EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006149 (Gene tree)
Gene ID: 103471596
Gene Symbol: srsf7b
Alias: sfrs7|srsf7|zgc:114203
Full Name: serine and arginine rich splicing factor 7
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4942 bases
Position: chrLG1:34061986-34066927
Accession: 103471596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000008989	RRM_1	PF00076.22	9.4e-17	1	1
ENSPREP00000008977	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009086	-	711	-	ENSPREP00000008977	236 (aa)	-	-
ENSPRET00000009098	-	2308	XM_008420704	ENSPREP00000008989	219 (aa)	XP_008418926	UPI0004A29C4C

Gene Model

Click here to download ENSPREG00000006149's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG
pret05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006149	srsf7b	70	33.939	ENSPREG00000008383	srsf10b	63	31.298
ENSPREG00000006149	srsf7b	55	72.500	ENSPREG00000020685	srsf7a	87	71.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006149	srsf7b	55	89.167	ENSG00000115875	SRSF7	92	89.344	Homo_sapiens
ENSPREG00000006149	srsf7b	52	71.681	ENSACIG00000004885	srsf7a	73	69.912	Amphilophus_citrinellus
ENSPREG00000006149	srsf7b	55	88.333	ENSACIG00000009890	srsf7b	94	88.525	Amphilophus_citrinellus
ENSPREG00000006149	srsf7b	55	66.942	ENSAOCG00000021499	srsf7b	94	56.204	Amphiprion_ocellaris
ENSPREG00000006149	srsf7b	55	66.942	ENSAPEG00000018802	srsf7b	94	56.204	Amphiprion_percula
ENSPREG00000006149	srsf7b	51	88.288	ENSAPLG00000012167	-	51	88.496	Anas_platyrhynchos
ENSPREG00000006149	srsf7b	55	90.000	ENSACAG00000006082	SRSF7	52	90.164	Anolis_carolinensis
ENSPREG00000006149	srsf7b	55	89.167	ENSANAG00000019399	SRSF7	89	89.344	Aotus_nancymaae
ENSPREG00000006149	srsf7b	55	86.667	ENSAMXG00000007005	srsf7b	58	86.885	Astyanax_mexicanus
ENSPREG00000006149	srsf7b	59	53.846	ENSAMXG00000008840	srsf3b	68	50.769	Astyanax_mexicanus
ENSPREG00000006149	srsf7b	55	89.167	ENSBTAG00000014891	SRSF7	89	89.344	Bos_taurus
ENSPREG00000006149	srsf7b	55	89.167	ENSCJAG00000015185	SRSF7	89	89.344	Callithrix_jacchus
ENSPREG00000006149	srsf7b	55	89.167	ENSCAFG00000029620	SRSF7	51	89.344	Canis_familiaris
ENSPREG00000006149	srsf7b	55	89.167	ENSCAFG00020022807	SRSF7	89	89.344	Canis_lupus_dingo
ENSPREG00000006149	srsf7b	57	61.111	ENSCAFG00020013547	-	76	59.016	Canis_lupus_dingo
ENSPREG00000006149	srsf7b	55	89.167	ENSCHIG00000019180	SRSF7	89	89.344	Capra_hircus
ENSPREG00000006149	srsf7b	55	89.167	ENSTSYG00000012273	SRSF7	89	89.344	Carlito_syrichta
ENSPREG00000006149	srsf7b	55	89.167	ENSCPOG00000033318	SRSF7	89	89.344	Cavia_porcellus
ENSPREG00000006149	srsf7b	55	89.167	ENSCATG00000031728	SRSF7	89	89.344	Cercocebus_atys
ENSPREG00000006149	srsf7b	55	89.167	ENSCLAG00000005235	SRSF7	89	89.344	Chinchilla_lanigera
