EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006176 (Gene tree)
Gene ID: 103460705
Gene Symbol: sympk
Alias: -
Full Name: symplekin
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 10511 bases
Position: chrKK215326.1:105281-115791
Accession: 103460705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009037	Symplekin_C	PF12295.8	2.6e-74	1	1
ENSPREP00000009059	Symplekin_C	PF12295.8	1.1e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009169	-	3724	XM_008402986	ENSPREP00000009059	1220 (aa)	XP_008401208	UPI0004A2F050
ENSPRET00000009208	-	726	-	ENSPREP00000009098	241 (aa)	-	-
ENSPRET00000009147	-	3818	-	ENSPREP00000009037	1149 (aa)	-	-

Gene Model

Click here to download ENSPREG00000006176's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03015	mRNA surveillance pathway	KEGG
pret04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006176	sympk	90	75.431	ENSG00000125755	SYMPK	85	79.167	Homo_sapiens
ENSPREG00000006176	sympk	100	84.402	ENSAPOG00000015934	sympk	98	86.293	Acanthochromis_polyacanthus
ENSPREG00000006176	sympk	90	75.614	ENSAMEG00000000680	SYMPK	87	75.383	Ailuropoda_melanoleuca
ENSPREG00000006176	sympk	89	88.909	ENSACIG00000006357	sympk	91	88.909	Amphilophus_citrinellus
ENSPREG00000006176	sympk	96	86.582	ENSAOCG00000024124	sympk	92	89.420	Amphiprion_ocellaris
ENSPREG00000006176	sympk	100	84.662	ENSAPEG00000003465	sympk	90	90.064	Amphiprion_percula
ENSPREG00000006176	sympk	100	83.218	ENSATEG00000008472	sympk	99	82.815	Anabas_testudineus
ENSPREG00000006176	sympk	91	72.042	ENSACAG00000004126	SYMPK	83	74.648	Anolis_carolinensis
ENSPREG00000006176	sympk	89	75.941	ENSANAG00000021087	SYMPK	97	76.273	Aotus_nancymaae
ENSPREG00000006176	sympk	93	87.357	ENSACLG00000001813	sympk	90	89.636	Astatotilapia_calliptera
ENSPREG00000006176	sympk	93	80.149	ENSAMXG00000013677	sympk	89	82.569	Astyanax_mexicanus
ENSPREG00000006176	sympk	90	75.159	ENSBTAG00000012101	SYMPK	87	74.932	Bos_taurus
ENSPREG00000006176	sympk	89	75.849	ENSCJAG00000012172	SYMPK	97	74.544	Callithrix_jacchus
ENSPREG00000006176	sympk	90	75.614	ENSCAFG00000004376	SYMPK	87	75.383	Canis_familiaris
ENSPREG00000006176	sympk	90	75.614	ENSCAFG00020001815	SYMPK	87	75.383	Canis_lupus_dingo
ENSPREG00000006176	sympk	90	75.249	ENSCHIG00000026784	SYMPK	87	75.023	Capra_hircus
ENSPREG00000006176	sympk	91	74.529	ENSTSYG00000006268	SYMPK	95	74.451	Carlito_syrichta
ENSPREG00000006176	sympk	86	73.689	ENSCAPG00000005112	SYMPK	94	73.689	Cavia_aperea
ENSPREG00000006176	sympk	93	73.573	ENSCPOG00000010434	SYMPK	88	74.932	Cavia_porcellus
ENSPREG00000006176	sympk	89	75.941	ENSCCAG00000036309	SYMPK	97	76.046	Cebus_capucinus
ENSPREG00000006176	sympk	92	74.764	ENSCATG00000045107	SYMPK	98	76.023	Cercocebus_atys
ENSPREG00000006176	sympk	93	73.638	ENSCLAG00000001206	SYMPK	87	74.910	Chinchilla_lanigera
ENSPREG00000006176	sympk	90	75.521	ENSCSAG00000003115	SYMPK	87	75.293	Chlorocebus_sabaeus
ENSPREG00000006176	sympk	69	90.909	ENSCHOG00000012456	SYMPK	75	90.909	Choloepus_hoffmanni
ENSPREG00000006176	sympk	98	70.000	ENSCPBG00000007170	SYMPK	84	75.184	Chrysemys_picta_bellii
