EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006035 (Gene tree)
Gene ID: 103471896
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9288 bases
Position: chrLG10:27627267-27636554
Accession: 103471896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008871	MIF4G_like	PF09088.11	5.7e-38	1	1
ENSPREP00000008871	MIF4G_like_2	PF09090.11	2e-87	1	1
ENSPREP00000008871	MIF4G	PF02854.19	4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008977	NCBP1-201	2394	XM_008421165	ENSPREP00000008871	797 (aa)	XP_008419387	-

Gene Model

Click here to download ENSPREG00000006035's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG
pret03015	mRNA surveillance pathway	KEGG
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006035's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006035	NCBP1	99	82.035	ENSG00000136937	NCBP1	99	82.412	Homo_sapiens
ENSPREG00000006035	NCBP1	100	95.985	ENSAPOG00000008002	NCBP1	100	95.985	Acanthochromis_polyacanthus
ENSPREG00000006035	NCBP1	99	82.206	ENSAMEG00000004763	NCBP1	99	82.581	Ailuropoda_melanoleuca
ENSPREG00000006035	NCBP1	100	95.609	ENSACIG00000000274	NCBP1	100	95.609	Amphilophus_citrinellus
ENSPREG00000006035	NCBP1	100	95.609	ENSAOCG00000021148	NCBP1	100	95.609	Amphiprion_ocellaris
ENSPREG00000006035	NCBP1	100	95.609	ENSAPEG00000001701	NCBP1	100	95.609	Amphiprion_percula
ENSPREG00000006035	NCBP1	100	95.859	ENSATEG00000006929	NCBP1	100	95.859	Anabas_testudineus
ENSPREG00000006035	NCBP1	95	82.415	ENSAPLG00000016318	NCBP1	99	83.071	Anas_platyrhynchos
ENSPREG00000006035	NCBP1	99	82.750	ENSACAG00000004409	NCBP1	87	82.750	Anolis_carolinensis
ENSPREG00000006035	NCBP1	99	80.025	ENSANAG00000025744	NCBP1	99	81.981	Aotus_nancymaae
ENSPREG00000006035	NCBP1	100	95.107	ENSACLG00000014812	NCBP1	100	95.107	Astatotilapia_calliptera
ENSPREG00000006035	NCBP1	100	90.966	ENSAMXG00000016364	NCBP1	100	90.966	Astyanax_mexicanus
ENSPREG00000006035	NCBP1	99	82.161	ENSBTAG00000009732	NCBP1	99	87.009	Bos_taurus
ENSPREG00000006035	NCBP1	100	35.985	WBGene00018156	ncbp-1	100	36.039	Caenorhabditis_elegans
ENSPREG00000006035	NCBP1	99	82.161	ENSCJAG00000010840	NCBP1	99	85.714	Callithrix_jacchus
ENSPREG00000006035	NCBP1	99	82.286	ENSCAFG00000002445	NCBP1	99	82.663	Canis_familiaris
ENSPREG00000006035	NCBP1	98	82.015	ENSCAFG00020017997	NCBP1	96	87.811	Canis_lupus_dingo
ENSPREG00000006035	NCBP1	99	82.035	ENSCHIG00000020139	NCBP1	99	82.412	Capra_hircus
ENSPREG00000006035	NCBP1	50	87.313	ENSTSYG00000011914	NCBP1	98	86.207	Carlito_syrichta
ENSPREG00000006035	NCBP1	81	75.000	ENSCAPG00000014252	NCBP1	90	74.691	Cavia_aperea
ENSPREG00000006035	NCBP1	95	81.423	ENSCPOG00000012573	NCBP1	98	81.818	Cavia_porcellus
ENSPREG00000006035	NCBP1	99	82.035	ENSCCAG00000032297	NCBP1	99	82.412	Cebus_capucinus
