EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000005923 (Gene tree)
Gene ID: 103482237
Gene Symbol: rab18a
Alias: -
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7007 bases
Position: chrLG20:1312920-1319926
Accession: 103482237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008676	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008781	-	741	XM_008438262	ENSPREP00000008676	246 (aa)	XP_008436484	UPI0004A4C622

Gene Model

Click here to download ENSPREG00000005923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000005923	rab18a	76	37.433	ENSPREG00000015480	rab6ba	83	40.351
ENSPREG00000005923	rab18a	62	37.821	ENSPREG00000022509	rab23	75	37.821
ENSPREG00000005923	rab18a	70	41.954	ENSPREG00000010146	rab5c	85	40.212
ENSPREG00000005923	rab18a	65	51.852	ENSPREG00000017517	zgc:171927	75	51.852
ENSPREG00000005923	rab18a	78	47.449	ENSPREG00000020321	rab1ab	86	49.714
ENSPREG00000005923	rab18a	69	40.116	ENSPREG00000009597	-	81	40.116
ENSPREG00000005923	rab18a	70	50.867	ENSPREG00000014634	rab30	84	50.867
ENSPREG00000005923	rab18a	59	40.816	ENSPREG00000007017	zgc:101559	63	40.816
ENSPREG00000005923	rab18a	63	33.125	ENSPREG00000010228	dnajc27	82	33.125
ENSPREG00000005923	rab18a	77	46.193	ENSPREG00000003616	rab1ba	83	49.701
ENSPREG00000005923	rab18a	64	30.864	ENSPREG00000012803	rhebl1	85	31.646
ENSPREG00000005923	rab18a	66	36.145	ENSPREG00000006970	rab9b	75	36.145
ENSPREG00000005923	rab18a	70	44.186	ENSPREG00000009605	rab11a	80	44.186
ENSPREG00000005923	rab18a	78	30.769	ENSPREG00000009813	rab34b	75	30.769
ENSPREG00000005923	rab18a	80	39.713	ENSPREG00000017324	rab11al	85	42.391
ENSPREG00000005923	rab18a	78	31.282	ENSPREG00000008951	rab34a	62	34.641
ENSPREG00000005923	rab18a	68	43.195	ENSPREG00000019783	RAB15	80	42.941
ENSPREG00000005923	rab18a	66	47.561	ENSPREG00000017487	rab12	67	47.561
ENSPREG00000005923	rab18a	67	32.927	ENSPREG00000018287	KRAS	93	32.000
ENSPREG00000005923	rab18a	75	35.294	ENSPREG00000014761	rabl2	89	35.294
ENSPREG00000005923	rab18a	66	47.879	ENSPREG00000017344	-	76	47.879
ENSPREG00000005923	rab18a	67	36.471	ENSPREG00000020276	RAB29	82	36.471
ENSPREG00000005923	rab18a	66	37.952	ENSPREG00000001832	rab9a	82	37.952
ENSPREG00000005923	rab18a	67	41.212	ENSPREG00000010920	rab22a	85	41.212
ENSPREG00000005923	rab18a	68	35.882	ENSPREG00000016102	si:ch73-116o1.2	81	35.882
ENSPREG00000005923	rab18a	62	39.103	ENSPREG00000022241	si:dkey-13a21.4	76	39.103
ENSPREG00000005923	rab18a	66	41.212	ENSPREG00000013962	rab42a	76	41.212
ENSPREG00000005923	rab18a	70	44.767	ENSPREG00000006357	rab11ba	61	44.767
ENSPREG00000005923	rab18a	65	45.062	ENSPREG00000017337	rab25b	77	45.062
ENSPREG00000005923	rab18a	67	40.237	ENSPREG00000000880	rab33ba	72	40.237
ENSPREG00000005923	rab18a	66	37.725	ENSPREG00000012148	RAB7A	81	37.725
