48.318	ENSCSAG00000002274	RPUSD4	84	48.318	Chlorocebus_sabaeus
ENSPREG00000005689	rpusd4	69	49.627	ENSCHOG00000010249	RPUSD4	93	49.627	Choloepus_hoffmanni
ENSPREG00000005689	rpusd4	68	55.133	ENSCPBG00000011175	RPUSD4	90	55.133	Chrysemys_picta_bellii
ENSPREG00000005689	rpusd4	67	40.684	ENSCSAVG00000000872	-	50	40.684	Ciona_savignyi
ENSPREG00000005689	rpusd4	84	50.152	ENSCANG00000039684	RPUSD4	84	50.152	Colobus_angolensis_palliatus
ENSPREG00000005689	rpusd4	84	50.760	ENSCGRG00001024141	Rpusd4	85	50.760	Cricetulus_griseus_chok1gshd
ENSPREG00000005689	rpusd4	84	50.760	ENSCGRG00000014415	Rpusd4	85	50.760	Cricetulus_griseus_crigri
ENSPREG00000005689	rpusd4	96	77.212	ENSCVAG00000000392	rpusd4	93	80.000	Cyprinodon_variegatus
ENSPREG00000005689	rpusd4	96	77.212	ENSCVAG00000008761	rpusd4	95	77.212	Cyprinodon_variegatus
ENSPREG00000005689	rpusd4	81	57.962	ENSDARG00000012674	rpusd4	86	57.962	Danio_rerio
ENSPREG00000005689	rpusd4	82	50.467	ENSDNOG00000020026	RPUSD4	83	50.467	Dasypus_novemcinctus
ENSPREG00000005689	rpusd4	92	47.207	ENSDORG00000016717	Rpusd4	90	47.765	Dipodomys_ordii
ENSPREG00000005689	rpusd4	85	50.453	ENSETEG00000013953	RPUSD4	86	50.453	Echinops_telfairi
ENSPREG00000005689	rpusd4	87	48.665	ENSEASG00005022982	RPUSD4	86	48.665	Equus_asinus_asinus
ENSPREG00000005689	rpusd4	87	48.961	ENSECAG00000000557	RPUSD4	86	48.961	Equus_caballus
ENSPREG00000005689	rpusd4	65	57.407	ENSEEUG00000014036	RPUSD4	66	57.407	Erinaceus_europaeus
ENSPREG00000005689	rpusd4	92	57.459	ENSELUG00000008075	rpusd4	94	57.459	Esox_lucius
ENSPREG00000005689	rpusd4	89	48.266	ENSFCAG00000029789	RPUSD4	89	48.555	Felis_catus
ENSPREG00000005689	rpusd4	81	47.436	ENSFALG00000005171	RPUSD4	91	47.436	Ficedula_albicollis
ENSPREG00000005689	rpusd4	90	48.864	ENSFDAG00000014307	RPUSD4	92	48.864	Fukomys_damarensis
ENSPREG00000005689	rpusd4	96	79.459	ENSFHEG00000004329	rpusd4	95	79.459	Fundulus_heteroclitus
ENSPREG00000005689	rpusd4	84	62.346	ENSGMOG00000017726	rpusd4	96	62.195	Gadus_morhua
ENSPREG00000005689	rpusd4	72	54.122	ENSGALG00000024326	RPUSD4	92	49.096	Gallus_gallus
ENSPREG00000005689	rpusd4	98	90.789	ENSGAFG00000021559	rpusd4	97	90.789	Gambusia_affinis
ENSPREG00000005689	rpusd4	87	69.760	ENSGACG00000001657	rpusd4	94	74.539	Gasterosteus_aculeatus
ENSPREG00000005689	rpusd4	88	49.853	ENSGAGG00000000132	RPUSD4	90	49.853	Gopherus_agassizii
ENSPREG00000005689	rpusd4	82	51.393	ENSGGOG00000016494	RPUSD4	87	50.147	Gorilla_gorilla
ENSPREG00000005689	rpusd4	98	70.833	ENSHBUG00000022838	rpusd4	97	70.833	Haplochromis_burtoni
ENSPREG00000005689	rpusd4	88	49.563	ENSHGLG00000002285	RPUSD4	88	49.563	Heterocephalus_glaber_female
