EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005726 (Gene tree)
Gene ID: 103459998
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 34512 bases
Position: chrKK215286.1:612571-647082
Accession: 103459998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008379	La	PF05383.17	3.4e-19	1	1
ENSPREP00000008406	La	PF05383.17	3.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008504	-	3178	-	ENSPREP00000008406	984 (aa)	-	-
ENSPRET00000008477	-	4311	XM_008401951	ENSPREP00000008379	978 (aa)	XP_008400173	UPI0004A472C7

Gene Model

Click here to download ENSPREG00000005726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005726	larp1	95	67.962	ENSG00000155506	LARP1	90	80.606	Homo_sapiens
ENSPREG00000005726	larp1	88	93.213	ENSAPOG00000020685	larp1	85	95.283	Acanthochromis_polyacanthus
ENSPREG00000005726	larp1	95	67.812	ENSAMEG00000016673	LARP1	96	67.887	Ailuropoda_melanoleuca
ENSPREG00000005726	larp1	99	75.180	ENSACIG00000012994	larp1	86	74.871	Amphilophus_citrinellus
ENSPREG00000005726	larp1	86	86.620	ENSAOCG00000007792	larp1	100	86.199	Amphiprion_ocellaris
ENSPREG00000005726	larp1	99	86.858	ENSAPEG00000022246	larp1	89	86.489	Amphiprion_percula
ENSPREG00000005726	larp1	95	86.049	ENSATEG00000013523	larp1	89	85.253	Anabas_testudineus
ENSPREG00000005726	larp1	92	70.011	ENSAPLG00000007559	LARP1	99	69.957	Anas_platyrhynchos
ENSPREG00000005726	larp1	99	67.433	ENSACAG00000004071	LARP1	97	70.222	Anolis_carolinensis
ENSPREG00000005726	larp1	95	67.820	ENSANAG00000029949	LARP1	96	65.240	Aotus_nancymaae
ENSPREG00000005726	larp1	99	85.772	ENSACLG00000015256	larp1	99	85.569	Astatotilapia_calliptera
ENSPREG00000005726	larp1	95	79.572	ENSAMXG00000000859	larp1	85	78.846	Astyanax_mexicanus
ENSPREG00000005726	larp1	95	68.410	ENSBTAG00000008443	LARP1	84	68.305	Bos_taurus
ENSPREG00000005726	larp1	95	67.925	ENSCJAG00000004454	LARP1	90	67.644	Callithrix_jacchus
ENSPREG00000005726	larp1	95	68.058	ENSCAFG00000017639	LARP1	97	67.745	Canis_familiaris
ENSPREG00000005726	larp1	86	70.595	ENSCAFG00020023860	LARP1	95	70.656	Canis_lupus_dingo
ENSPREG00000005726	larp1	95	68.201	ENSCHIG00000014414	LARP1	86	66.284	Capra_hircus
ENSPREG00000005726	larp1	98	67.647	ENSTSYG00000013732	LARP1	96	65.792	Carlito_syrichta
ENSPREG00000005726	larp1	83	69.952	ENSCAPG00000013865	LARP1	86	67.630	Cavia_aperea
ENSPREG00000005726	larp1	94	68.868	ENSCPOG00000003377	LARP1	96	68.344	Cavia_porcellus
ENSPREG00000005726	larp1	95	67.782	ENSCCAG00000025201	LARP1	91	67.326	Cebus_capucinus
ENSPREG00000005726	larp1	94	67.925	ENSCATG00000030675	LARP1	90	67.610	Cercocebus_atys
ENSPREG00000005726	larp1	98	67.513	ENSCLAG00000012755	LARP1	96	66.318	Chinchilla_lanigera
ENSPREG00000005726	larp1	86	67.861	ENSCSAG00000010800	LARP1	95	67.746	Chlorocebus_sabaeus
ENSPREG00000005726	larp1	89	65.154	ENSCHOG00000012716	LARP1	85	64.993	Choloepus_hoffmanni
ENSPREG00000005726	larp1	98	69.731	ENSCPBG00000002173	LARP1	91	70.917	Chrysemys_picta_bellii
ENSPREG00000005726	larp1	94	68.239	ENSCANG00000037418	LARP1	90	67.820	Colobus_angolensis_palliatus
ENSPREG00000005726	larp1	98	67.409	ENSCGRG00001016913	Larp1	87	67.534	Cricetulus_griseus_chok1gshd