ENSPREG00000006035	NCBP1	99	82.035	ENSCATG00000010052	NCBP1	99	82.412	Cercocebus_atys
ENSPREG00000006035	NCBP1	99	82.035	ENSCLAG00000014339	NCBP1	99	82.412	Chinchilla_lanigera
ENSPREG00000006035	NCBP1	99	82.035	ENSCSAG00000010929	NCBP1	99	82.412	Chlorocebus_sabaeus
ENSPREG00000006035	NCBP1	89	81.132	ENSCHOG00000010332	NCBP1	91	75.630	Choloepus_hoffmanni
ENSPREG00000006035	NCBP1	99	80.905	ENSCPBG00000024344	NCBP1	99	83.219	Chrysemys_picta_bellii
ENSPREG00000006035	NCBP1	99	54.397	ENSCING00000008990	-	99	54.020	Ciona_intestinalis
ENSPREG00000006035	NCBP1	99	53.616	ENSCSAVG00000005300	-	99	53.061	Ciona_savignyi
ENSPREG00000006035	NCBP1	99	82.035	ENSCANG00000036913	NCBP1	99	82.412	Colobus_angolensis_palliatus
ENSPREG00000006035	NCBP1	99	81.784	ENSCGRG00001015771	Ncbp1	99	82.161	Cricetulus_griseus_chok1gshd
ENSPREG00000006035	NCBP1	99	81.679	ENSCGRG00000010311	Ncbp1	99	82.061	Cricetulus_griseus_crigri
ENSPREG00000006035	NCBP1	100	94.730	ENSCSEG00000012377	NCBP1	100	94.730	Cynoglossus_semilaevis
ENSPREG00000006035	NCBP1	100	96.863	ENSCVAG00000008795	NCBP1	100	96.863	Cyprinodon_variegatus
ENSPREG00000006035	NCBP1	99	81.407	ENSDNOG00000006885	NCBP1	99	81.784	Dasypus_novemcinctus
ENSPREG00000006035	NCBP1	99	78.125	ENSDORG00000013652	Ncbp1	99	78.500	Dipodomys_ordii
ENSPREG00000006035	NCBP1	99	57.447	FBgn0022942	Cbp80	99	57.447	Drosophila_melanogaster
ENSPREG00000006035	NCBP1	82	32.990	FBgn0038887	CG7907	87	32.990	Drosophila_melanogaster
ENSPREG00000006035	NCBP1	89	78.664	ENSETEG00000009705	NCBP1	89	78.448	Echinops_telfairi
ENSPREG00000006035	NCBP1	99	73.526	ENSEBUG00000008386	NCBP1	99	73.526	Eptatretus_burgeri
ENSPREG00000006035	NCBP1	99	81.784	ENSEASG00005022795	NCBP1	99	82.161	Equus_asinus_asinus
ENSPREG00000006035	NCBP1	99	81.910	ENSECAG00000013847	NCBP1	99	82.286	Equus_caballus
ENSPREG00000006035	NCBP1	95	78.261	ENSEEUG00000015973	NCBP1	99	78.524	Erinaceus_europaeus
ENSPREG00000006035	NCBP1	100	90.841	ENSELUG00000022519	NCBP1	100	90.841	Esox_lucius
ENSPREG00000006035	NCBP1	99	82.161	ENSFCAG00000001206	NCBP1	99	82.538	Felis_catus
ENSPREG00000006035	NCBP1	98	83.609	ENSFALG00000001193	NCBP1	99	83.990	Ficedula_albicollis
ENSPREG00000006035	NCBP1	99	81.784	ENSFDAG00000010864	NCBP1	99	82.161	Fukomys_damarensis
ENSPREG00000006035	NCBP1	100	97.240	ENSFHEG00000000655	NCBP1	100	97.240	Fundulus_heteroclitus
ENSPREG00000006035	NCBP1	100	91.092	ENSGMOG00000008653	NCBP1	99	91.092	Gadus_morhua
ENSPREG00000006035	NCBP1	98	83.291	ENSGALG00000002087	NCBP1	99	83.584	Gallus_gallus
ENSPREG00000006035	NCBP1	100	98.620	ENSGAFG00000017787	NCBP1	100	98.620	Gambusia_affinis
ENSPREG00000006035	NCBP1	100	93.867	ENSGACG00000016772	NCBP1	99	93.867	Gasterosteus_aculeatus
ENSPREG00000006035	NCBP1	99	83.166	ENSGAGG00000019483	NCBP1	99	83.668	Gopherus_agassizii