ENSPREG00000005689	rpusd4	88	49.563	ENSHGLG00100006385	RPUSD4	88	49.563	Heterocephalus_glaber_male
ENSPREG00000005689	rpusd4	98	65.274	ENSHCOG00000006612	rpusd4	97	65.274	Hippocampus_comes
ENSPREG00000005689	rpusd4	88	56.268	ENSIPUG00000023879	rusd4	87	56.268	Ictalurus_punctatus
ENSPREG00000005689	rpusd4	87	50.148	ENSSTOG00000025280	RPUSD4	90	50.148	Ictidomys_tridecemlineatus
ENSPREG00000005689	rpusd4	90	48.596	ENSJJAG00000018673	Rpusd4	91	48.596	Jaculus_jaculus
ENSPREG00000005689	rpusd4	98	66.667	ENSKMAG00000021805	rpusd4	98	66.667	Kryptolebias_marmoratus
ENSPREG00000005689	rpusd4	90	68.750	ENSLBEG00000020394	rpusd4	88	75.000	Labrus_bergylta
ENSPREG00000005689	rpusd4	81	51.735	ENSLACG00000011028	RPUSD4	84	49.565	Latimeria_chalumnae
ENSPREG00000005689	rpusd4	83	44.785	ENSLOCG00000003124	rpusd4	85	44.785	Lepisosteus_oculatus
ENSPREG00000005689	rpusd4	83	51.242	ENSLAFG00000005211	RPUSD4	95	44.128	Loxodonta_africana
ENSPREG00000005689	rpusd4	84	49.697	ENSMFAG00000039513	RPUSD4	84	49.697	Macaca_fascicularis
ENSPREG00000005689	rpusd4	84	49.394	ENSMMUG00000007933	RPUSD4	84	49.394	Macaca_mulatta
ENSPREG00000005689	rpusd4	84	50.000	ENSMNEG00000027414	RPUSD4	84	50.000	Macaca_nemestrina
ENSPREG00000005689	rpusd4	84	49.697	ENSMLEG00000042461	RPUSD4	84	49.697	Mandrillus_leucophaeus
ENSPREG00000005689	rpusd4	91	73.219	ENSMAMG00000023839	rpusd4	90	73.219	Mastacembelus_armatus
ENSPREG00000005689	rpusd4	98	70.419	ENSMZEG00005011999	rpusd4	97	70.419	Maylandia_zebra
ENSPREG00000005689	rpusd4	68	53.759	ENSMGAG00000000840	RPUSD4	94	49.032	Meleagris_gallopavo
ENSPREG00000005689	rpusd4	87	49.852	ENSMAUG00000010280	Rpusd4	87	49.852	Mesocricetus_auratus
ENSPREG00000005689	rpusd4	83	50.617	ENSMICG00000015979	RPUSD4	84	54.064	Microcebus_murinus
ENSPREG00000005689	rpusd4	84	49.080	ENSMOCG00000000661	Rpusd4	84	49.080	Microtus_ochrogaster
ENSPREG00000005689	rpusd4	81	71.885	ENSMMOG00000021731	rpusd4	93	71.885	Mola_mola
ENSPREG00000005689	rpusd4	86	50.149	ENSMODG00000004521	RPUSD4	84	50.149	Monodelphis_domestica
ENSPREG00000005689	rpusd4	77	73.154	ENSMALG00000005839	rpusd4	95	70.513	Monopterus_albus
ENSPREG00000005689	rpusd4	89	48.442	MGP_CAROLIEiJ_G0031954	Rpusd4	91	48.442	Mus_caroli
ENSPREG00000005689	rpusd4	89	49.292	ENSMUSG00000032044	Rpusd4	91	49.292	Mus_musculus
ENSPREG00000005689	rpusd4	85	49.699	MGP_PahariEiJ_G0014819	Rpusd4	85	49.699	Mus_pahari
ENSPREG00000005689	rpusd4	89	48.442	MGP_SPRETEiJ_G0033078	Rpusd4	91	48.442	Mus_spretus
ENSPREG00000005689	rpusd4	87	49.555	ENSMPUG00000006608	RPUSD4	87	49.555	Mustela_putorius_furo
