EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006218 (Gene tree)
Gene ID: 103471889
Gene Symbol: srp72
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 15408 bases
Position: chrLG10:27708242-27723649
Accession: 103471889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009186	SRP72	PF08492.12	4.9e-22	1	1
ENSPREP00000009155	SRP72	PF08492.12	5.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009265	-	5948	XM_008421155	ENSPREP00000009155	668 (aa)	XP_008419377	UPI0004A2B138
ENSPRET00000009296	-	1830	-	ENSPREP00000009186	609 (aa)	-	-

Gene Model

Click here to download ENSPREG00000006218's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006218	srp72	97	76.852	ENSG00000174780	SRP72	100	75.980	Homo_sapiens
ENSPREG00000006218	srp72	99	89.819	ENSAPOG00000019438	srp72	99	91.133	Acanthochromis_polyacanthus
ENSPREG00000006218	srp72	96	77.344	ENSAMEG00000008469	SRP72	99	76.831	Ailuropoda_melanoleuca
ENSPREG00000006218	srp72	100	91.505	ENSACIG00000000488	srp72	100	91.505	Amphilophus_citrinellus
ENSPREG00000006218	srp72	100	90.882	ENSAOCG00000011256	srp72	100	92.078	Amphiprion_ocellaris
ENSPREG00000006218	srp72	100	91.629	ENSAPEG00000001512	srp72	100	91.629	Amphiprion_percula
ENSPREG00000006218	srp72	99	85.644	ENSATEG00000006781	srp72	99	92.033	Anabas_testudineus
ENSPREG00000006218	srp72	99	76.923	ENSAPLG00000008751	SRP72	98	76.923	Anas_platyrhynchos
ENSPREG00000006218	srp72	97	76.935	ENSACAG00000002381	SRP72	98	76.532	Anolis_carolinensis
ENSPREG00000006218	srp72	97	75.465	ENSANAG00000020836	-	100	75.327	Aotus_nancymaae
ENSPREG00000006218	srp72	100	91.779	ENSACLG00000014617	srp72	100	91.779	Astatotilapia_calliptera
ENSPREG00000006218	srp72	98	83.817	ENSAMXG00000004011	srp72	100	83.731	Astyanax_mexicanus
ENSPREG00000006218	srp72	97	76.852	ENSBTAG00000010593	SRP72	99	76.682	Bos_taurus
ENSPREG00000006218	srp72	97	76.080	ENSCJAG00000017998	SRP72	100	75.163	Callithrix_jacchus
ENSPREG00000006218	srp72	97	77.160	ENSCAFG00000002244	SRP72	99	76.981	Canis_familiaris
ENSPREG00000006218	srp72	97	77.160	ENSCAFG00020027338	SRP72	100	76.307	Canis_lupus_dingo
ENSPREG00000006218	srp72	97	75.193	ENSCHIG00000021465	SRP72	99	75.075	Capra_hircus
ENSPREG00000006218	srp72	96	77.019	ENSTSYG00000010571	-	100	75.994	Carlito_syrichta
ENSPREG00000006218	srp72	83	68.182	ENSCAPG00000016668	SRP72	99	68.311	Cavia_aperea
ENSPREG00000006218	srp72	97	76.852	ENSCPOG00000000218	SRP72	100	75.817	Cavia_porcellus
ENSPREG00000006218	srp72	95	76.899	ENSCCAG00000030683	-	94	76.899	Cebus_capucinus
ENSPREG00000006218	srp72	97	74.343	ENSCCAG00000030830	-	99	74.251	Cebus_capucinus
ENSPREG00000006218	srp72	97	76.698	ENSCATG00000008072	SRP72	100	75.817	Cercocebus_atys
ENSPREG00000006218	srp72	98	60.890	ENSCATG00000045359	-	95	60.583	Cercocebus_atys
ENSPREG00000006218	srp72	97	76.543	ENSCLAG00000003571	SRP72	100	75.817	Chinchilla_lanigera