ENSPREG00000006035	NCBP1	99	82.035	ENSGGOG00000001376	NCBP1	99	82.412	Gorilla_gorilla
ENSPREG00000006035	NCBP1	100	95.107	ENSHBUG00000020843	NCBP1	100	95.107	Haplochromis_burtoni
ENSPREG00000006035	NCBP1	99	72.180	ENSHGLG00000018112	-	99	72.055	Heterocephalus_glaber_female
ENSPREG00000006035	NCBP1	99	82.161	ENSHGLG00000001882	NCBP1	99	82.538	Heterocephalus_glaber_female
ENSPREG00000006035	NCBP1	99	71.930	ENSHGLG00100017373	-	99	71.805	Heterocephalus_glaber_male
ENSPREG00000006035	NCBP1	99	82.161	ENSHGLG00100013014	NCBP1	99	82.538	Heterocephalus_glaber_male
ENSPREG00000006035	NCBP1	75	87.710	ENSHCOG00000000204	NCBP1	87	87.710	Hippocampus_comes
ENSPREG00000006035	NCBP1	100	89.586	ENSIPUG00000007275	ncbp1	100	89.586	Ictalurus_punctatus
ENSPREG00000006035	NCBP1	99	82.161	ENSSTOG00000002695	NCBP1	99	82.538	Ictidomys_tridecemlineatus
ENSPREG00000006035	NCBP1	100	96.361	ENSKMAG00000003594	NCBP1	100	96.361	Kryptolebias_marmoratus
ENSPREG00000006035	NCBP1	100	93.936	ENSLBEG00000011661	NCBP1	100	93.936	Labrus_bergylta
ENSPREG00000006035	NCBP1	99	77.460	ENSLACG00000013955	NCBP1	99	77.363	Latimeria_chalumnae
ENSPREG00000006035	NCBP1	99	77.267	ENSLOCG00000009579	NCBP1	99	77.640	Lepisosteus_oculatus
ENSPREG00000006035	NCBP1	99	81.910	ENSLAFG00000005999	NCBP1	99	82.286	Loxodonta_africana
ENSPREG00000006035	NCBP1	99	82.035	ENSMFAG00000030994	NCBP1	99	82.412	Macaca_fascicularis
ENSPREG00000006035	NCBP1	98	81.783	ENSMMUG00000012281	NCBP1	99	82.203	Macaca_mulatta
ENSPREG00000006035	NCBP1	99	82.035	ENSMNEG00000042790	NCBP1	99	82.412	Macaca_nemestrina
ENSPREG00000006035	NCBP1	99	82.035	ENSMLEG00000030374	NCBP1	99	82.412	Mandrillus_leucophaeus
ENSPREG00000006035	NCBP1	100	94.981	ENSMAMG00000014806	NCBP1	100	94.981	Mastacembelus_armatus
ENSPREG00000006035	NCBP1	97	92.784	ENSMZEG00005009290	-	100	92.784	Maylandia_zebra
ENSPREG00000006035	NCBP1	100	95.107	ENSMZEG00005003469	NCBP1	100	95.107	Maylandia_zebra
ENSPREG00000006035	NCBP1	99	81.187	ENSMAUG00000020583	Ncbp1	99	81.566	Mesocricetus_auratus
ENSPREG00000006035	NCBP1	99	81.533	ENSMICG00000012682	NCBP1	99	81.910	Microcebus_murinus
ENSPREG00000006035	NCBP1	99	81.658	ENSMOCG00000015818	Ncbp1	99	82.035	Microtus_ochrogaster
ENSPREG00000006035	NCBP1	91	93.361	ENSMMOG00000002610	NCBP1	100	92.531	Mola_mola
ENSPREG00000006035	NCBP1	99	81.533	ENSMODG00000003202	NCBP1	99	81.784	Monodelphis_domestica
ENSPREG00000006035	NCBP1	100	95.232	ENSMALG00000003547	NCBP1	100	95.232	Monopterus_albus
ENSPREG00000006035	NCBP1	99	82.161	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.538	Mus_caroli
ENSPREG00000006035	NCBP1	99	82.161	ENSMUSG00000028330	Ncbp1	99	82.538	Mus_musculus
ENSPREG00000006035	NCBP1	99	82.161	MGP_PahariEiJ_G0028318	Ncbp1	99	82.538	Mus_pahari