ENSPREG00000005689	rpusd4	80	50.323	ENSMLUG00000017328	-	80	50.323	Myotis_lucifugus
ENSPREG00000005689	rpusd4	62	50.000	ENSMLUG00000029348	-	93	50.000	Myotis_lucifugus
ENSPREG00000005689	rpusd4	85	51.506	ENSNGAG00000020847	Rpusd4	85	51.506	Nannospalax_galili
ENSPREG00000005689	rpusd4	83	75.389	ENSNBRG00000005207	rpusd4	92	75.389	Neolamprologus_brichardi
ENSPREG00000005689	rpusd4	84	50.303	ENSNLEG00000007465	RPUSD4	84	50.303	Nomascus_leucogenys
ENSPREG00000005689	rpusd4	81	52.548	ENSMEUG00000004370	RPUSD4	82	52.548	Notamacropus_eugenii
ENSPREG00000005689	rpusd4	94	47.671	ENSODEG00000004577	RPUSD4	94	47.671	Octodon_degus
ENSPREG00000005689	rpusd4	98	70.942	ENSONIG00000018879	rpusd4	97	70.942	Oreochromis_niloticus
ENSPREG00000005689	rpusd4	72	50.000	ENSOANG00000007247	RPUSD4	89	50.000	Ornithorhynchus_anatinus
ENSPREG00000005689	rpusd4	94	48.501	ENSOCUG00000017039	RPUSD4	92	48.501	Oryctolagus_cuniculus
ENSPREG00000005689	rpusd4	90	67.241	ENSORLG00000002750	rpusd4	93	67.241	Oryzias_latipes
ENSPREG00000005689	rpusd4	89	66.763	ENSORLG00020002044	rpusd4	85	66.763	Oryzias_latipes_hni
ENSPREG00000005689	rpusd4	89	66.185	ENSORLG00015020034	rpusd4	85	66.185	Oryzias_latipes_hsok
ENSPREG00000005689	rpusd4	89	70.262	ENSOMEG00000004861	rpusd4	83	70.262	Oryzias_melastigma
ENSPREG00000005689	rpusd4	84	50.755	ENSOGAG00000008922	RPUSD4	89	49.856	Otolemur_garnettii
ENSPREG00000005689	rpusd4	77	51.667	ENSOARG00000012238	RPUSD4	79	50.645	Ovis_aries
ENSPREG00000005689	rpusd4	80	51.911	ENSPPAG00000042883	RPUSD4	79	50.606	Pan_paniscus
ENSPREG00000005689	rpusd4	89	48.555	ENSPPRG00000003081	RPUSD4	89	48.555	Panthera_pardus
ENSPREG00000005689	rpusd4	89	48.555	ENSPTIG00000012059	RPUSD4	89	48.555	Panthera_tigris_altaica
ENSPREG00000005689	rpusd4	80	51.911	ENSPTRG00000004454	RPUSD4	84	50.606	Pan_troglodytes
ENSPREG00000005689	rpusd4	84	49.697	ENSPANG00000015040	RPUSD4	84	49.697	Papio_anubis
ENSPREG00000005689	rpusd4	87	56.047	ENSPKIG00000023986	rpusd4	85	56.047	Paramormyrops_kingsleyae
ENSPREG00000005689	rpusd4	69	56.391	ENSPSIG00000014268	RPUSD4	83	56.391	Pelodiscus_sinensis
ENSPREG00000005689	rpusd4	86	66.168	ENSPMGG00000002806	rpusd4	91	65.964	Periophthalmus_magnuspinnatus
ENSPREG00000005689	rpusd4	83	45.062	ENSPEMG00000000278	Rpusd4	82	45.062	Peromyscus_maniculatus_bairdii
ENSPREG00000005689	rpusd4	74	41.195	ENSPMAG00000008183	rpusd4	91	41.195	Petromyzon_marinus
ENSPREG00000005689	rpusd4	83	51.852	ENSPCIG00000010212	RPUSD4	87	51.852	Phascolarctos_cinereus
ENSPREG00000005689	rpusd4	95	94.054	ENSPFOG00000019030	rpusd4	97	94.054	Poecilia_formosa
ENSPREG00000005689	rpusd4	98	94.751	ENSPLAG00000016848	rpusd4	97	94.751	Poecilia_latipinna
