EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000005955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 8386 bases
Position: chrLG22:3689127-3697512
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008696	La	PF05383.17	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008801	-	936	-	ENSPREP00000008696	311 (aa)	-	-

Gene Model

Click here to download ENSPREG00000005955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000005955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000005955	-	93	53.535	ENSG00000138709	LARP1B	80	55.594	Homo_sapiens
ENSPREG00000005955	-	87	56.679	ENSAMEG00000002748	LARP1B	78	57.040	Ailuropoda_melanoleuca
ENSPREG00000005955	-	88	53.659	ENSANAG00000034618	LARP1B	85	53.659	Aotus_nancymaae
ENSPREG00000005955	-	89	54.930	ENSBTAG00000012135	LARP1B	51	54.225	Bos_taurus
ENSPREG00000005955	-	89	55.245	ENSCJAG00000003338	LARP1B	80	55.594	Callithrix_jacchus
ENSPREG00000005955	-	89	55.986	ENSCAFG00020018899	LARP1B	71	66.184	Canis_lupus_dingo
ENSPREG00000005955	-	89	54.965	ENSCHIG00000023144	LARP1B	78	59.912	Capra_hircus
ENSPREG00000005955	-	93	53.401	ENSTSYG00000002037	-	82	57.551	Carlito_syrichta
ENSPREG00000005955	-	95	52.288	ENSCCAG00000021948	LARP1B	84	53.420	Cebus_capucinus
ENSPREG00000005955	-	89	52.448	ENSCATG00000013541	LARP1B	79	52.797	Cercocebus_atys
ENSPREG00000005955	-	89	53.684	ENSCLAG00000006448	-	73	62.441	Chinchilla_lanigera
ENSPREG00000005955	-	72	58.051	ENSCANG00000026958	LARP1B	53	67.308	Colobus_angolensis_palliatus
ENSPREG00000005955	-	89	55.986	ENSCGRG00001004660	-	79	60.965	Cricetulus_griseus_chok1gshd
ENSPREG00000005955	-	89	55.986	ENSCGRG00000001914	-	79	60.965	Cricetulus_griseus_crigri
ENSPREG00000005955	-	89	54.577	ENSDNOG00000018765	-	52	53.873	Dasypus_novemcinctus
ENSPREG00000005955	-	96	53.770	ENSEASG00005018106	LARP1B	77	62.222	Equus_asinus_asinus
ENSPREG00000005955	-	89	56.338	ENSFCAG00000014650	-	80	56.690	Felis_catus
ENSPREG00000005955	-	97	51.420	ENSGGOG00000015900	LARP1B	84	51.735	Gorilla_gorilla
ENSPREG00000005955	-	80	50.193	ENSHGLG00000013922	-	88	47.203	Heterocephalus_glaber_female
ENSPREG00000005955	-	89	53.819	ENSHGLG00000006728	-	80	58.228	Heterocephalus_glaber_female
ENSPREG00000005955	-	80	50.193	ENSHGLG00100016491	-	88	47.203	Heterocephalus_glaber_male
ENSPREG00000005955	-	97	52.273	ENSHGLG00100014041	-	80	56.800	Heterocephalus_glaber_male
ENSPREG00000005955	-	90	41.438	ENSSTOG00000034510	-	77	42.808	Ictidomys_tridecemlineatus
ENSPREG00000005955	-	60	56.853	ENSSTOG00000033183	-	78	58.152	Ictidomys_tridecemlineatus
ENSPREG00000005955	-	88	50.360	ENSSTOG00000021917	-	77	45.105	Ictidomys_tridecemlineatus
ENSPREG00000005955	-	89	53.169	ENSSTOG00000008596	-	78	57.080	Ictidomys_tridecemlineatus