ENSPREG00000006218	srp72	97	72.840	ENSCSAG00000005079	SRP72	99	72.687	Chlorocebus_sabaeus
ENSPREG00000006218	srp72	90	76.316	ENSCHOG00000013240	SRP72	89	76.316	Choloepus_hoffmanni
ENSPREG00000006218	srp72	96	77.726	ENSCPBG00000015015	SRP72	99	77.130	Chrysemys_picta_bellii
ENSPREG00000006218	srp72	96	42.365	ENSCING00000002417	-	98	42.082	Ciona_intestinalis
ENSPREG00000006218	srp72	92	42.700	ENSCSAVG00000011288	-	98	41.691	Ciona_savignyi
ENSPREG00000006218	srp72	99	51.347	ENSCANG00000037920	-	98	53.120	Colobus_angolensis_palliatus
ENSPREG00000006218	srp72	97	76.698	ENSCANG00000041709	SRP72	100	75.817	Colobus_angolensis_palliatus
ENSPREG00000006218	srp72	100	75.817	ENSCGRG00001013548	Srp72	100	75.654	Cricetulus_griseus_chok1gshd
ENSPREG00000006218	srp72	95	76.887	ENSCGRG00000003013	Srp72	99	76.730	Cricetulus_griseus_crigri
ENSPREG00000006218	srp72	98	89.908	ENSCSEG00000003616	srp72	100	89.985	Cynoglossus_semilaevis
ENSPREG00000006218	srp72	91	95.238	ENSCVAG00000001520	srp72	100	95.238	Cyprinodon_variegatus
ENSPREG00000006218	srp72	85	82.105	ENSDARG00000014139	srp72	99	81.818	Danio_rerio
ENSPREG00000006218	srp72	97	72.923	ENSDNOG00000039012	SRP72	83	73.174	Dasypus_novemcinctus
ENSPREG00000006218	srp72	96	76.168	ENSDORG00000000171	Srp72	99	75.785	Dipodomys_ordii
ENSPREG00000006218	srp72	96	40.155	FBgn0038810	Srp72	98	39.909	Drosophila_melanogaster
ENSPREG00000006218	srp72	96	76.875	ENSETEG00000005191	SRP72	99	76.532	Echinops_telfairi
ENSPREG00000006218	srp72	74	62.195	ENSEBUG00000003696	srp72	97	62.449	Eptatretus_burgeri
ENSPREG00000006218	srp72	97	76.698	ENSEASG00005017747	SRP72	99	76.532	Equus_asinus_asinus
ENSPREG00000006218	srp72	97	76.543	ENSECAG00000006920	SRP72	99	76.383	Equus_caballus
ENSPREG00000006218	srp72	100	83.358	ENSELUG00000022415	srp72	100	83.358	Esox_lucius
ENSPREG00000006218	srp72	96	77.019	ENSFCAG00000027600	SRP72	99	76.682	Felis_catus
ENSPREG00000006218	srp72	96	79.062	ENSFALG00000006713	SRP72	99	78.358	Ficedula_albicollis
ENSPREG00000006218	srp72	96	52.122	ENSFDAG00000009793	-	95	50.921	Fukomys_damarensis
ENSPREG00000006218	srp72	97	76.235	ENSFDAG00000002014	-	99	76.084	Fukomys_damarensis
ENSPREG00000006218	srp72	100	94.619	ENSFHEG00000017652	srp72	92	94.619	Fundulus_heteroclitus
ENSPREG00000006218	srp72	98	79.148	ENSGMOG00000005986	srp72	99	79.613	Gadus_morhua
ENSPREG00000006218	srp72	96	78.873	ENSGALG00000011403	SRP72	99	78.027	Gallus_gallus
ENSPREG00000006218	srp72	100	97.904	ENSGAFG00000017762	srp72	100	97.904	Gambusia_affinis
ENSPREG00000006218	srp72	100	86.866	ENSGACG00000016749	srp72	99	87.910	Gasterosteus_aculeatus
ENSPREG00000006218	srp72	86	78.671	ENSGAGG00000024611	SRP72	98	78.451	Gopherus_agassizii
ENSPREG00000006218	srp72	97	76.543	ENSGGOG00000013234	-	100	75.654	Gorilla_gorilla
ENSPREG00000006218	srp72	100	91.928	ENSHBUG00000020723	srp72	100	91.928	Haplochromis_burtoni
ENSPREG00000006218	srp72	97	76.543	ENSHGLG00000009791	SRP72	99	76.383	Heterocephalus_glaber_female