ENSPREG00000005923	rab18a	66	39.286	ENSPREG00000017750	RAB7A	81	39.286
ENSPREG00000005923	rab18a	67	43.636	ENSPREG00000006119	rab25a	79	43.636
ENSPREG00000005923	rab18a	74	44.022	ENSPREG00000010154	rab4a	86	44.022
ENSPREG00000005923	rab18a	70	38.728	ENSPREG00000007129	RAB39B	81	38.728
ENSPREG00000005923	rab18a	65	39.535	ENSPREG00000001864	-	71	39.535
ENSPREG00000005923	rab18a	70	44.767	ENSPREG00000006336	-	78	44.767
ENSPREG00000005923	rab18a	66	46.341	ENSPREG00000005323	si:dkey-16l2.16	78	46.341
ENSPREG00000005923	rab18a	78	44.928	ENSPREG00000014888	rab2a	78	51.205
ENSPREG00000005923	rab18a	70	44.767	ENSPREG00000014269	rab11bb	78	44.767
ENSPREG00000005923	rab18a	67	32.530	ENSPREG00000019341	hrasb	87	32.530
ENSPREG00000005923	rab18a	69	39.766	ENSPREG00000009535	RAB41	79	39.766
ENSPREG00000005923	rab18a	72	39.106	ENSPREG00000021505	rab6a	84	39.106
ENSPREG00000005923	rab18a	80	41.709	ENSPREG00000022167	-	86	44.706
ENSPREG00000005923	rab18a	68	44.643	ENSPREG00000010284	rab15	77	44.643
ENSPREG00000005923	rab18a	70	49.711	ENSPREG00000004889	-	82	49.711
ENSPREG00000005923	rab18a	61	35.333	ENSPREG00000006363	rras	82	35.802
ENSPREG00000005923	rab18a	64	32.716	ENSPREG00000010752	rheb	86	32.278
ENSPREG00000005923	rab18a	67	45.614	ENSPREG00000017567	rab13	90	43.784
ENSPREG00000005923	rab18a	67	37.647	ENSPREG00000012522	-	85	37.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005923	rab18a	83	95.098	ENSAPOG00000010760	rab18a	94	96.335	Acanthochromis_polyacanthus
ENSPREG00000005923	rab18a	83	84.314	ENSACIG00000009617	rab18a	93	84.817	Amphilophus_citrinellus
ENSPREG00000005923	rab18a	83	95.588	ENSAOCG00000016233	rab18a	94	96.859	Amphiprion_ocellaris
ENSPREG00000005923	rab18a	83	95.588	ENSAPEG00000005392	rab18a	94	96.859	Amphiprion_percula
ENSPREG00000005923	rab18a	83	93.627	ENSATEG00000021911	rab18a	94	94.764	Anabas_testudineus
ENSPREG00000005923	rab18a	83	87.317	ENSACAG00000005463	-	94	88.542	Anolis_carolinensis
ENSPREG00000005923	rab18a	83	95.098	ENSACLG00000011484	rab18a	100	95.098	Astatotilapia_calliptera
ENSPREG00000005923	rab18a	83	86.893	ENSCPBG00000015839	-	93	87.958	Chrysemys_picta_bellii
ENSPREG00000005923	rab18a	80	69.154	ENSCPBG00000027619	-	94	70.899	Chrysemys_picta_bellii
ENSPREG00000005923	rab18a	80	74.874	ENSCING00000006838	-	90	79.444	Ciona_intestinalis
ENSPREG00000005923	rab18a	80	73.869	ENSCSAVG00000010348	-	94	76.064	Ciona_savignyi
ENSPREG00000005923	rab18a	83	93.627	ENSCSEG00000011816	rab18a	94	95.288	Cynoglossus_semilaevis
ENSPREG00000005923	rab18a	83	97.549	ENSCVAG00000015451	rab18a	100	97.549	Cyprinodon_variegatus
ENSPREG00000005923	rab18a	83	81.463	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSPREG00000005923	rab18a	83	89.756	ENSELUG00000003805	rab18a	93	91.623	Esox_lucius
ENSPREG00000005923	rab18a	83	97.549	ENSFHEG00000019455	rab18a	100	97.549	Fundulus_heteroclitus
