EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005780 (Gene tree)
Gene ID: 103471127
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6275 bases
Position: chrLG10:11367939-11374213
Accession: 103471127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008502	zf-RNPHF	PF08080.12	1.1e-08	1	1
ENSPREP00000008512	zf-RNPHF	PF08080.12	1.2e-08	1	1
ENSPREP00000008512	RRM_1	PF00076.22	2.5e-31	1	3
ENSPREP00000008512	RRM_1	PF00076.22	2.5e-31	2	3
ENSPREP00000008512	RRM_1	PF00076.22	2.5e-31	3	3
ENSPREP00000008502	RRM_1	PF00076.22	2.6e-31	1	3
ENSPREP00000008502	RRM_1	PF00076.22	2.6e-31	2	3
ENSPREP00000008502	RRM_1	PF00076.22	2.6e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008600	-	1370	XM_008419947	ENSPREP00000008502	406 (aa)	XP_008418169	UPI000293D313
ENSPRET00000008610	-	1152	-	ENSPREP00000008512	378 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005780	hnrnph1	86	32.857	ENSPREG00000002991	esrp2	69	32.857
ENSPREG00000005780	hnrnph1	94	59.409	ENSPREG00000009812	HNRNPH3	92	58.491
ENSPREG00000005780	hnrnph1	83	39.873	ENSPREG00000013383	grsf1	76	41.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005780	hnrnph1	100	97.789	ENSAPOG00000016614	hnrnph1	100	97.789	Acanthochromis_polyacanthus
ENSPREG00000005780	hnrnph1	99	97.340	ENSACIG00000008964	hnrnph1	98	97.340	Amphilophus_citrinellus
ENSPREG00000005780	hnrnph1	100	98.280	ENSAOCG00000008372	hnrnph1	100	98.280	Amphiprion_ocellaris
ENSPREG00000005780	hnrnph1	100	98.034	ENSAPEG00000012980	hnrnph1	100	98.034	Amphiprion_percula
ENSPREG00000005780	hnrnph1	100	98.034	ENSATEG00000002792	hnrnph1	100	98.034	Anabas_testudineus
ENSPREG00000005780	hnrnph1	99	71.586	ENSACAG00000016323	-	91	69.784	Anolis_carolinensis
ENSPREG00000005780	hnrnph1	90	89.722	ENSACLG00000003313	hnrnph1	97	94.648	Astatotilapia_calliptera
ENSPREG00000005780	hnrnph1	100	83.495	ENSAMXG00000002483	hnrnph1	99	88.391	Astyanax_mexicanus
ENSPREG00000005780	hnrnph1	99	82.801	ENSAMXG00000030703	hnrnph1l	84	82.310	Astyanax_mexicanus
ENSPREG00000005780	hnrnph1	100	95.599	ENSCSEG00000015891	hnrnph1	100	95.599	Cynoglossus_semilaevis
ENSPREG00000005780	hnrnph1	100	97.537	ENSCVAG00000014097	hnrnph1	100	97.537	Cyprinodon_variegatus
ENSPREG00000005780	hnrnph1	93	87.105	ENSDARG00000040881	hnrnph1	94	87.895	Danio_rerio
ENSPREG00000005780	hnrnph1	95	88.689	ENSDARG00000005551	hnrnph1l	99	86.241	Danio_rerio
ENSPREG00000005780	hnrnph1	96	84.737	ENSELUG00000021437	-	99	87.368	Esox_lucius
ENSPREG00000005780	hnrnph1	100	86.730	ENSELUG00000006715	hnrnph1	100	84.123	Esox_lucius
ENSPREG00000005780	hnrnph1	100	95.320	ENSFHEG00000008474	hnrnph1	100	94.089	Fundulus_heteroclitus
ENSPREG00000005780	hnrnph1	94	89.059	ENSGMOG00000006782	hnrnph1	97	89.059	Gadus_morhua
ENSPREG00000005780	hnrnph1	100	99.754	ENSGAFG00000006280	hnrnph1	100	99.754	Gambusia_affinis
ENSPREG00000005780	hnrnph1	100	90.909	ENSGACG00000018352	hnrnph1	99	89.320	Gasterosteus_aculeatus
ENSPREG00000005780	hnrnph1	90	89.722	ENSHBUG00000010547	hnrnph1	98	94.648	Haplochromis_burtoni
ENSPREG00000005780	hnrnph1	100	84.086	ENSHCOG00000004513	hnrnph1	100	87.648	Hippocampus_comes
ENSPREG00000005780	hnrnph1	95	83.290	ENSIPUG00000024047	hnrnph1l	96	81.327	Ictalurus_punctatus
ENSPREG00000005780	hnrnph1	100	82.039	ENSIPUG00000018262	hnrnph1	100	84.466	Ictalurus_punctatus