ENSPREG00000006149	srsf7b	55	89.167	ENSCSAG00000012296	SRSF7	51	89.344	Chlorocebus_sabaeus
ENSPREG00000006149	srsf7b	55	88.333	ENSCPBG00000018252	-	89	88.525	Chrysemys_picta_bellii
ENSPREG00000006149	srsf7b	55	90.000	ENSCPBG00000018247	-	89	90.164	Chrysemys_picta_bellii
ENSPREG00000006149	srsf7b	59	49.612	ENSCING00000011663	-	72	52.756	Ciona_intestinalis
ENSPREG00000006149	srsf7b	52	51.181	ENSCING00000023459	-	56	50.781	Ciona_intestinalis
ENSPREG00000006149	srsf7b	52	52.000	ENSCSAVG00000010868	-	57	49.206	Ciona_savignyi
ENSPREG00000006149	srsf7b	55	89.167	ENSCANG00000040757	SRSF7	89	89.344	Colobus_angolensis_palliatus
ENSPREG00000006149	srsf7b	55	89.167	ENSCGRG00001018245	Srsf7	51	89.344	Cricetulus_griseus_chok1gshd
ENSPREG00000006149	srsf7b	51	89.286	ENSCGRG00000005929	Srsf7	84	89.474	Cricetulus_griseus_crigri
ENSPREG00000006149	srsf7b	55	70.000	ENSCSEG00000006378	srsf7a	79	69.912	Cynoglossus_semilaevis
ENSPREG00000006149	srsf7b	55	87.500	ENSDARG00000101057	srsf7b	80	87.705	Danio_rerio
ENSPREG00000006149	srsf7b	81	64.607	ENSDARG00000035325	srsf7a	81	81.356	Danio_rerio
ENSPREG00000006149	srsf7b	55	89.167	ENSDNOG00000007821	SRSF7	89	89.344	Dasypus_novemcinctus
ENSPREG00000006149	srsf7b	55	89.167	ENSDORG00000008616	Srsf7	51	89.344	Dipodomys_ordii
ENSPREG00000006149	srsf7b	52	52.344	FBgn0028554	x16	50	52.344	Drosophila_melanogaster
ENSPREG00000006149	srsf7b	54	74.790	ENSEBUG00000004912	srsf7a	51	74.790	Eptatretus_burgeri
ENSPREG00000006149	srsf7b	55	89.167	ENSEASG00005005547	SRSF7	89	89.344	Equus_asinus_asinus
ENSPREG00000006149	srsf7b	55	89.167	ENSECAG00000008664	SRSF7	51	89.344	Equus_caballus
ENSPREG00000006149	srsf7b	55	89.167	ENSEEUG00000014487	SRSF7	51	89.344	Erinaceus_europaeus
ENSPREG00000006149	srsf7b	55	71.667	ENSELUG00000016922	srsf7a	78	70.000	Esox_lucius
ENSPREG00000006149	srsf7b	99	66.514	ENSELUG00000018155	srsf7b	88	85.246	Esox_lucius
ENSPREG00000006149	srsf7b	55	89.167	ENSFCAG00000031143	SRSF7	56	89.344	Felis_catus
ENSPREG00000006149	srsf7b	53	57.627	ENSFCAG00000028644	-	79	57.627	Felis_catus
ENSPREG00000006149	srsf7b	51	88.288	ENSFALG00000002364	-	82	70.526	Ficedula_albicollis
ENSPREG00000006149	srsf7b	55	89.167	ENSFDAG00000016030	-	89	89.344	Fukomys_damarensis
ENSPREG00000006149	srsf7b	54	78.151	ENSFDAG00000017258	-	53	78.689	Fukomys_damarensis
ENSPREG00000006149	srsf7b	56	99.180	ENSFHEG00000023046	srsf7b	100	84.141	Fundulus_heteroclitus
ENSPREG00000006149	srsf7b	58	69.841	ENSFHEG00000007159	srsf7a	65	68.595	Fundulus_heteroclitus
ENSPREG00000006149	srsf7b	55	86.667	ENSGALG00000033120	SRSF7	89	86.885	Gallus_gallus
ENSPREG00000006149	srsf7b	58	95.312	ENSGAFG00000008856	srsf7b	81	100.000	Gambusia_affinis
ENSPREG00000006149	srsf7b	55	88.333	ENSGAGG00000003553	SRSF7	89	88.525	Gopherus_agassizii
ENSPREG00000006149	srsf7b	55	85.000	ENSGAGG00000016294	-	89	85.246	Gopherus_agassizii
