EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006048 (Gene tree)
Gene ID: 103463483
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4517 bases
Position: chrLG4:5897239-5901755
Accession: 103463483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008860	MMR_HSR1	PF01926.23	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000008966	-	1842	XM_008406859	ENSPREP00000008860	613 (aa)	XP_008405081	-

Gene Model

Click here to download ENSPREG00000006048's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006048	lsg1	99	55.457	ENSG00000041802	LSG1	89	79.747	Homo_sapiens
ENSPREG00000006048	lsg1	100	67.385	ENSAPOG00000009694	lsg1	98	68.139	Acanthochromis_polyacanthus
ENSPREG00000006048	lsg1	99	53.461	ENSAMEG00000009343	LSG1	97	54.394	Ailuropoda_melanoleuca
ENSPREG00000006048	lsg1	98	69.401	ENSACIG00000012406	lsg1	97	69.255	Amphilophus_citrinellus
ENSPREG00000006048	lsg1	100	67.846	ENSAOCG00000016066	lsg1	98	67.823	Amphiprion_ocellaris
ENSPREG00000006048	lsg1	100	67.692	ENSAPEG00000003252	lsg1	98	67.874	Amphiprion_percula
ENSPREG00000006048	lsg1	98	71.791	ENSATEG00000011794	lsg1	97	71.497	Anabas_testudineus
ENSPREG00000006048	lsg1	94	51.501	ENSACAG00000004222	LSG1	99	52.291	Anolis_carolinensis
ENSPREG00000006048	lsg1	99	55.917	ENSANAG00000021153	LSG1	97	55.640	Aotus_nancymaae
ENSPREG00000006048	lsg1	100	69.848	ENSACLG00000000520	lsg1	98	70.186	Astatotilapia_calliptera
ENSPREG00000006048	lsg1	99	63.150	ENSAMXG00000008271	lsg1	98	62.597	Astyanax_mexicanus
ENSPREG00000006048	lsg1	99	56.456	ENSBTAG00000008461	LSG1	97	56.221	Bos_taurus
ENSPREG00000006048	lsg1	74	44.106	WBGene00016907	C53H9.2	72	49.065	Caenorhabditis_elegans
ENSPREG00000006048	lsg1	99	56.287	ENSCJAG00000013962	LSG1	97	56.135	Callithrix_jacchus
ENSPREG00000006048	lsg1	94	55.172	ENSCAFG00000013445	LSG1	99	54.334	Canis_familiaris
ENSPREG00000006048	lsg1	99	54.260	ENSCAFG00020002216	LSG1	99	53.521	Canis_lupus_dingo
ENSPREG00000006048	lsg1	99	54.315	ENSCHIG00000015769	LSG1	97	55.470	Capra_hircus
ENSPREG00000006048	lsg1	99	55.000	ENSTSYG00000001447	LSG1	97	54.751	Carlito_syrichta
ENSPREG00000006048	lsg1	94	55.395	ENSCAPG00000009856	LSG1	99	55.806	Cavia_aperea
ENSPREG00000006048	lsg1	99	55.922	ENSCCAG00000035744	LSG1	97	56.260	Cebus_capucinus
ENSPREG00000006048	lsg1	99	56.721	ENSCATG00000042060	LSG1	97	54.795	Cercocebus_atys
ENSPREG00000006048	lsg1	99	56.130	ENSCSAG00000008796	LSG1	89	55.188	Chlorocebus_sabaeus
ENSPREG00000006048	lsg1	100	57.249	ENSCPBG00000015941	LSG1	81	56.753	Chrysemys_picta_bellii
ENSPREG00000006048	lsg1	81	53.815	ENSCING00000007079	-	92	54.077	Ciona_intestinalis
ENSPREG00000006048	lsg1	78	52.273	ENSCSAVG00000002514	-	96	52.419	Ciona_savignyi
ENSPREG00000006048	lsg1	99	55.687	ENSCANG00000030709	LSG1	97	55.436	Colobus_angolensis_palliatus
ENSPREG00000006048	lsg1	99	57.165	ENSCGRG00001019846	Lsg1	97	57.504	Cricetulus_griseus_chok1gshd
ENSPREG00000006048	lsg1	99	55.838	ENSCGRG00000014617	Lsg1	97	56.442	Cricetulus_griseus_crigri
ENSPREG00000006048	lsg1	98	66.258	ENSCSEG00000008522	lsg1	97	65.948	Cynoglossus_semilaevis