ENSPREG00000005955	-	89	53.357	ENSJJAG00000022360	Larp1b	80	53.710	Jaculus_jaculus
ENSPREG00000005955	-	83	55.682	ENSLACG00000015247	LARP1B	65	56.489	Latimeria_chalumnae
ENSPREG00000005955	-	89	56.184	ENSLAFG00000008473	-	80	56.537	Loxodonta_africana
ENSPREG00000005955	-	60	55.319	ENSMFAG00000003306	-	61	61.006	Macaca_fascicularis
ENSPREG00000005955	-	97	51.735	ENSMFAG00000002218	LARP1B	84	52.050	Macaca_fascicularis
ENSPREG00000005955	-	89	55.245	ENSMMUG00000021347	LARP1B	80	55.594	Macaca_mulatta
ENSPREG00000005955	-	50	62.420	ENSMNEG00000027747	-	61	62.420	Macaca_nemestrina
ENSPREG00000005955	-	91	79.152	ENSMZEG00005002545	larp1b	57	79.152	Maylandia_zebra
ENSPREG00000005955	-	89	55.282	ENSMAUG00000007879	-	79	60.088	Mesocricetus_auratus
ENSPREG00000005955	-	95	53.947	ENSMICG00000036111	LARP1B	83	54.276	Microcebus_murinus
ENSPREG00000005955	-	98	45.223	ENSMICG00000037883	-	77	51.373	Microcebus_murinus
ENSPREG00000005955	-	89	54.386	ENSMOCG00000001490	Larp1b	92	57.249	Microtus_ochrogaster
ENSPREG00000005955	-	89	55.634	MGP_CAROLIEiJ_G0024962	Larp1b	79	59.649	Mus_caroli
ENSPREG00000005955	-	89	55.986	ENSMUSG00000025762	Larp1b	79	60.088	Mus_musculus
ENSPREG00000005955	-	89	55.634	MGP_PahariEiJ_G0026403	Larp1b	79	60.965	Mus_pahari
ENSPREG00000005955	-	95	50.779	MGP_SPRETEiJ_G0025897	Larp1b	79	60.088	Mus_spretus
ENSPREG00000005955	-	89	54.545	ENSNLEG00000013819	LARP1B	80	54.895	Nomascus_leucogenys
ENSPREG00000005955	-	89	53.873	ENSODEG00000001292	-	80	54.225	Octodon_degus
ENSPREG00000005955	-	93	53.199	ENSPPAG00000030439	LARP1B	80	55.245	Pan_paniscus
ENSPREG00000005955	-	89	56.338	ENSPPRG00000002743	-	80	56.690	Panthera_pardus
ENSPREG00000005955	-	89	55.986	ENSPTIG00000011225	LARP1B	80	56.338	Panthera_tigris_altaica
ENSPREG00000005955	-	93	53.535	ENSPTRG00000016437	LARP1B	80	55.594	Pan_troglodytes
ENSPREG00000005955	-	97	51.735	ENSPANG00000012488	LARP1B	84	52.050	Papio_anubis
ENSPREG00000005955	-	93	54.576	ENSPCIG00000026516	LARP1B	74	56.574	Phascolarctos_cinereus
ENSPREG00000005955	-	95	53.465	ENSPCOG00000021874	LARP1B	83	52.805	Propithecus_coquereli
ENSPREG00000005955	-	89	56.338	ENSRNOG00000038366	Larp1b	79	56.738	Rattus_norvegicus
ENSPREG00000005955	-	82	52.852	ENSRBIG00000038568	-	69	52.852	Rhinopithecus_bieti
ENSPREG00000005955	-	89	54.225	ENSRBIG00000039982	-	82	54.577	Rhinopithecus_bieti
ENSPREG00000005955	-	77	52.381	ENSRROG00000038525	-	57	56.593	Rhinopithecus_roxellana
ENSPREG00000005955	-	93	53.535	ENSRROG00000030771	LARP1B	80	55.594	Rhinopithecus_roxellana
ENSPREG00000005955	-	89	54.930	ENSSSCG00000034280	LARP1B	51	54.225	Sus_scrofa
ENSPREG00000005955	-	98	47.742	ENSUAMG00000016938	-	83	47.419	Ursus_americanus
ENSPREG00000005955	-	89	55.634	ENSVVUG00000011307	LARP1B	53	54.930	Vulpes_vulpes