ENSPREG00000006176	sympk	90	47.121	ENSCING00000021232	-	97	47.403	Ciona_intestinalis
ENSPREG00000006176	sympk	87	46.881	ENSCSAVG00000005154	-	100	47.552	Ciona_savignyi
ENSPREG00000006176	sympk	93	73.444	ENSCANG00000040907	SYMPK	96	74.547	Colobus_angolensis_palliatus
ENSPREG00000006176	sympk	83	74.887	ENSCGRG00001010086	Sympk	84	74.887	Cricetulus_griseus_chok1gshd
ENSPREG00000006176	sympk	97	84.425	ENSCSEG00000016802	sympk	91	87.702	Cynoglossus_semilaevis
ENSPREG00000006176	sympk	98	77.031	ENSDARG00000059553	sympk	87	82.629	Danio_rerio
ENSPREG00000006176	sympk	100	67.987	ENSDNOG00000016149	SYMPK	86	74.572	Dasypus_novemcinctus
ENSPREG00000006176	sympk	87	38.053	FBgn0037371	Sym	91	37.361	Drosophila_melanogaster
ENSPREG00000006176	sympk	74	61.175	ENSEBUG00000000387	sympk	89	60.964	Eptatretus_burgeri
ENSPREG00000006176	sympk	90	75.340	ENSEASG00005014227	SYMPK	87	75.113	Equus_asinus_asinus
ENSPREG00000006176	sympk	90	75.340	ENSECAG00000008163	SYMPK	87	75.113	Equus_caballus
ENSPREG00000006176	sympk	70	84.000	ENSEEUG00000000270	-	78	84.000	Erinaceus_europaeus
ENSPREG00000006176	sympk	90	84.986	ENSELUG00000000850	sympk	87	84.873	Esox_lucius
ENSPREG00000006176	sympk	90	75.614	ENSFCAG00000007337	SYMPK	87	75.383	Felis_catus
ENSPREG00000006176	sympk	90	75.023	ENSFDAG00000011272	SYMPK	87	74.639	Fukomys_damarensis
ENSPREG00000006176	sympk	100	87.551	ENSFHEG00000010274	sympk	92	91.300	Fundulus_heteroclitus
ENSPREG00000006176	sympk	90	81.942	ENSGMOG00000002357	sympk	99	82.222	Gadus_morhua
ENSPREG00000006176	sympk	100	97.213	ENSGAFG00000010976	sympk	100	97.213	Gambusia_affinis
ENSPREG00000006176	sympk	99	81.086	ENSGACG00000002735	sympk	99	86.425	Gasterosteus_aculeatus
ENSPREG00000006176	sympk	69	66.832	ENSGAGG00000012538	-	88	73.141	Gopherus_agassizii
ENSPREG00000006176	sympk	90	75.431	ENSGGOG00000003410	SYMPK	95	75.665	Gorilla_gorilla
ENSPREG00000006176	sympk	93	87.270	ENSHBUG00000023564	sympk	90	89.545	Haplochromis_burtoni
ENSPREG00000006176	sympk	90	71.351	ENSHGLG00000005228	SYMPK	86	71.145	Heterocephalus_glaber_female
ENSPREG00000006176	sympk	91	74.508	ENSHGLG00100018571	SYMPK	88	75.340	Heterocephalus_glaber_male
ENSPREG00000006176	sympk	90	81.985	ENSHCOG00000017400	sympk	91	82.277	Hippocampus_comes
ENSPREG00000006176	sympk	89	82.227	ENSIPUG00000024020	SYMPK	88	81.743	Ictalurus_punctatus
ENSPREG00000006176	sympk	90	75.658	ENSSTOG00000001534	SYMPK	86	75.658	Ictidomys_tridecemlineatus
ENSPREG00000006176	sympk	93	73.661	ENSJJAG00000006633	Sympk	86	75.023	Jaculus_jaculus
ENSPREG00000006176	sympk	100	85.169	ENSKMAG00000016292	sympk	91	89.158	Kryptolebias_marmoratus
ENSPREG00000006176	sympk	100	82.373	ENSLBEG00000027913	sympk	95	86.301	Labrus_bergylta
ENSPREG00000006176	sympk	89	69.231	ENSLACG00000016497	SYMPK	91	68.909	Latimeria_chalumnae
ENSPREG00000006176	sympk	90	75.566	ENSLAFG00000008726	SYMPK	87	75.338	Loxodonta_africana
ENSPREG00000006176	sympk	90	75.521	ENSMMUG00000015428	SYMPK	93	75.000	Macaca_mulatta
ENSPREG00000006176	sympk	91	75.067	ENSMNEG00000019439	SYMPK	98	76.023	Macaca_nemestrina