ENSPREG00000005780	hnrnph1	100	96.088	ENSKMAG00000018802	hnrnph1	100	96.088	Kryptolebias_marmoratus
ENSPREG00000005780	hnrnph1	100	96.560	ENSLBEG00000027811	hnrnph1	100	96.560	Labrus_bergylta
ENSPREG00000005780	hnrnph1	98	81.183	ENSLOCG00000012510	hnrnph1	91	83.375	Lepisosteus_oculatus
ENSPREG00000005780	hnrnph1	99	54.147	ENSMMUG00000017392	-	83	57.221	Macaca_mulatta
ENSPREG00000005780	hnrnph1	99	53.881	ENSMNEG00000030544	-	83	57.221	Macaca_nemestrina
ENSPREG00000005780	hnrnph1	97	86.792	ENSMAMG00000011478	hnrnph1	99	91.667	Mastacembelus_armatus
ENSPREG00000005780	hnrnph1	100	98.276	ENSMZEG00005009791	hnrnph1	100	98.276	Maylandia_zebra
ENSPREG00000005780	hnrnph1	93	94.211	ENSMMOG00000009064	hnrnph1	98	93.947	Mola_mola
ENSPREG00000005780	hnrnph1	74	51.642	ENSMODG00000002200	-	99	51.045	Monodelphis_domestica
ENSPREG00000005780	hnrnph1	97	89.315	ENSMALG00000003999	hnrnph1	99	94.429	Monopterus_albus
ENSPREG00000005780	hnrnph1	90	89.722	ENSNBRG00000015406	hnrnph1	98	94.648	Neolamprologus_brichardi
ENSPREG00000005780	hnrnph1	100	98.276	ENSONIG00000017754	hnrnph1	100	98.276	Oreochromis_niloticus
ENSPREG00000005780	hnrnph1	100	95.884	ENSORLG00000006932	hnrnph1	100	95.884	Oryzias_latipes
ENSPREG00000005780	hnrnph1	100	95.884	ENSORLG00020007881	hnrnph1	100	95.884	Oryzias_latipes_hni
ENSPREG00000005780	hnrnph1	100	95.884	ENSORLG00015005306	hnrnph1	100	95.884	Oryzias_latipes_hsok
ENSPREG00000005780	hnrnph1	100	98.039	ENSOMEG00000009827	hnrnph1	100	98.039	Oryzias_melastigma
ENSPREG00000005780	hnrnph1	93	82.338	ENSPKIG00000009532	-	93	81.343	Paramormyrops_kingsleyae
ENSPREG00000005780	hnrnph1	100	88.509	ENSPKIG00000018203	hnrnph1l	100	86.797	Paramormyrops_kingsleyae
ENSPREG00000005780	hnrnph1	100	92.629	ENSPMGG00000012151	hnrnph1	100	93.612	Periophthalmus_magnuspinnatus
ENSPREG00000005780	hnrnph1	100	99.261	ENSPFOG00000004097	hnrnph1	100	99.261	Poecilia_formosa
ENSPREG00000005780	hnrnph1	100	99.261	ENSPLAG00000011771	hnrnph1	100	99.261	Poecilia_latipinna
ENSPREG00000005780	hnrnph1	100	99.507	ENSPMEG00000019446	hnrnph1	100	99.507	Poecilia_mexicana
ENSPREG00000005780	hnrnph1	100	98.276	ENSPNYG00000000204	hnrnph1	100	98.276	Pundamilia_nyererei
ENSPREG00000005780	hnrnph1	100	83.010	ENSPNAG00000000439	hnrnph1	100	85.194	Pygocentrus_nattereri
ENSPREG00000005780	hnrnph1	99	83.863	ENSPNAG00000002784	hnrnph1l	99	82.801	Pygocentrus_nattereri
ENSPREG00000005780	hnrnph1	95	89.487	ENSSFOG00015016055	-	94	89.764	Scleropages_formosus
ENSPREG00000005780	hnrnph1	98	90.500	ENSSFOG00015022796	hnrnph1l	100	88.321	Scleropages_formosus
ENSPREG00000005780	hnrnph1	97	94.479	ENSSMAG00000007820	hnrnph1	96	93.963	Scophthalmus_maximus
ENSPREG00000005780	hnrnph1	100	98.280	ENSSDUG00000008785	hnrnph1	100	98.280	Seriola_dumerili
ENSPREG00000005780	hnrnph1	100	98.280	ENSSLDG00000010685	hnrnph1	100	98.280	Seriola_lalandi_dorsalis
ENSPREG00000005780	hnrnph1	100	97.543	ENSSPAG00000009921	hnrnph1	100	97.543	Stegastes_partitus
ENSPREG00000005780	hnrnph1	100	95.813	ENSTRUG00000020069	hnrnph1	100	95.813	Takifugu_rubripes
ENSPREG00000005780	hnrnph1	99	72.398	ENSXETG00000018321	hnrnph1	85	78.706	Xenopus_tropicalis
ENSPREG00000005780	hnrnph1	93	96.164	ENSXCOG00000009133	hnrnph1	97	96.164	Xiphophorus_couchianus
ENSPREG00000005780	hnrnph1	93	100.000	ENSXMAG00000021332	hnrnph1	99	100.000	Xiphophorus_maculatus