ENSPREG00000006149	srsf7b	55	89.167	ENSGGOG00000014620	SRSF7	89	89.344	Gorilla_gorilla
ENSPREG00000006149	srsf7b	55	89.167	ENSHGLG00000013954	-	51	89.344	Heterocephalus_glaber_female
ENSPREG00000006149	srsf7b	55	67.200	ENSHGLG00000005295	-	89	67.717	Heterocephalus_glaber_female
ENSPREG00000006149	srsf7b	55	67.200	ENSHGLG00100014570	-	89	67.717	Heterocephalus_glaber_male
ENSPREG00000006149	srsf7b	55	89.167	ENSHGLG00100006124	-	89	89.344	Heterocephalus_glaber_male
ENSPREG00000006149	srsf7b	59	53.846	ENSIPUG00000017382	srsf3	59	77.333	Ictalurus_punctatus
ENSPREG00000006149	srsf7b	55	88.333	ENSIPUG00000011708	srsf7	69	88.525	Ictalurus_punctatus
ENSPREG00000006149	srsf7b	55	89.167	ENSSTOG00000004389	SRSF7	89	89.344	Ictidomys_tridecemlineatus
ENSPREG00000006149	srsf7b	55	89.167	ENSJJAG00000023079	Srsf7	51	89.344	Jaculus_jaculus
ENSPREG00000006149	srsf7b	68	58.553	ENSJJAG00000020230	-	74	64.228	Jaculus_jaculus
ENSPREG00000006149	srsf7b	50	79.091	ENSLACG00000018688	srsf7a	53	76.577	Latimeria_chalumnae
ENSPREG00000006149	srsf7b	54	89.916	ENSLACG00000004052	SRSF7	50	90.083	Latimeria_chalumnae
ENSPREG00000006149	srsf7b	51	73.874	ENSLOCG00000014314	-	66	67.769	Lepisosteus_oculatus
ENSPREG00000006149	srsf7b	54	89.916	ENSLOCG00000015778	srsf7b	51	90.164	Lepisosteus_oculatus
ENSPREG00000006149	srsf7b	55	89.167	ENSLAFG00000005666	SRSF7	76	89.344	Loxodonta_africana
ENSPREG00000006149	srsf7b	55	89.167	ENSMFAG00000001980	SRSF7	89	89.344	Macaca_fascicularis
ENSPREG00000006149	srsf7b	54	89.076	ENSMMUG00000011025	SRSF7	52	88.496	Macaca_mulatta
ENSPREG00000006149	srsf7b	54	89.076	ENSMNEG00000036669	SRSF7	54	89.344	Macaca_nemestrina
ENSPREG00000006149	srsf7b	55	89.167	ENSMLEG00000038852	SRSF7	89	89.344	Mandrillus_leucophaeus
ENSPREG00000006149	srsf7b	77	78.698	ENSMAMG00000017138	srsf7b	54	89.344	Mastacembelus_armatus
ENSPREG00000006149	srsf7b	51	90.090	ENSMGAG00000007415	SRSF7	52	90.265	Meleagris_gallopavo
ENSPREG00000006149	srsf7b	55	89.167	ENSMAUG00000017430	Srsf7	51	89.344	Mesocricetus_auratus
ENSPREG00000006149	srsf7b	53	74.138	ENSMAUG00000021932	-	61	72.951	Mesocricetus_auratus
ENSPREG00000006149	srsf7b	67	47.973	ENSMAUG00000011430	-	50	61.333	Mesocricetus_auratus
ENSPREG00000006149	srsf7b	54	89.076	ENSMICG00000005046	SRSF7	54	89.256	Microcebus_murinus
ENSPREG00000006149	srsf7b	56	86.066	ENSMOCG00000022763	-	51	86.667	Microtus_ochrogaster
ENSPREG00000006149	srsf7b	52	71.681	ENSMMOG00000005208	srsf7a	74	69.912	Mola_mola
ENSPREG00000006149	srsf7b	55	90.000	ENSMODG00000008669	-	52	90.164	Monodelphis_domestica
ENSPREG00000006149	srsf7b	54	85.714	ENSMODG00000023693	-	52	86.066	Monodelphis_domestica
ENSPREG00000006149	srsf7b	55	89.167	MGP_CAROLIEiJ_G0021902	Srsf7	51	89.344	Mus_caroli