ENSPREG00000006218	srp72	96	59.938	ENSHGLG00000018597	-	99	60.451	Heterocephalus_glaber_female
ENSPREG00000006218	srp72	97	71.914	ENSHGLG00000005029	-	99	71.450	Heterocephalus_glaber_female
ENSPREG00000006218	srp72	97	60.914	ENSHGLG00000003950	-	97	70.667	Heterocephalus_glaber_female
ENSPREG00000006218	srp72	56	58.892	ENSHGLG00000003496	-	99	59.195	Heterocephalus_glaber_female
ENSPREG00000006218	srp72	98	60.899	ENSHGLG00000010633	-	99	68.684	Heterocephalus_glaber_female
ENSPREG00000006218	srp72	90	64.632	ENSHGLG00100009346	-	100	62.013	Heterocephalus_glaber_male
ENSPREG00000006218	srp72	97	60.745	ENSHGLG00100017133	-	97	70.222	Heterocephalus_glaber_male
ENSPREG00000006218	srp72	97	71.914	ENSHGLG00100011236	-	99	71.450	Heterocephalus_glaber_male
ENSPREG00000006218	srp72	97	76.543	ENSHGLG00100009021	SRP72	99	76.383	Heterocephalus_glaber_male
ENSPREG00000006218	srp72	98	88.685	ENSHCOG00000013760	srp72	100	88.789	Hippocampus_comes
ENSPREG00000006218	srp72	100	82.985	ENSIPUG00000000210	srp72	100	82.985	Ictalurus_punctatus
ENSPREG00000006218	srp72	97	76.698	ENSSTOG00000007305	SRP72	100	75.817	Ictidomys_tridecemlineatus
ENSPREG00000006218	srp72	96	76.406	ENSJJAG00000018324	Srp72	97	75.532	Jaculus_jaculus
ENSPREG00000006218	srp72	100	90.732	ENSKMAG00000003776	srp72	100	90.732	Kryptolebias_marmoratus
ENSPREG00000006218	srp72	98	83.206	ENSLOCG00000002628	srp72	98	83.030	Lepisosteus_oculatus
ENSPREG00000006218	srp72	97	76.543	ENSLAFG00000018307	SRP72	99	76.383	Loxodonta_africana
ENSPREG00000006218	srp72	98	61.656	ENSMFAG00000037164	-	97	62.250	Macaca_fascicularis
ENSPREG00000006218	srp72	97	76.698	ENSMFAG00000031065	SRP72	100	75.654	Macaca_fascicularis
ENSPREG00000006218	srp72	94	57.075	ENSMMUG00000021262	-	95	70.455	Macaca_mulatta
ENSPREG00000006218	srp72	98	76.489	ENSMMUG00000016368	SRP72	100	75.654	Macaca_mulatta
ENSPREG00000006218	srp72	97	76.698	ENSMNEG00000038065	-	100	75.654	Macaca_nemestrina
ENSPREG00000006218	srp72	95	75.987	ENSMLEG00000030140	-	94	75.355	Mandrillus_leucophaeus
ENSPREG00000006218	srp72	100	91.779	ENSMAMG00000014989	srp72	88	91.779	Mastacembelus_armatus
ENSPREG00000006218	srp72	100	91.928	ENSMZEG00005003325	srp72	100	91.928	Maylandia_zebra
ENSPREG00000006218	srp72	92	74.757	ENSMGAG00000008567	SRP72	100	77.447	Meleagris_gallopavo
ENSPREG00000006218	srp72	99	76.399	ENSMAUG00000001237	Srp72	99	75.934	Mesocricetus_auratus
ENSPREG00000006218	srp72	95	76.619	ENSMICG00000008507	-	94	76.619	Microcebus_murinus
ENSPREG00000006218	srp72	100	75.654	ENSMOCG00000020309	Srp72	100	75.490	Microtus_ochrogaster
ENSPREG00000006218	srp72	100	88.640	ENSMMOG00000002627	srp72	100	88.640	Mola_mola
ENSPREG00000006218	srp72	96	74.491	ENSMODG00000020697	SRP72	100	74.884	Monodelphis_domestica
ENSPREG00000006218	srp72	100	89.985	ENSMALG00000003747	srp72	100	90.083	Monopterus_albus
ENSPREG00000006218	srp72	100	75.163	MGP_CAROLIEiJ_G0027323	Srp72	100	75.000	Mus_caroli