ENSPREG00000006048	lsg1	97	74.485	ENSCVAG00000002484	lsg1	97	74.802	Cyprinodon_variegatus
ENSPREG00000006048	lsg1	100	63.650	ENSDARG00000015352	lsg1	97	63.407	Danio_rerio
ENSPREG00000006048	lsg1	99	54.519	ENSDNOG00000006224	LSG1	97	54.421	Dasypus_novemcinctus
ENSPREG00000006048	lsg1	99	41.577	FBgn0266284	Ns3	95	41.396	Drosophila_melanogaster
ENSPREG00000006048	lsg1	87	74.667	ENSETEG00000003888	LSG1	87	77.966	Echinops_telfairi
ENSPREG00000006048	lsg1	88	47.395	ENSEBUG00000003119	lsg1	85	46.555	Eptatretus_burgeri
ENSPREG00000006048	lsg1	99	55.589	ENSEASG00005000678	LSG1	97	55.267	Equus_asinus_asinus
ENSPREG00000006048	lsg1	99	55.178	ENSECAG00000017659	LSG1	97	55.167	Equus_caballus
ENSPREG00000006048	lsg1	89	60.345	ENSEEUG00000015217	LSG1	74	60.345	Erinaceus_europaeus
ENSPREG00000006048	lsg1	100	63.166	ENSELUG00000023973	lsg1	98	62.402	Esox_lucius
ENSPREG00000006048	lsg1	99	54.955	ENSFCAG00000024957	LSG1	97	55.231	Felis_catus
ENSPREG00000006048	lsg1	92	53.035	ENSFALG00000007210	LSG1	94	53.035	Ficedula_albicollis
ENSPREG00000006048	lsg1	99	55.251	ENSFDAG00000017373	LSG1	97	55.988	Fukomys_damarensis
ENSPREG00000006048	lsg1	97	77.143	ENSFHEG00000003680	lsg1	97	76.984	Fundulus_heteroclitus
ENSPREG00000006048	lsg1	98	58.464	ENSGMOG00000015834	lsg1	97	59.084	Gadus_morhua
ENSPREG00000006048	lsg1	99	51.627	ENSGALG00000007058	LSG1	86	51.908	Gallus_gallus
ENSPREG00000006048	lsg1	97	82.137	ENSGAFG00000015831	lsg1	97	81.818	Gambusia_affinis
ENSPREG00000006048	lsg1	98	68.239	ENSGACG00000009323	lsg1	97	68.246	Gasterosteus_aculeatus
ENSPREG00000006048	lsg1	99	56.361	ENSGGOG00000000520	LSG1	97	55.251	Gorilla_gorilla
ENSPREG00000006048	lsg1	100	70.859	ENSHBUG00000005659	lsg1	98	71.226	Haplochromis_burtoni
ENSPREG00000006048	lsg1	99	54.338	ENSHGLG00000017390	LSG1	97	54.250	Heterocephalus_glaber_female
ENSPREG00000006048	lsg1	99	54.338	ENSHGLG00100018587	LSG1	97	54.250	Heterocephalus_glaber_male
ENSPREG00000006048	lsg1	97	69.510	ENSHCOG00000016848	lsg1	97	69.510	Hippocampus_comes
ENSPREG00000006048	lsg1	100	63.441	ENSIPUG00000008631	lsg1	97	63.465	Ictalurus_punctatus
ENSPREG00000006048	lsg1	74	47.348	ENSSTOG00000010234	LSG1	92	48.317	Ictidomys_tridecemlineatus
ENSPREG00000006048	lsg1	99	55.793	ENSJJAG00000015513	Lsg1	97	55.469	Jaculus_jaculus
ENSPREG00000006048	lsg1	98	67.717	ENSKMAG00000009681	lsg1	97	67.563	Kryptolebias_marmoratus
ENSPREG00000006048	lsg1	98	66.086	ENSLBEG00000024261	lsg1	97	66.083	Labrus_bergylta
ENSPREG00000006048	lsg1	100	57.080	ENSLACG00000013399	LSG1	98	56.449	Latimeria_chalumnae
ENSPREG00000006048	lsg1	98	60.752	ENSLOCG00000004918	lsg1	97	61.325	Lepisosteus_oculatus
ENSPREG00000006048	lsg1	99	56.024	ENSLAFG00000012919	-	97	56.000	Loxodonta_africana
ENSPREG00000006048	lsg1	99	56.278	ENSMFAG00000039903	LSG1	97	54.338	Macaca_fascicularis
ENSPREG00000006048	lsg1	99	56.278	ENSMMUG00000010708	LSG1	97	55.708	Macaca_mulatta
ENSPREG00000006048	lsg1	99	56.278	ENSMNEG00000031538	LSG1	97	54.338	Macaca_nemestrina
ENSPREG00000006048	lsg1	99	56.278	ENSMLEG00000041184	LSG1	97	55.708	Mandrillus_leucophaeus