ENSPREG00000006149	srsf7b	55	89.167	ENSMUSG00000024097	Srsf7	89	89.344	Mus_musculus
ENSPREG00000006149	srsf7b	55	88.333	MGP_PahariEiJ_G0020891	Srsf7	51	88.525	Mus_pahari
ENSPREG00000006149	srsf7b	55	89.167	MGP_SPRETEiJ_G0022817	Srsf7	51	89.344	Mus_spretus
ENSPREG00000006149	srsf7b	55	81.667	ENSMLUG00000015692	-	54	81.967	Myotis_lucifugus
ENSPREG00000006149	srsf7b	55	89.167	ENSMLUG00000009536	SRSF7	51	89.344	Myotis_lucifugus
ENSPREG00000006149	srsf7b	59	56.923	ENSMLUG00000030735	-	71	53.125	Myotis_lucifugus
ENSPREG00000006149	srsf7b	55	89.167	ENSNGAG00000014431	Srsf7	51	89.344	Nannospalax_galili
ENSPREG00000006149	srsf7b	52	70.796	ENSNBRG00000006601	srsf7a	73	69.027	Neolamprologus_brichardi
ENSPREG00000006149	srsf7b	55	89.167	ENSNLEG00000016349	SRSF7	89	89.344	Nomascus_leucogenys
ENSPREG00000006149	srsf7b	55	90.000	ENSMEUG00000016459	-	51	90.164	Notamacropus_eugenii
ENSPREG00000006149	srsf7b	50	86.239	ENSMEUG00000000773	-	58	86.607	Notamacropus_eugenii
ENSPREG00000006149	srsf7b	55	89.167	ENSOPRG00000010234	SRSF7	53	89.344	Ochotona_princeps
ENSPREG00000006149	srsf7b	55	89.167	ENSODEG00000010029	-	51	89.344	Octodon_degus
ENSPREG00000006149	srsf7b	52	74.336	ENSODEG00000008570	-	60	74.138	Octodon_degus
ENSPREG00000006149	srsf7b	50	89.091	ENSOANG00000004405	SRSF7	52	84.921	Ornithorhynchus_anatinus
ENSPREG00000006149	srsf7b	55	89.167	ENSOCUG00000004087	SRSF7	51	89.344	Oryctolagus_cuniculus
ENSPREG00000006149	srsf7b	64	47.518	ENSOMEG00000014893	srsf3b	50	77.333	Oryzias_melastigma
ENSPREG00000006149	srsf7b	55	89.167	ENSOGAG00000010169	SRSF7	50	89.344	Otolemur_garnettii
ENSPREG00000006149	srsf7b	57	88.800	ENSOARG00000008771	SRSF7	51	89.344	Ovis_aries
ENSPREG00000006149	srsf7b	54	89.076	ENSPPAG00000017907	SRSF7	54	89.344	Pan_paniscus
ENSPREG00000006149	srsf7b	55	89.167	ENSPPRG00000003682	SRSF7	56	89.344	Panthera_pardus
ENSPREG00000006149	srsf7b	55	89.167	ENSPTIG00000006350	SRSF7	56	89.344	Panthera_tigris_altaica
ENSPREG00000006149	srsf7b	54	89.076	ENSPTRG00000011851	SRSF7	55	88.496	Pan_troglodytes
ENSPREG00000006149	srsf7b	54	89.076	ENSPANG00000018079	SRSF7	54	89.344	Papio_anubis
ENSPREG00000006149	srsf7b	69	78.808	ENSPKIG00000017425	srsf7b	69	90.164	Paramormyrops_kingsleyae
ENSPREG00000006149	srsf7b	55	87.500	ENSPKIG00000022669	SRSF7	82	87.705	Paramormyrops_kingsleyae
ENSPREG00000006149	srsf7b	51	89.286	ENSPSIG00000004636	-	50	90.265	Pelodiscus_sinensis
ENSPREG00000006149	srsf7b	55	69.106	ENSPMGG00000021890	srsf7a	87	68.595	Periophthalmus_magnuspinnatus
ENSPREG00000006149	srsf7b	55	89.167	ENSPEMG00000015449	Srsf7	51	89.344	Peromyscus_maniculatus_bairdii
ENSPREG00000006149	srsf7b	51	74.775	ENSPMAG00000004472	srsf7a	55	74.074	Petromyzon_marinus
ENSPREG00000006149	srsf7b	55	90.000	ENSPCIG00000020694	-	89	90.164	Phascolarctos_cinereus