ENSPREG00000006035	NCBP1	99	82.161	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.538	Mus_spretus
ENSPREG00000006035	NCBP1	99	82.412	ENSMPUG00000006399	NCBP1	99	82.789	Mustela_putorius_furo
ENSPREG00000006035	NCBP1	98	80.892	ENSMLUG00000015201	NCBP1	99	81.274	Myotis_lucifugus
ENSPREG00000006035	NCBP1	99	82.412	ENSNGAG00000014101	Ncbp1	99	82.412	Nannospalax_galili
ENSPREG00000006035	NCBP1	76	97.797	ENSNBRG00000014674	NCBP1	97	97.797	Neolamprologus_brichardi
ENSPREG00000006035	NCBP1	99	82.035	ENSNLEG00000016909	NCBP1	99	82.412	Nomascus_leucogenys
ENSPREG00000006035	NCBP1	89	81.211	ENSMEUG00000010672	NCBP1	90	81.211	Notamacropus_eugenii
ENSPREG00000006035	NCBP1	84	74.497	ENSOPRG00000002144	-	88	75.168	Ochotona_princeps
ENSPREG00000006035	NCBP1	99	81.910	ENSODEG00000003232	NCBP1	99	82.286	Octodon_degus
ENSPREG00000006035	NCBP1	100	95.232	ENSONIG00000001502	NCBP1	100	95.232	Oreochromis_niloticus
ENSPREG00000006035	NCBP1	78	85.393	ENSOANG00000001918	NCBP1	100	85.393	Ornithorhynchus_anatinus
ENSPREG00000006035	NCBP1	98	81.586	ENSOCUG00000013853	NCBP1	97	82.097	Oryctolagus_cuniculus
ENSPREG00000006035	NCBP1	100	94.750	ENSORLG00000011008	NCBP1	100	94.750	Oryzias_latipes
ENSPREG00000006035	NCBP1	100	95.000	ENSORLG00020017455	NCBP1	100	95.000	Oryzias_latipes_hni
ENSPREG00000006035	NCBP1	100	94.875	ENSORLG00015012127	NCBP1	100	94.875	Oryzias_latipes_hsok
ENSPREG00000006035	NCBP1	100	95.500	ENSOMEG00000020698	NCBP1	100	95.500	Oryzias_melastigma
ENSPREG00000006035	NCBP1	99	81.955	ENSOGAG00000013888	NCBP1	99	82.331	Otolemur_garnettii
ENSPREG00000006035	NCBP1	99	82.035	ENSOARG00000011233	NCBP1	99	82.412	Ovis_aries
ENSPREG00000006035	NCBP1	99	82.035	ENSPPAG00000026462	NCBP1	99	82.412	Pan_paniscus
ENSPREG00000006035	NCBP1	99	82.286	ENSPPRG00000022574	NCBP1	99	82.663	Panthera_pardus
ENSPREG00000006035	NCBP1	99	82.286	ENSPTIG00000018507	NCBP1	99	82.663	Panthera_tigris_altaica
ENSPREG00000006035	NCBP1	99	82.035	ENSPTRG00000021167	NCBP1	99	82.412	Pan_troglodytes
ENSPREG00000006035	NCBP1	99	82.035	ENSPANG00000025591	NCBP1	99	82.412	Papio_anubis
ENSPREG00000006035	NCBP1	99	87.563	ENSPKIG00000015861	NCBP1	99	87.437	Paramormyrops_kingsleyae
ENSPREG00000006035	NCBP1	64	81.676	ENSPSIG00000009558	NCBP1	99	82.261	Pelodiscus_sinensis
ENSPREG00000006035	NCBP1	100	90.375	ENSPMGG00000020476	NCBP1	100	90.375	Periophthalmus_magnuspinnatus
ENSPREG00000006035	NCBP1	99	81.407	ENSPEMG00000020105	Ncbp1	99	81.910	Peromyscus_maniculatus_bairdii
ENSPREG00000006035	NCBP1	99	67.995	ENSPMAG00000005533	NCBP1	99	67.746	Petromyzon_marinus
ENSPREG00000006035	NCBP1	99	81.533	ENSPCIG00000015800	NCBP1	99	84.141	Phascolarctos_cinereus
ENSPREG00000006035	NCBP1	100	98.498	ENSPFOG00000004158	NCBP1	100	98.498	Poecilia_formosa