ENSPREG00000006218	srp72	100	75.163	ENSMUSG00000036323	Srp72	100	75.000	Mus_musculus
ENSPREG00000006218	srp72	99	76.391	MGP_PahariEiJ_G0017103	Srp72	99	76.084	Mus_pahari
ENSPREG00000006218	srp72	100	75.163	MGP_SPRETEiJ_G0028317	Srp72	100	75.000	Mus_spretus
ENSPREG00000006218	srp72	96	77.344	ENSMPUG00000004828	SRP72	99	76.831	Mustela_putorius_furo
ENSPREG00000006218	srp72	96	76.911	ENSMLUG00000007344	SRP72	99	76.418	Myotis_lucifugus
ENSPREG00000006218	srp72	100	76.523	ENSNGAG00000012595	Srp72	100	77.889	Nannospalax_galili
ENSPREG00000006218	srp72	100	87.892	ENSNBRG00000014492	srp72	100	87.444	Neolamprologus_brichardi
ENSPREG00000006218	srp72	97	71.759	ENSNLEG00000008806	-	99	71.599	Nomascus_leucogenys
ENSPREG00000006218	srp72	96	67.239	ENSMEUG00000005164	SRP72	90	75.893	Notamacropus_eugenii
ENSPREG00000006218	srp72	96	76.094	ENSOPRG00000012521	SRP72	99	75.635	Ochotona_princeps
ENSPREG00000006218	srp72	96	75.000	ENSODEG00000012214	SRP72	99	74.589	Octodon_degus
ENSPREG00000006218	srp72	100	91.928	ENSONIG00000001446	srp72	99	91.928	Oreochromis_niloticus
ENSPREG00000006218	srp72	96	62.481	ENSOANG00000008562	SRP72	99	62.186	Ornithorhynchus_anatinus
ENSPREG00000006218	srp72	97	77.315	ENSOCUG00000012226	SRP72	99	76.981	Oryctolagus_cuniculus
ENSPREG00000006218	srp72	100	87.145	ENSORLG00000020418	srp72	99	88.042	Oryzias_latipes
ENSPREG00000006218	srp72	100	86.996	ENSORLG00020009138	srp72	98	86.078	Oryzias_latipes_hni
ENSPREG00000006218	srp72	100	87.294	ENSORLG00015018251	srp72	99	88.191	Oryzias_latipes_hsok
ENSPREG00000006218	srp72	98	87.652	ENSOMEG00000022008	srp72	98	88.788	Oryzias_melastigma
ENSPREG00000006218	srp72	97	77.160	ENSOGAG00000003578	SRP72	99	76.981	Otolemur_garnettii
ENSPREG00000006218	srp72	97	76.698	ENSOARG00000004329	SRP72	99	76.532	Ovis_aries
ENSPREG00000006218	srp72	99	54.367	ENSPPAG00000011428	-	95	54.711	Pan_paniscus
ENSPREG00000006218	srp72	80	62.127	ENSPPAG00000032490	-	91	62.037	Pan_paniscus
ENSPREG00000006218	srp72	97	76.852	ENSPPAG00000042265	SRP72	100	76.113	Pan_paniscus
ENSPREG00000006218	srp72	96	77.188	ENSPPRG00000015991	SRP72	100	76.144	Panthera_pardus
ENSPREG00000006218	srp72	96	77.188	ENSPTIG00000018786	SRP72	100	76.144	Panthera_tigris_altaica
ENSPREG00000006218	srp72	99	56.278	ENSPTRG00000048100	-	95	56.641	Pan_troglodytes
ENSPREG00000006218	srp72	97	76.852	ENSPTRG00000048466	-	100	75.980	Pan_troglodytes
ENSPREG00000006218	srp72	80	61.940	ENSPTRG00000043609	-	95	59.965	Pan_troglodytes
ENSPREG00000006218	srp72	97	76.698	ENSPANG00000005495	SRP72	100	75.817	Papio_anubis
ENSPREG00000006218	srp72	94	61.392	ENSPANG00000030230	-	97	61.685	Papio_anubis
ENSPREG00000006218	srp72	93	77.760	ENSPSIG00000003003	SRP72	100	77.760	Pelodiscus_sinensis
ENSPREG00000006218	srp72	99	76.399	ENSPEMG00000012828	-	99	75.934	Peromyscus_maniculatus_bairdii
ENSPREG00000006218	srp72	96	77.294	ENSPCIG00000000732	SRP72	99	76.682	Phascolarctos_cinereus
