EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006286 (Gene tree)
Gene ID: 103469226
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 24957 bases
Position: chrLG8:23567465-23592421
Accession: 103469226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009200	Ribonuc_2-5A	PF06479.12	1.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009310	-	3660	XM_008416777	ENSPREP00000009200	1060 (aa)	XP_008414999	UPI0004A2734D

Gene Model

Click here to download ENSPREG00000006286's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04140	Autophagy - animal	KEGG
pret04141	Protein processing in endoplasmic reticulum	KEGG
pret04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006286	ern1	97	87.861	ENSAPOG00000009999	ern1	96	87.861	Acanthochromis_polyacanthus
ENSPREG00000006286	ern1	99	85.835	ENSACIG00000021716	ern1	98	85.835	Amphilophus_citrinellus
ENSPREG00000006286	ern1	97	88.365	ENSAOCG00000012309	ern1	96	88.365	Amphiprion_ocellaris
ENSPREG00000006286	ern1	97	87.981	ENSAPEG00000011263	ern1	98	92.216	Amphiprion_percula
ENSPREG00000006286	ern1	99	85.473	ENSATEG00000024468	ern1	98	85.473	Anabas_testudineus
ENSPREG00000006286	ern1	97	88.027	ENSACLG00000027919	ern1	96	88.027	Astatotilapia_calliptera
ENSPREG00000006286	ern1	99	78.653	ENSAMXG00000000944	ern1	99	78.653	Astyanax_mexicanus
ENSPREG00000006286	ern1	90	88.108	ENSCSEG00000014500	ern1	99	85.982	Cynoglossus_semilaevis
ENSPREG00000006286	ern1	100	91.276	ENSCVAG00000002988	ern1	100	91.276	Cyprinodon_variegatus
ENSPREG00000006286	ern1	91	81.256	ENSDARG00000013997	ern1	100	81.535	Danio_rerio
ENSPREG00000006286	ern1	97	77.113	ENSELUG00000005957	ern1	99	77.113	Esox_lucius
ENSPREG00000006286	ern1	99	90.104	ENSFHEG00000005578	ern1	99	90.104	Fundulus_heteroclitus
ENSPREG00000006286	ern1	88	86.538	ENSGMOG00000011232	ern1	100	86.538	Gadus_morhua
ENSPREG00000006286	ern1	100	96.792	ENSGAFG00000020231	ern1	100	96.792	Gambusia_affinis
ENSPREG00000006286	ern1	88	89.850	ENSGACG00000011700	ern1	97	89.850	Gasterosteus_aculeatus
ENSPREG00000006286	ern1	94	88.409	ENSHBUG00000012581	ern1	95	88.409	Haplochromis_burtoni
ENSPREG00000006286	ern1	90	87.227	ENSHCOG00000016199	ern1	90	88.355	Hippocampus_comes
ENSPREG00000006286	ern1	91	82.613	ENSIPUG00000011083	ern1	93	82.613	Ictalurus_punctatus
ENSPREG00000006286	ern1	99	85.998	ENSKMAG00000019499	ern1	98	86.093	Kryptolebias_marmoratus
ENSPREG00000006286	ern1	98	81.437	ENSLBEG00000025907	ern1	99	81.437	Labrus_bergylta
ENSPREG00000006286	ern1	99	84.944	ENSMAMG00000023439	ern1	98	85.823	Mastacembelus_armatus
ENSPREG00000006286	ern1	97	88.027	ENSMZEG00005003221	ern1	96	88.027	Maylandia_zebra
ENSPREG00000006286	ern1	91	88.718	ENSMMOG00000007650	ern1	97	88.718	Mola_mola
ENSPREG00000006286	ern1	91	90.164	ENSMALG00000017775	ern1	89	90.164	Monopterus_albus
ENSPREG00000006286	ern1	94	89.109	ENSNBRG00000002179	ern1	94	89.109	Neolamprologus_brichardi
ENSPREG00000006286	ern1	90	89.854	ENSONIG00000017169	ern1	99	89.854	Oreochromis_niloticus
ENSPREG00000006286	ern1	99	84.041	ENSORLG00000008940	ern1	100	84.893	Oryzias_latipes
ENSPREG00000006286	ern1	99	83.672	ENSORLG00020018387	ern1	100	84.523	Oryzias_latipes_hni
ENSPREG00000006286	ern1	99	83.657	ENSORLG00015007946	ern1	100	84.508	Oryzias_latipes_hsok
ENSPREG00000006286	ern1	99	84.879	ENSOMEG00000011741	ern1	100	84.879	Oryzias_melastigma
ENSPREG00000006286	ern1	90	83.386	ENSPKIG00000005593	ern1	97	83.386	Paramormyrops_kingsleyae
ENSPREG00000006286	ern1	92	88.367	ENSPMGG00000020442	ern1	97	86.473	Periophthalmus_magnuspinnatus
ENSPREG00000006286	ern1	100	98.679	ENSPFOG00000007378	ern1	100	98.679	Poecilia_formosa
ENSPREG00000006286	ern1	100	98.679	ENSPLAG00000014780	ern1	100	98.679	Poecilia_latipinna
ENSPREG00000006286	ern1	100	98.962	ENSPMEG00000016324	ern1	100	98.962	Poecilia_mexicana
ENSPREG00000006286	ern1	97	88.027	ENSPNYG00000017929	ern1	98	90.079	Pundamilia_nyererei
ENSPREG00000006286	ern1	98	80.287	ENSPNAG00000029447	ern1	99	80.344	Pygocentrus_nattereri
ENSPREG00000006286	ern1	97	86.002	ENSSMAG00000015042	ern1	95	86.320	Scophthalmus_maximus
ENSPREG00000006286	ern1	99	86.803	ENSSDUG00000009098	ern1	98	86.803	Seriola_dumerili
ENSPREG00000006286	ern1	99	86.791	ENSSLDG00000023254	ern1	98	86.791	Seriola_lalandi_dorsalis
ENSPREG00000006286	ern1	96	88.652	ENSSPAG00000017539	ern1	95	88.652	Stegastes_partitus
ENSPREG00000006286	ern1	92	86.322	ENSTRUG00000001041	ern1	95	86.322	Takifugu_rubripes
ENSPREG00000006286	ern1	89	89.463	ENSTNIG00000017990	ern1	99	89.579	Tetraodon_nigroviridis
ENSPREG00000006286	ern1	97	93.708	ENSXCOG00000010330	ern1	97	98.256	Xiphophorus_couchianus
ENSPREG00000006286	ern1	100	97.075	ENSXMAG00000001310	ern1	100	97.075	Xiphophorus_maculatus