ENSPREG00000006035	NCBP1	100	98.871	ENSPLAG00000020002	NCBP1	100	98.871	Poecilia_latipinna
ENSPREG00000006035	NCBP1	100	98.620	ENSPMEG00000019821	NCBP1	100	98.620	Poecilia_mexicana
ENSPREG00000006035	NCBP1	99	82.035	ENSPPYG00000019426	NCBP1	99	82.412	Pongo_abelii
ENSPREG00000006035	NCBP1	90	79.758	ENSPCAG00000009943	NCBP1	90	79.758	Procavia_capensis
ENSPREG00000006035	NCBP1	82	86.842	ENSPCOG00000020024	NCBP1	98	86.842	Propithecus_coquereli
ENSPREG00000006035	NCBP1	99	81.910	ENSPVAG00000005924	NCBP1	99	82.286	Pteropus_vampyrus
ENSPREG00000006035	NCBP1	91	93.906	ENSPNYG00000002140	NCBP1	99	93.906	Pundamilia_nyererei
ENSPREG00000006035	NCBP1	100	90.226	ENSPNAG00000027753	NCBP1	100	90.226	Pygocentrus_nattereri
ENSPREG00000006035	NCBP1	99	82.035	ENSRNOG00000023605	Ncbp1	99	82.538	Rattus_norvegicus
ENSPREG00000006035	NCBP1	99	82.035	ENSRBIG00000043175	NCBP1	99	82.412	Rhinopithecus_bieti
ENSPREG00000006035	NCBP1	99	82.035	ENSRROG00000029767	NCBP1	99	82.412	Rhinopithecus_roxellana
ENSPREG00000006035	NCBP1	99	82.035	ENSSBOG00000019378	NCBP1	98	86.829	Saimiri_boliviensis_boliviensis
ENSPREG00000006035	NCBP1	70	77.273	ENSSHAG00000015882	NCBP1	73	78.030	Sarcophilus_harrisii
ENSPREG00000006035	NCBP1	98	85.987	ENSSFOG00015001872	NCBP1	99	85.302	Scleropages_formosus
ENSPREG00000006035	NCBP1	100	93.476	ENSSMAG00000007463	NCBP1	100	93.476	Scophthalmus_maximus
ENSPREG00000006035	NCBP1	100	94.605	ENSSDUG00000007019	NCBP1	100	95.349	Seriola_dumerili
ENSPREG00000006035	NCBP1	100	95.609	ENSSLDG00000021924	NCBP1	100	95.609	Seriola_lalandi_dorsalis
ENSPREG00000006035	NCBP1	85	70.905	ENSSARG00000007274	NCBP1	86	71.767	Sorex_araneus
ENSPREG00000006035	NCBP1	99	77.261	ENSSPUG00000008609	NCBP1	99	77.387	Sphenodon_punctatus
ENSPREG00000006035	NCBP1	100	96.863	ENSSPAG00000012550	NCBP1	100	96.863	Stegastes_partitus
ENSPREG00000006035	NCBP1	99	82.035	ENSSSCG00000005366	NCBP1	99	82.412	Sus_scrofa
ENSPREG00000006035	NCBP1	99	78.643	ENSTGUG00000001472	NCBP1	99	79.271	Taeniopygia_guttata
ENSPREG00000006035	NCBP1	100	93.852	ENSTRUG00000005287	NCBP1	100	93.852	Takifugu_rubripes
ENSPREG00000006035	NCBP1	99	79.648	ENSTBEG00000004035	NCBP1	99	80.025	Tupaia_belangeri
ENSPREG00000006035	NCBP1	88	84.236	ENSTTRG00000000507	NCBP1	88	84.236	Tursiops_truncatus
ENSPREG00000006035	NCBP1	99	82.161	ENSUAMG00000005471	NCBP1	99	82.538	Ursus_americanus
ENSPREG00000006035	NCBP1	97	79.871	ENSUMAG00000011865	NCBP1	99	82.003	Ursus_maritimus
ENSPREG00000006035	NCBP1	99	78.643	ENSVPAG00000010537	NCBP1	99	79.020	Vicugna_pacos
ENSPREG00000006035	NCBP1	99	82.286	ENSVVUG00000019725	NCBP1	99	82.663	Vulpes_vulpes
ENSPREG00000006035	NCBP1	99	78.518	ENSXETG00000010179	ncbp1	99	78.392	Xenopus_tropicalis
ENSPREG00000006035	NCBP1	100	98.243	ENSXMAG00000018253	NCBP1	100	98.243	Xiphophorus_maculatus