ENSPREG00000006149	srsf7b	55	85.833	ENSPCIG00000020726	-	90	86.066	Phascolarctos_cinereus
ENSPREG00000006149	srsf7b	100	95.197	ENSPFOG00000008820	srsf7b	100	95.197	Poecilia_formosa
ENSPREG00000006149	srsf7b	100	95.197	ENSPLAG00000023806	srsf7b	100	95.197	Poecilia_latipinna
ENSPREG00000006149	srsf7b	54	89.076	ENSPPYG00000012480	SRSF7	51	89.344	Pongo_abelii
ENSPREG00000006149	srsf7b	55	89.167	ENSPCAG00000011348	SRSF7	53	89.344	Procavia_capensis
ENSPREG00000006149	srsf7b	56	78.689	ENSPCOG00000023721	-	77	78.689	Propithecus_coquereli
ENSPREG00000006149	srsf7b	54	88.235	ENSPCOG00000019422	-	57	88.525	Propithecus_coquereli
ENSPREG00000006149	srsf7b	54	89.076	ENSPVAG00000012076	SRSF7	53	89.256	Pteropus_vampyrus
ENSPREG00000006149	srsf7b	55	88.333	ENSPNAG00000012546	srsf7b	51	88.525	Pygocentrus_nattereri
ENSPREG00000006149	srsf7b	56	76.230	ENSRNOG00000008398	AABR07055789.1	73	76.230	Rattus_norvegicus
ENSPREG00000006149	srsf7b	55	89.167	ENSRNOG00000027360	Srsf7	51	89.344	Rattus_norvegicus
ENSPREG00000006149	srsf7b	50	89.091	ENSRBIG00000024695	SRSF7	52	89.286	Rhinopithecus_bieti
ENSPREG00000006149	srsf7b	55	89.167	ENSRROG00000005080	SRSF7	89	89.344	Rhinopithecus_roxellana
ENSPREG00000006149	srsf7b	55	89.167	ENSSBOG00000025074	SRSF7	89	89.344	Saimiri_boliviensis_boliviensis
ENSPREG00000006149	srsf7b	51	90.090	ENSSHAG00000015970	-	81	90.265	Sarcophilus_harrisii
ENSPREG00000006149	srsf7b	54	85.714	ENSSHAG00000004597	-	52	86.066	Sarcophilus_harrisii
ENSPREG00000006149	srsf7b	55	88.333	ENSSFOG00015007348	SRSF7	51	88.525	Scleropages_formosus
ENSPREG00000006149	srsf7b	57	87.200	ENSSDUG00000021338	srsf7b	85	87.705	Seriola_dumerili
ENSPREG00000006149	srsf7b	97	64.977	ENSSLDG00000021463	srsf7b	92	70.936	Seriola_lalandi_dorsalis
ENSPREG00000006149	srsf7b	55	71.074	ENSSPAG00000022192	srsf7a	89	69.912	Stegastes_partitus
ENSPREG00000006149	srsf7b	56	91.803	ENSSPAG00000017204	srsf7b	87	91.803	Stegastes_partitus
ENSPREG00000006149	srsf7b	55	89.167	ENSSSCG00000008484	SRSF7	89	89.344	Sus_scrofa
ENSPREG00000006149	srsf7b	55	87.500	ENSTGUG00000002080	-	83	70.854	Taeniopygia_guttata
ENSPREG00000006149	srsf7b	50	83.636	ENSTTRG00000014324	SRSF7	51	83.929	Tursiops_truncatus
ENSPREG00000006149	srsf7b	55	89.167	ENSUAMG00000025051	-	89	89.344	Ursus_americanus
ENSPREG00000006149	srsf7b	55	89.167	ENSUMAG00000013534	SRSF7	51	89.344	Ursus_maritimus
ENSPREG00000006149	srsf7b	55	89.167	ENSVVUG00000018767	-	89	89.344	Vulpes_vulpes
ENSPREG00000006149	srsf7b	67	60.135	ENSVVUG00000006092	-	71	68.000	Vulpes_vulpes
ENSPREG00000006149	srsf7b	55	88.333	ENSXETG00000025300	srsf7	52	88.525	Xenopus_tropicalis
ENSPREG00000006149	srsf7b	54	71.429	ENSXCOG00000009381	srsf7a	87	70.796	Xiphophorus_couchianus
ENSPREG00000006149	srsf7b	58	100.000	ENSXCOG00000010843	srsf7b	83	100.000	Xiphophorus_couchianus