ENSPREG00000006176	sympk	93	74.012	ENSMLEG00000040508	SYMPK	98	76.023	Mandrillus_leucophaeus
ENSPREG00000006176	sympk	95	85.923	ENSMAMG00000010486	sympk	91	88.172	Mastacembelus_armatus
ENSPREG00000006176	sympk	93	87.357	ENSMZEG00005014146	sympk	90	89.636	Maylandia_zebra
ENSPREG00000006176	sympk	87	75.398	ENSMAUG00000015657	Sympk	84	75.398	Mesocricetus_auratus
ENSPREG00000006176	sympk	90	75.096	ENSMICG00000001871	SYMPK	90	74.234	Microcebus_murinus
ENSPREG00000006176	sympk	90	75.068	ENSMOCG00000008388	Sympk	85	75.068	Microtus_ochrogaster
ENSPREG00000006176	sympk	100	79.391	ENSMMOG00000019227	sympk	95	84.484	Mola_mola
ENSPREG00000006176	sympk	89	75.252	ENSMODG00000021534	SYMPK	85	75.183	Monodelphis_domestica
ENSPREG00000006176	sympk	77	87.670	ENSMALG00000008347	sympk	96	85.410	Monopterus_albus
ENSPREG00000006176	sympk	90	75.068	MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	Mus_caroli
ENSPREG00000006176	sympk	90	74.977	ENSMUSG00000023118	Sympk	76	85.321	Mus_musculus
ENSPREG00000006176	sympk	90	74.977	MGP_PahariEiJ_G0021127	Sympk	77	85.321	Mus_pahari
ENSPREG00000006176	sympk	90	75.068	MGP_SPRETEiJ_G0030351	-	77	85.321	Mus_spretus
ENSPREG00000006176	sympk	90	74.317	ENSMPUG00000005505	SYMPK	86	74.097	Mustela_putorius_furo
ENSPREG00000006176	sympk	78	72.222	ENSMLUG00000001359	SYMPK	89	72.222	Myotis_lucifugus
ENSPREG00000006176	sympk	90	74.977	ENSNGAG00000000820	Sympk	86	74.977	Nannospalax_galili
ENSPREG00000006176	sympk	95	86.040	ENSNBRG00000018101	sympk	92	89.306	Neolamprologus_brichardi
ENSPREG00000006176	sympk	90	63.123	ENSNLEG00000002369	SYMPK	86	63.869	Nomascus_leucogenys
ENSPREG00000006176	sympk	90	73.569	ENSOPRG00000009967	SYMPK	86	73.569	Ochotona_princeps
ENSPREG00000006176	sympk	97	72.133	ENSODEG00000007519	SYMPK	87	75.113	Octodon_degus
ENSPREG00000006176	sympk	94	86.150	ENSONIG00000016802	sympk	96	88.949	Oreochromis_niloticus
ENSPREG00000006176	sympk	78	74.367	ENSOCUG00000005511	SYMPK	88	74.367	Oryctolagus_cuniculus
ENSPREG00000006176	sympk	100	82.078	ENSORLG00000015338	sympk	97	85.983	Oryzias_latipes
ENSPREG00000006176	sympk	100	82.424	ENSORLG00020004402	sympk	91	87.094	Oryzias_latipes_hni
ENSPREG00000006176	sympk	100	82.165	ENSORLG00015005712	sympk	91	87.004	Oryzias_latipes_hsok
ENSPREG00000006176	sympk	100	82.944	ENSOMEG00000022561	sympk	91	88.149	Oryzias_melastigma
ENSPREG00000006176	sympk	90	75.521	ENSOGAG00000013483	SYMPK	87	75.293	Otolemur_garnettii
ENSPREG00000006176	sympk	90	72.298	ENSOARG00000010349	SYMPK	86	72.298	Ovis_aries
ENSPREG00000006176	sympk	90	75.431	ENSPPAG00000043204	SYMPK	94	74.863	Pan_paniscus
ENSPREG00000006176	sympk	90	75.614	ENSPPRG00000004282	SYMPK	87	75.383	Panthera_pardus
ENSPREG00000006176	sympk	92	74.763	ENSPTIG00000015420	SYMPK	92	75.521	Panthera_tigris_altaica
ENSPREG00000006176	sympk	90	75.431	ENSPTRG00000011169	SYMPK	94	74.863	Pan_troglodytes
ENSPREG00000006176	sympk	90	75.521	ENSPANG00000019930	SYMPK	98	76.023	Papio_anubis
ENSPREG00000006176	sympk	90	83.152	ENSPKIG00000017132	sympk	89	83.243	Paramormyrops_kingsleyae