ENSPREG00000005689	rpusd4	100	95.349	ENSPMEG00000017534	rpusd4	100	95.349	Poecilia_mexicana
ENSPREG00000005689	rpusd4	84	50.000	ENSPPYG00000004043	RPUSD4	84	50.000	Pongo_abelii
ENSPREG00000005689	rpusd4	65	55.901	ENSPCAG00000000753	RPUSD4	66	55.901	Procavia_capensis
ENSPREG00000005689	rpusd4	83	48.916	ENSPCOG00000020694	RPUSD4	84	48.916	Propithecus_coquereli
ENSPREG00000005689	rpusd4	84	49.387	ENSPVAG00000000988	RPUSD4	85	49.387	Pteropus_vampyrus
ENSPREG00000005689	rpusd4	98	70.833	ENSPNYG00000009652	rpusd4	97	70.833	Pundamilia_nyererei
ENSPREG00000005689	rpusd4	92	54.596	ENSPNAG00000012264	rpusd4	91	54.596	Pygocentrus_nattereri
ENSPREG00000005689	rpusd4	90	49.153	ENSRNOG00000011567	Rpusd4	91	49.153	Rattus_norvegicus
ENSPREG00000005689	rpusd4	84	49.544	ENSRBIG00000034842	RPUSD4	84	49.544	Rhinopithecus_bieti
ENSPREG00000005689	rpusd4	84	49.544	ENSRROG00000039753	RPUSD4	84	49.544	Rhinopithecus_roxellana
ENSPREG00000005689	rpusd4	85	48.048	ENSSBOG00000030413	RPUSD4	87	48.048	Saimiri_boliviensis_boliviensis
ENSPREG00000005689	rpusd4	74	52.613	ENSSHAG00000008304	RPUSD4	93	52.613	Sarcophilus_harrisii
ENSPREG00000005689	rpusd4	81	57.143	ENSSFOG00015006203	rpusd4	85	57.143	Scleropages_formosus
ENSPREG00000005689	rpusd4	99	64.508	ENSSMAG00000020978	rpusd4	99	64.508	Scophthalmus_maximus
ENSPREG00000005689	rpusd4	97	67.895	ENSSDUG00000013399	rpusd4	97	67.895	Seriola_dumerili
ENSPREG00000005689	rpusd4	98	67.273	ENSSLDG00000023507	rpusd4	98	67.273	Seriola_lalandi_dorsalis
ENSPREG00000005689	rpusd4	72	55.160	ENSSPUG00000001401	RPUSD4	93	49.143	Sphenodon_punctatus
ENSPREG00000005689	rpusd4	97	68.783	ENSSPAG00000012163	rpusd4	96	68.783	Stegastes_partitus
ENSPREG00000005689	rpusd4	85	48.193	ENSSSCG00000015233	RPUSD4	85	48.193	Sus_scrofa
ENSPREG00000005689	rpusd4	73	50.352	ENSTGUG00000000773	RPUSD4	95	50.352	Taeniopygia_guttata
ENSPREG00000005689	rpusd4	98	63.636	ENSTRUG00000012283	rpusd4	97	63.636	Takifugu_rubripes
ENSPREG00000005689	rpusd4	89	68.805	ENSTNIG00000014676	rpusd4	86	68.805	Tetraodon_nigroviridis
ENSPREG00000005689	rpusd4	85	49.401	ENSTTRG00000001555	RPUSD4	87	48.968	Tursiops_truncatus
ENSPREG00000005689	rpusd4	87	49.263	ENSUMAG00000002219	RPUSD4	88	49.263	Ursus_maritimus
ENSPREG00000005689	rpusd4	62	46.694	ENSVPAG00000001066	RPUSD4	88	46.694	Vicugna_pacos
ENSPREG00000005689	rpusd4	76	52.685	ENSVVUG00000020101	RPUSD4	87	50.445	Vulpes_vulpes
ENSPREG00000005689	rpusd4	98	90.789	ENSXCOG00000004676	rpusd4	97	90.789	Xiphophorus_couchianus
ENSPREG00000005689	rpusd4	98	90.789	ENSXMAG00000023351	rpusd4	97	90.789	Xiphophorus_maculatus