ENSPREG00000005726	larp1	94	65.048	ENSCGRG00000009916	Larp1	100	64.836	Cricetulus_griseus_crigri
ENSPREG00000005726	larp1	99	84.985	ENSCSEG00000016431	larp1	89	85.087	Cynoglossus_semilaevis
ENSPREG00000005726	larp1	98	88.669	ENSCVAG00000022687	larp1	89	89.458	Cyprinodon_variegatus
ENSPREG00000005726	larp1	99	71.798	ENSDARG00000101722	larp1	91	72.824	Danio_rerio
ENSPREG00000005726	larp1	98	66.498	ENSDNOG00000012073	LARP1	84	67.503	Dasypus_novemcinctus
ENSPREG00000005726	larp1	98	63.313	ENSDORG00000002897	Larp1	95	65.131	Dipodomys_ordii
ENSPREG00000005726	larp1	91	68.559	ENSETEG00000020251	LARP1	100	68.341	Echinops_telfairi
ENSPREG00000005726	larp1	95	67.601	ENSEASG00005001070	LARP1	84	67.604	Equus_asinus_asinus
ENSPREG00000005726	larp1	95	67.742	ENSECAG00000017002	LARP1	67	68.256	Equus_caballus
ENSPREG00000005726	larp1	92	65.343	ENSEEUG00000001065	LARP1	96	65.451	Erinaceus_europaeus
ENSPREG00000005726	larp1	98	78.221	ENSELUG00000019403	larp1	86	80.655	Esox_lucius
ENSPREG00000005726	larp1	95	68.054	ENSFCAG00000000592	LARP1	90	66.172	Felis_catus
ENSPREG00000005726	larp1	85	71.919	ENSFALG00000008335	LARP1	95	72.064	Ficedula_albicollis
ENSPREG00000005726	larp1	95	68.372	ENSFDAG00000021125	LARP1	96	68.101	Fukomys_damarensis
ENSPREG00000005726	larp1	58	78.846	ENSFHEG00000020307	larp1	92	74.074	Fundulus_heteroclitus
ENSPREG00000005726	larp1	97	69.958	ENSGALG00000040109	LARP1	91	68.877	Gallus_gallus
ENSPREG00000005726	larp1	97	69.089	ENSGAGG00000025113	LARP1	93	73.678	Gopherus_agassizii
ENSPREG00000005726	larp1	95	67.857	ENSGGOG00000006048	LARP1	90	67.681	Gorilla_gorilla
ENSPREG00000005726	larp1	99	86.313	ENSHBUG00000020762	larp1	99	86.108	Haplochromis_burtoni
ENSPREG00000005726	larp1	95	67.012	ENSHGLG00000006267	LARP1	83	67.516	Heterocephalus_glaber_female
ENSPREG00000005726	larp1	97	67.073	ENSHGLG00100014230	-	96	67.820	Heterocephalus_glaber_male
ENSPREG00000005726	larp1	95	58.184	ENSHGLG00100003395	-	85	56.660	Heterocephalus_glaber_male
ENSPREG00000005726	larp1	83	92.732	ENSHCOG00000010786	larp1	81	94.373	Hippocampus_comes
ENSPREG00000005726	larp1	94	73.792	ENSIPUG00000019105	Larp1	90	74.973	Ictalurus_punctatus
ENSPREG00000005726	larp1	95	65.762	ENSSTOG00000005678	LARP1	96	65.622	Ictidomys_tridecemlineatus
ENSPREG00000005726	larp1	95	64.503	ENSJJAG00000016950	Larp1	87	63.580	Jaculus_jaculus
ENSPREG00000005726	larp1	99	87.667	ENSKMAG00000018468	larp1	99	87.667	Kryptolebias_marmoratus
ENSPREG00000005726	larp1	98	83.661	ENSLBEG00000027172	larp1	88	82.825	Labrus_bergylta
ENSPREG00000005726	larp1	91	78.785	ENSLOCG00000012457	larp1	90	78.611	Lepisosteus_oculatus
ENSPREG00000005726	larp1	98	66.028	ENSLAFG00000008991	LARP1	86	66.632	Loxodonta_africana
ENSPREG00000005726	larp1	94	67.925	ENSMFAG00000031651	LARP1	90	67.610	Macaca_fascicularis
ENSPREG00000005726	larp1	94	65.263	ENSMMUG00000009411	LARP1	96	65.158	Macaca_mulatta
ENSPREG00000005726	larp1	86	70.554	ENSMNEG00000039294	LARP1	95	70.208	Macaca_nemestrina
ENSPREG00000005726	larp1	94	68.029	ENSMLEG00000035142	LARP1	90	67.715	Mandrillus_leucophaeus
ENSPREG00000005726	larp1	99	85.348	ENSMAMG00000021788	larp1	88	85.348	Mastacembelus_armatus