ENSPREG00000006048	lsg1	100	66.667	ENSMAMG00000000470	lsg1	98	65.927	Mastacembelus_armatus
ENSPREG00000006048	lsg1	100	70.706	ENSMZEG00005017865	lsg1	98	71.069	Maylandia_zebra
ENSPREG00000006048	lsg1	88	52.159	ENSMGAG00000007050	LSG1	99	52.254	Meleagris_gallopavo
ENSPREG00000006048	lsg1	90	56.250	ENSMAUG00000016976	Lsg1	90	56.446	Mesocricetus_auratus
ENSPREG00000006048	lsg1	99	54.235	ENSMICG00000049087	LSG1	97	54.033	Microcebus_murinus
ENSPREG00000006048	lsg1	99	56.146	ENSMOCG00000022136	Lsg1	97	56.299	Microtus_ochrogaster
ENSPREG00000006048	lsg1	86	88.750	ENSMMOG00000008884	lsg1	97	63.694	Mola_mola
ENSPREG00000006048	lsg1	99	52.036	ENSMODG00000019828	LSG1	97	51.628	Monodelphis_domestica
ENSPREG00000006048	lsg1	99	56.692	MGP_CAROLIEiJ_G0020648	Lsg1	97	57.054	Mus_caroli
ENSPREG00000006048	lsg1	99	57.251	ENSMUSG00000022538	Lsg1	97	57.585	Mus_musculus
ENSPREG00000006048	lsg1	98	55.878	MGP_PahariEiJ_G0016352	Lsg1	97	56.000	Mus_pahari
ENSPREG00000006048	lsg1	99	57.553	MGP_SPRETEiJ_G0021544	Lsg1	97	57.585	Mus_spretus
ENSPREG00000006048	lsg1	99	55.045	ENSMPUG00000003734	LSG1	97	54.809	Mustela_putorius_furo
ENSPREG00000006048	lsg1	99	56.647	ENSMLUG00000012548	LSG1	97	56.192	Myotis_lucifugus
ENSPREG00000006048	lsg1	99	55.505	ENSNGAG00000021872	Lsg1	97	56.006	Nannospalax_galili
ENSPREG00000006048	lsg1	99	55.621	ENSNLEG00000008293	LSG1	97	55.183	Nomascus_leucogenys
ENSPREG00000006048	lsg1	68	71.134	ENSMEUG00000009041	-	84	71.134	Notamacropus_eugenii
ENSPREG00000006048	lsg1	100	69.592	ENSONIG00000002635	lsg1	98	69.767	Oreochromis_niloticus
ENSPREG00000006048	lsg1	95	56.829	ENSOANG00000012742	LSG1	99	56.515	Ornithorhynchus_anatinus
ENSPREG00000006048	lsg1	99	55.423	ENSOCUG00000004817	LSG1	97	54.795	Oryctolagus_cuniculus
ENSPREG00000006048	lsg1	98	69.427	ENSORLG00000007695	lsg1	97	69.280	Oryzias_latipes
ENSPREG00000006048	lsg1	98	69.889	ENSORLG00020016286	lsg1	97	69.586	Oryzias_latipes_hni
ENSPREG00000006048	lsg1	98	69.586	ENSORLG00015012025	lsg1	97	69.280	Oryzias_latipes_hsok
ENSPREG00000006048	lsg1	98	66.877	ENSOMEG00000022379	lsg1	97	66.561	Oryzias_melastigma
ENSPREG00000006048	lsg1	99	54.370	ENSOGAG00000003475	LSG1	97	54.325	Otolemur_garnettii
ENSPREG00000006048	lsg1	99	53.666	ENSOARG00000020403	LSG1	97	55.215	Ovis_aries
ENSPREG00000006048	lsg1	99	56.018	ENSPPAG00000029271	LSG1	97	55.251	Pan_paniscus
ENSPREG00000006048	lsg1	99	53.687	ENSPPRG00000010281	LSG1	97	54.079	Panthera_pardus
ENSPREG00000006048	lsg1	99	54.451	ENSPTIG00000010789	LSG1	97	54.863	Panthera_tigris_altaica
ENSPREG00000006048	lsg1	99	56.166	ENSPTRG00000015760	LSG1	97	55.403	Pan_troglodytes
ENSPREG00000006048	lsg1	99	55.835	ENSPANG00000018249	LSG1	97	53.881	Papio_anubis
ENSPREG00000006048	lsg1	99	62.769	ENSPKIG00000002895	lsg1	97	63.823	Paramormyrops_kingsleyae
ENSPREG00000006048	lsg1	96	53.941	ENSPSIG00000009821	LSG1	99	53.941	Pelodiscus_sinensis
ENSPREG00000006048	lsg1	95	65.961	ENSPMGG00000000931	lsg1	100	65.961	Periophthalmus_magnuspinnatus