ENSPREG00000006176	sympk	90	74.977	ENSPEMG00000007564	Sympk	86	74.842	Peromyscus_maniculatus_bairdii
ENSPREG00000006176	sympk	89	65.377	ENSPMAG00000004936	sympk	100	65.259	Petromyzon_marinus
ENSPREG00000006176	sympk	91	74.419	ENSPCIG00000024476	SYMPK	90	72.759	Phascolarctos_cinereus
ENSPREG00000006176	sympk	100	97.824	ENSPFOG00000001194	sympk	100	97.705	Poecilia_formosa
ENSPREG00000006176	sympk	100	97.737	ENSPLAG00000012995	sympk	100	97.705	Poecilia_latipinna
ENSPREG00000006176	sympk	100	97.824	ENSPMEG00000008099	sympk	100	97.705	Poecilia_mexicana
ENSPREG00000006176	sympk	89	75.691	ENSPPYG00000010135	SYMPK	97	75.691	Pongo_abelii
ENSPREG00000006176	sympk	84	76.419	ENSPCAG00000005182	SYMPK	80	75.862	Procavia_capensis
ENSPREG00000006176	sympk	93	73.749	ENSPCOG00000023740	SYMPK	97	75.619	Propithecus_coquereli
ENSPREG00000006176	sympk	90	73.980	ENSPVAG00000001355	SYMPK	89	73.760	Pteropus_vampyrus
ENSPREG00000006176	sympk	93	87.182	ENSPNYG00000011455	sympk	89	89.455	Pundamilia_nyererei
ENSPREG00000006176	sympk	98	77.904	ENSPNAG00000016505	sympk	87	82.692	Pygocentrus_nattereri
ENSPREG00000006176	sympk	90	75.121	ENSRNOG00000014353	Sympk	85	75.114	Rattus_norvegicus
ENSPREG00000006176	sympk	92	74.764	ENSRBIG00000040963	SYMPK	97	76.250	Rhinopithecus_bieti
ENSPREG00000006176	sympk	90	75.521	ENSRROG00000024834	SYMPK	95	75.964	Rhinopithecus_roxellana
ENSPREG00000006176	sympk	89	75.849	ENSSBOG00000034497	SYMPK	95	74.863	Saimiri_boliviensis_boliviensis
ENSPREG00000006176	sympk	91	73.482	ENSSHAG00000003139	SYMPK	96	73.543	Sarcophilus_harrisii
ENSPREG00000006176	sympk	92	81.179	ENSSFOG00015006974	sympk	89	82.849	Scleropages_formosus
ENSPREG00000006176	sympk	96	84.796	ENSSMAG00000018130	sympk	72	88.385	Scophthalmus_maximus
ENSPREG00000006176	sympk	100	83.876	ENSSDUG00000007092	sympk	91	88.600	Seriola_dumerili
ENSPREG00000006176	sympk	100	83.876	ENSSLDG00000014774	sympk	96	86.911	Seriola_lalandi_dorsalis
ENSPREG00000006176	sympk	57	81.538	ENSSARG00000004274	-	58	81.538	Sorex_araneus
ENSPREG00000006176	sympk	100	84.835	ENSSPAG00000000854	sympk	99	84.634	Stegastes_partitus
ENSPREG00000006176	sympk	90	75.521	ENSSSCG00000003093	SYMPK	87	75.293	Sus_scrofa
ENSPREG00000006176	sympk	99	82.040	ENSTRUG00000010202	sympk	91	85.804	Takifugu_rubripes
ENSPREG00000006176	sympk	89	87.230	ENSTNIG00000017855	sympk	99	85.405	Tetraodon_nigroviridis
ENSPREG00000006176	sympk	79	87.013	ENSTBEG00000000454	SYMPK	75	87.013	Tupaia_belangeri
ENSPREG00000006176	sympk	90	67.543	ENSTTRG00000014311	SYMPK	87	67.358	Tursiops_truncatus
ENSPREG00000006176	sympk	93	71.993	ENSUAMG00000022272	SYMPK	93	73.684	Ursus_americanus
ENSPREG00000006176	sympk	90	75.614	ENSUMAG00000023698	SYMPK	87	75.383	Ursus_maritimus
ENSPREG00000006176	sympk	92	74.136	ENSVVUG00000003024	SYMPK	94	75.941	Vulpes_vulpes
ENSPREG00000006176	sympk	91	68.821	ENSXETG00000024453	sympk	91	69.774	Xenopus_tropicalis
ENSPREG00000006176	sympk	89	95.821	ENSXCOG00000015368	sympk	100	95.922	Xiphophorus_couchianus
ENSPREG00000006176	sympk	100	96.721	ENSXMAG00000005737	sympk	100	96.721	Xiphophorus_maculatus