ENSPREG00000005726	larp1	99	85.772	ENSMZEG00005009345	larp1	99	85.569	Maylandia_zebra
ENSPREG00000005726	larp1	97	69.175	ENSMGAG00000005696	LARP1	96	68.565	Meleagris_gallopavo
ENSPREG00000005726	larp1	98	67.308	ENSMAUG00000001385	Larp1	87	67.430	Mesocricetus_auratus
ENSPREG00000005726	larp1	95	67.047	ENSMICG00000000837	LARP1	95	70.968	Microcebus_murinus
ENSPREG00000005726	larp1	98	67.510	ENSMOCG00000008920	Larp1	86	68.580	Microtus_ochrogaster
ENSPREG00000005726	larp1	93	62.366	ENSMMOG00000013364	larp1	84	63.832	Mola_mola
ENSPREG00000005726	larp1	98	66.499	ENSMODG00000008663	LARP1	96	68.305	Monodelphis_domestica
ENSPREG00000005726	larp1	99	87.269	ENSMALG00000017180	larp1	91	87.269	Monopterus_albus
ENSPREG00000005726	larp1	98	67.308	MGP_CAROLIEiJ_G0016383	Larp1	86	68.372	Mus_caroli
ENSPREG00000005726	larp1	98	67.409	ENSMUSG00000037331	Larp1	86	68.476	Mus_musculus
ENSPREG00000005726	larp1	98	67.206	MGP_PahariEiJ_G0017518	Larp1	86	68.267	Mus_pahari
ENSPREG00000005726	larp1	98	67.409	MGP_SPRETEiJ_G0017225	Larp1	86	68.476	Mus_spretus
ENSPREG00000005726	larp1	79	65.283	ENSMPUG00000013564	LARP1	84	65.113	Mustela_putorius_furo
ENSPREG00000005726	larp1	98	63.380	ENSMLUG00000002608	LARP1	97	64.308	Myotis_lucifugus
ENSPREG00000005726	larp1	98	65.253	ENSNGAG00000001098	Larp1	95	65.654	Nannospalax_galili
ENSPREG00000005726	larp1	95	84.137	ENSNBRG00000008963	larp1	91	84.137	Neolamprologus_brichardi
ENSPREG00000005726	larp1	95	66.772	ENSNLEG00000016588	LARP1	96	65.319	Nomascus_leucogenys
ENSPREG00000005726	larp1	98	63.066	ENSMEUG00000002957	LARP1	96	64.149	Notamacropus_eugenii
ENSPREG00000005726	larp1	94	68.344	ENSOPRG00000013014	LARP1	96	68.063	Ochotona_princeps
ENSPREG00000005726	larp1	95	67.983	ENSODEG00000010824	LARP1	96	67.925	Octodon_degus
ENSPREG00000005726	larp1	98	82.992	ENSONIG00000017308	larp1	87	82.787	Oreochromis_niloticus
ENSPREG00000005726	larp1	98	68.177	ENSOANG00000005096	LARP1	95	70.157	Ornithorhynchus_anatinus
ENSPREG00000005726	larp1	98	66.835	ENSOCUG00000013066	LARP1	86	68.196	Oryctolagus_cuniculus
ENSPREG00000005726	larp1	99	84.687	ENSORLG00000000824	larp1	100	80.257	Oryzias_latipes
ENSPREG00000005726	larp1	99	84.892	ENSORLG00020022241	larp1	88	84.892	Oryzias_latipes_hni
ENSPREG00000005726	larp1	99	83.145	ENSORLG00015007538	larp1	89	84.584	Oryzias_latipes_hsok
ENSPREG00000005726	larp1	99	83.265	ENSOMEG00000003134	larp1	89	84.600	Oryzias_melastigma
ENSPREG00000005726	larp1	98	66.802	ENSOGAG00000016750	LARP1	96	68.029	Otolemur_garnettii
ENSPREG00000005726	larp1	95	66.771	ENSOARG00000009893	LARP1	97	66.144	Ovis_aries
ENSPREG00000005726	larp1	95	67.857	ENSPPAG00000042993	LARP1	90	67.681	Pan_paniscus
ENSPREG00000005726	larp1	96	66.254	ENSPPRG00000009780	LARP1	91	66.040	Panthera_pardus
ENSPREG00000005726	larp1	96	66.460	ENSPTIG00000007013	LARP1	91	66.562	Panthera_tigris_altaica
ENSPREG00000005726	larp1	95	67.857	ENSPTRG00000017447	LARP1	90	67.681	Pan_troglodytes
ENSPREG00000005726	larp1	94	67.925	ENSPANG00000008080	LARP1	90	67.610	Papio_anubis
ENSPREG00000005726	larp1	97	69.070	ENSPKIG00000017153	-	85	70.110	Paramormyrops_kingsleyae
ENSPREG00000005726	larp1	97	78.115	ENSPKIG00000010096	larp1	84	79.656	Paramormyrops_kingsleyae