ENSPREG00000006048	lsg1	99	55.322	ENSPEMG00000012082	-	97	55.453	Peromyscus_maniculatus_bairdii
ENSPREG00000006048	lsg1	99	52.855	ENSPMAG00000007451	lsg1	98	52.018	Petromyzon_marinus
ENSPREG00000006048	lsg1	97	60.256	ENSPCIG00000013890	LSG1	72	60.256	Phascolarctos_cinereus
ENSPREG00000006048	lsg1	97	83.228	ENSPFOG00000021882	lsg1	97	83.070	Poecilia_formosa
ENSPREG00000006048	lsg1	97	84.689	ENSPLAG00000019536	lsg1	97	84.530	Poecilia_latipinna
ENSPREG00000006048	lsg1	97	82.622	ENSPMEG00000017281	lsg1	97	82.464	Poecilia_mexicana
ENSPREG00000006048	lsg1	92	53.698	ENSPPYG00000014425	LSG1	97	53.744	Pongo_abelii
ENSPREG00000006048	lsg1	83	72.000	ENSPCAG00000005511	LSG1	78	76.271	Procavia_capensis
ENSPREG00000006048	lsg1	99	55.438	ENSPCOG00000012360	LSG1	97	55.194	Propithecus_coquereli
ENSPREG00000006048	lsg1	100	69.848	ENSPNYG00000021994	lsg1	98	70.186	Pundamilia_nyererei
ENSPREG00000006048	lsg1	100	63.190	ENSPNAG00000015533	lsg1	98	62.893	Pygocentrus_nattereri
ENSPREG00000006048	lsg1	99	54.748	ENSRNOG00000001727	Lsg1	97	55.556	Rattus_norvegicus
ENSPREG00000006048	lsg1	99	55.556	ENSRBIG00000029053	LSG1	97	55.300	Rhinopithecus_bieti
ENSPREG00000006048	lsg1	99	55.556	ENSRROG00000037702	LSG1	97	55.300	Rhinopithecus_roxellana
ENSPREG00000006048	lsg1	81	37.017	YGL099W	LSG1	70	36.986	Saccharomyces_cerevisiae
ENSPREG00000006048	lsg1	99	55.621	ENSSBOG00000034938	LSG1	97	55.793	Saimiri_boliviensis_boliviensis
ENSPREG00000006048	lsg1	77	50.000	ENSSHAG00000003487	LSG1	100	49.623	Sarcophilus_harrisii
ENSPREG00000006048	lsg1	98	62.303	ENSSFOG00015008955	lsg1	97	62.243	Scleropages_formosus
ENSPREG00000006048	lsg1	98	69.938	ENSSDUG00000004622	lsg1	98	69.844	Seriola_dumerili
ENSPREG00000006048	lsg1	98	70.142	ENSSLDG00000010869	lsg1	97	70.000	Seriola_lalandi_dorsalis
ENSPREG00000006048	lsg1	82	51.031	ENSSARG00000012981	LSG1	79	50.562	Sorex_araneus
ENSPREG00000006048	lsg1	100	57.186	ENSSPUG00000016347	LSG1	97	56.375	Sphenodon_punctatus
ENSPREG00000006048	lsg1	100	67.907	ENSSPAG00000005508	lsg1	98	68.998	Stegastes_partitus
ENSPREG00000006048	lsg1	99	54.407	ENSSSCG00000011827	LSG1	97	55.226	Sus_scrofa
ENSPREG00000006048	lsg1	88	49.755	ENSTGUG00000009068	LSG1	100	50.328	Taeniopygia_guttata
ENSPREG00000006048	lsg1	97	68.966	ENSTRUG00000017380	lsg1	97	68.637	Takifugu_rubripes
ENSPREG00000006048	lsg1	97	65.877	ENSTNIG00000015570	lsg1	97	66.035	Tetraodon_nigroviridis
ENSPREG00000006048	lsg1	99	51.335	ENSTTRG00000000559	LSG1	97	51.064	Tursiops_truncatus
ENSPREG00000006048	lsg1	99	53.676	ENSUAMG00000012454	LSG1	97	54.809	Ursus_americanus
ENSPREG00000006048	lsg1	99	53.676	ENSUMAG00000000855	LSG1	97	54.809	Ursus_maritimus
ENSPREG00000006048	lsg1	94	51.730	ENSVPAG00000012400	LSG1	99	51.730	Vicugna_pacos
ENSPREG00000006048	lsg1	94	54.864	ENSVVUG00000008956	LSG1	97	54.173	Vulpes_vulpes
ENSPREG00000006048	lsg1	100	55.690	ENSXETG00000003451	lsg1	98	55.538	Xenopus_tropicalis
ENSPREG00000006048	lsg1	97	83.067	ENSXCOG00000003239	lsg1	97	83.706	Xiphophorus_couchianus
ENSPREG00000006048	lsg1	97	81.115	ENSXMAG00000005536	lsg1	98	80.960	Xiphophorus_maculatus