ENSPREG00000006218	srp72	100	98.952	ENSPFOG00000003480	srp72	100	98.952	Poecilia_formosa
ENSPREG00000006218	srp72	100	98.952	ENSPLAG00000020122	srp72	100	98.952	Poecilia_latipinna
ENSPREG00000006218	srp72	100	98.802	ENSPMEG00000019988	srp72	100	98.802	Poecilia_mexicana
ENSPREG00000006218	srp72	97	76.687	ENSPPYG00000014752	-	78	76.523	Pongo_abelii
ENSPREG00000006218	srp72	62	62.141	ENSPPYG00000009152	-	97	62.468	Pongo_abelii
ENSPREG00000006218	srp72	97	75.309	ENSPVAG00000005590	SRP72	99	75.187	Pteropus_vampyrus
ENSPREG00000006218	srp72	100	91.779	ENSPNYG00000001916	srp72	100	91.779	Pundamilia_nyererei
ENSPREG00000006218	srp72	100	84.328	ENSPNAG00000022424	srp72	100	84.328	Pygocentrus_nattereri
ENSPREG00000006218	srp72	99	74.251	ENSRNOG00000002100	LOC108348180	99	74.738	Rattus_norvegicus
ENSPREG00000006218	srp72	99	59.159	ENSRBIG00000029328	-	98	59.966	Rhinopithecus_bieti
ENSPREG00000006218	srp72	97	71.406	ENSRBIG00000042069	SRP72	99	71.407	Rhinopithecus_bieti
ENSPREG00000006218	srp72	97	76.698	ENSRROG00000035704	SRP72	100	75.817	Rhinopithecus_roxellana
ENSPREG00000006218	srp72	94	76.619	ENSSHAG00000000614	SRP72	99	74.889	Sarcophilus_harrisii
ENSPREG00000006218	srp72	100	83.134	ENSSFOG00015002026	srp72	100	83.134	Scleropages_formosus
ENSPREG00000006218	srp72	100	88.077	ENSSMAG00000007639	srp72	100	89.121	Scophthalmus_maximus
ENSPREG00000006218	srp72	100	91.330	ENSSDUG00000007345	srp72	98	92.526	Seriola_dumerili
ENSPREG00000006218	srp72	100	91.181	ENSSLDG00000021819	srp72	98	92.377	Seriola_lalandi_dorsalis
ENSPREG00000006218	srp72	81	74.271	ENSSARG00000005804	SRP72	77	74.121	Sorex_araneus
ENSPREG00000006218	srp72	96	77.760	ENSSPUG00000009740	SRP72	97	77.390	Sphenodon_punctatus
ENSPREG00000006218	srp72	100	92.078	ENSSPAG00000011565	srp72	100	93.124	Stegastes_partitus
ENSPREG00000006218	srp72	99	74.586	ENSSSCG00000008900	SRP72	99	74.439	Sus_scrofa
ENSPREG00000006218	srp72	96	78.627	ENSTGUG00000004767	SRP72	99	77.794	Taeniopygia_guttata
ENSPREG00000006218	srp72	98	87.920	ENSTRUG00000009831	srp72	100	88.042	Takifugu_rubripes
ENSPREG00000006218	srp72	100	89.686	ENSTNIG00000013073	srp72	99	89.686	Tetraodon_nigroviridis
ENSPREG00000006218	srp72	97	69.496	ENSTBEG00000007394	SRP72	91	69.598	Tupaia_belangeri
ENSPREG00000006218	srp72	92	76.911	ENSTTRG00000010945	SRP72	100	76.730	Tursiops_truncatus
ENSPREG00000006218	srp72	62	77.719	ENSUAMG00000001701	SRP72	99	77.444	Ursus_americanus
ENSPREG00000006218	srp72	96	77.188	ENSUMAG00000008151	SRP72	99	76.682	Ursus_maritimus
ENSPREG00000006218	srp72	97	75.772	ENSVPAG00000000458	SRP72	99	75.635	Vicugna_pacos
ENSPREG00000006218	srp72	97	77.006	ENSVVUG00000006020	SRP72	99	76.831	Vulpes_vulpes
ENSPREG00000006218	srp72	95	73.626	ENSXETG00000010205	srp72	100	73.626	Xenopus_tropicalis
ENSPREG00000006218	srp72	100	97.605	ENSXMAG00000018000	srp72	99	97.594	Xiphophorus_maculatus