ENSPREG00000005726	larp1	92	80.599	ENSPMGG00000011599	larp1	88	81.333	Periophthalmus_magnuspinnatus
ENSPREG00000005726	larp1	98	65.393	ENSPEMG00000022523	Larp1	96	65.828	Peromyscus_maniculatus_bairdii
ENSPREG00000005726	larp1	96	68.438	ENSPCIG00000019242	LARP1	78	69.158	Phascolarctos_cinereus
ENSPREG00000005726	larp1	99	97.835	ENSPFOG00000005836	larp1	89	97.835	Poecilia_formosa
ENSPREG00000005726	larp1	99	97.732	ENSPLAG00000008936	larp1	89	97.732	Poecilia_latipinna
ENSPREG00000005726	larp1	99	97.732	ENSPMEG00000013656	larp1	89	97.732	Poecilia_mexicana
ENSPREG00000005726	larp1	94	66.073	ENSPCAG00000006407	LARP1	97	65.864	Procavia_capensis
ENSPREG00000005726	larp1	94	61.111	ENSPCOG00000016949	LARP1	96	63.494	Propithecus_coquereli
ENSPREG00000005726	larp1	95	68.125	ENSPVAG00000002262	LARP1	84	67.846	Pteropus_vampyrus
ENSPREG00000005726	larp1	99	85.874	ENSPNYG00000007938	larp1	99	85.671	Pundamilia_nyererei
ENSPREG00000005726	larp1	97	76.385	ENSPNAG00000021427	larp1	86	78.717	Pygocentrus_nattereri
ENSPREG00000005726	larp1	98	64.598	ENSRNOG00000031544	Larp1	95	65.759	Rattus_norvegicus
ENSPREG00000005726	larp1	94	68.029	ENSRBIG00000038005	LARP1	90	67.891	Rhinopithecus_bieti
ENSPREG00000005726	larp1	94	68.029	ENSRROG00000034073	LARP1	95	70.323	Rhinopithecus_roxellana
ENSPREG00000005726	larp1	94	67.962	ENSSBOG00000019816	LARP1	96	65.163	Saimiri_boliviensis_boliviensis
ENSPREG00000005726	larp1	98	67.854	ENSSHAG00000011115	LARP1	96	69.368	Sarcophilus_harrisii
ENSPREG00000005726	larp1	96	76.358	ENSSFOG00015018058	-	84	76.566	Scleropages_formosus
ENSPREG00000005726	larp1	98	74.573	ENSSFOG00015020304	larp1	93	76.739	Scleropages_formosus
ENSPREG00000005726	larp1	92	82.143	ENSSMAG00000007468	larp1	84	83.482	Scophthalmus_maximus
ENSPREG00000005726	larp1	99	86.687	ENSSDUG00000000268	larp1	99	80.605	Seriola_dumerili
ENSPREG00000005726	larp1	91	81.614	ENSSLDG00000016505	larp1	99	80.381	Seriola_lalandi_dorsalis
ENSPREG00000005726	larp1	59	83.534	ENSSARG00000013907	-	83	83.600	Sorex_araneus
ENSPREG00000005726	larp1	99	68.807	ENSSPUG00000012179	-	85	68.496	Sphenodon_punctatus
ENSPREG00000005726	larp1	99	86.120	ENSSPAG00000003910	larp1	88	86.120	Stegastes_partitus
ENSPREG00000005726	larp1	95	67.601	ENSSSCG00000017069	LARP1	96	69.511	Sus_scrofa
ENSPREG00000005726	larp1	94	69.515	ENSTGUG00000000704	LARP1	100	69.190	Taeniopygia_guttata
ENSPREG00000005726	larp1	99	83.368	ENSTRUG00000009470	larp1	88	83.368	Takifugu_rubripes
ENSPREG00000005726	larp1	91	67.211	ENSTBEG00000003381	LARP1	99	66.667	Tupaia_belangeri
ENSPREG00000005726	larp1	97	66.193	ENSTTRG00000015934	LARP1	97	67.503	Tursiops_truncatus
ENSPREG00000005726	larp1	95	67.987	ENSUAMG00000019334	LARP1	84	67.322	Ursus_americanus
ENSPREG00000005726	larp1	94	66.071	ENSUMAG00000002934	LARP1	96	67.553	Ursus_maritimus
ENSPREG00000005726	larp1	86	70.595	ENSVVUG00000004644	LARP1	95	70.656	Vulpes_vulpes
ENSPREG00000005726	larp1	95	71.842	ENSXETG00000008413	larp1	88	71.627	Xenopus_tropicalis
ENSPREG00000005726	larp1	81	92.318	ENSXCOG00000004022	larp1	85	92.318	Xiphophorus_couchianus
ENSPREG00000005726	larp1	99	97.216	ENSXMAG00000018780	larp1	89	97.317	Xiphophorus_maculatus