ENSPREG00000005923	rab18a	83	99.020	ENSGAFG00000002790	rab18a	100	99.020	Gambusia_affinis
ENSPREG00000005923	rab18a	83	86.893	ENSGAGG00000015642	-	93	87.958	Gopherus_agassizii
ENSPREG00000005923	rab18a	83	95.098	ENSHBUG00000001518	rab18a	100	95.098	Haplochromis_burtoni
ENSPREG00000005923	rab18a	83	95.074	ENSLBEG00000005861	rab18a	90	95.812	Labrus_bergylta
ENSPREG00000005923	rab18a	77	88.421	ENSLACG00000009310	rab18a	92	88.421	Latimeria_chalumnae
ENSPREG00000005923	rab18a	83	88.780	ENSLOCG00000007491	rab18a	93	90.052	Lepisosteus_oculatus
ENSPREG00000005923	rab18a	83	92.157	ENSMAMG00000014320	rab18a	94	93.717	Mastacembelus_armatus
ENSPREG00000005923	rab18a	83	94.608	ENSMZEG00005017235	rab18a	94	96.335	Maylandia_zebra
ENSPREG00000005923	rab18a	83	94.118	ENSMALG00000009813	rab18a	94	95.288	Monopterus_albus
ENSPREG00000005923	rab18a	83	95.098	ENSNBRG00000013507	rab18a	100	95.098	Neolamprologus_brichardi
ENSPREG00000005923	rab18a	78	96.354	ENSORLG00000004624	rab18a	94	96.335	Oryzias_latipes
ENSPREG00000005923	rab18a	78	96.875	ENSORLG00020008333	rab18a	94	96.859	Oryzias_latipes_hni
ENSPREG00000005923	rab18a	78	95.833	ENSORLG00015004739	rab18a	94	95.812	Oryzias_latipes_hsok
ENSPREG00000005923	rab18a	83	95.588	ENSOMEG00000020605	rab18a	100	95.588	Oryzias_melastigma
ENSPREG00000005923	rab18a	83	88.293	ENSPKIG00000009825	rab18a	92	90.476	Paramormyrops_kingsleyae
ENSPREG00000005923	rab18a	83	93.627	ENSPMGG00000020409	-	94	94.241	Periophthalmus_magnuspinnatus
ENSPREG00000005923	rab18a	83	100.000	ENSPFOG00000007571	rab18a	100	100.000	Poecilia_formosa
ENSPREG00000005923	rab18a	83	100.000	ENSPLAG00000010104	rab18a	100	100.000	Poecilia_latipinna
ENSPREG00000005923	rab18a	83	100.000	ENSPMEG00000013085	rab18a	100	100.000	Poecilia_mexicana
ENSPREG00000005923	rab18a	83	95.098	ENSPNYG00000007064	rab18a	100	95.098	Pundamilia_nyererei
ENSPREG00000005923	rab18a	82	80.597	ENSPNAG00000011548	rab18a	95	83.684	Pygocentrus_nattereri
ENSPREG00000005923	rab18a	88	85.253	ENSSFOG00015017444	rab18a	83	87.129	Scleropages_formosus
ENSPREG00000005923	rab18a	78	92.746	ENSSMAG00000002969	rab18a	94	92.708	Scophthalmus_maximus
ENSPREG00000005923	rab18a	78	95.312	ENSSDUG00000003823	rab18a	94	95.288	Seriola_dumerili
ENSPREG00000005923	rab18a	78	95.312	ENSSLDG00000006977	rab18a	94	95.288	Seriola_lalandi_dorsalis
ENSPREG00000005923	rab18a	77	88.889	ENSSPUG00000017677	-	92	88.889	Sphenodon_punctatus
ENSPREG00000005923	rab18a	83	91.176	ENSTRUG00000004984	rab18a	94	92.147	Takifugu_rubripes
ENSPREG00000005923	rab18a	83	88.350	ENSUMAG00000015574	-	91	89.894	Ursus_maritimus
ENSPREG00000005923	rab18a	83	86.893	ENSXETG00000004556	rab18	93	89.529	Xenopus_tropicalis
ENSPREG00000005923	rab18a	83	99.510	ENSXMAG00000024122	rab18a	100	99.510	Xiphophorus_maculatus