EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006291 (Gene tree)
Gene ID: 103476770
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5061 bases
Position: chrLG2:30025-35085
Accession: 103476770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009212	MMR_HSR1	PF01926.23	1.3e-05	1	1
ENSPREP00000009236	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSPREP00000009259	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009370	-	1218	-	ENSPREP00000009259	405 (aa)	-	-
ENSPRET00000009322	-	1191	XM_008429354	ENSPREP00000009212	396 (aa)	XP_008427576	-
ENSPRET00000009347	-	1203	XM_008429337	ENSPREP00000009236	400 (aa)	XP_008427559	-

Gene Model

Click here to download ENSPREG00000006291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006291	arl13b	54	31.364	ENSPREG00000015645	arl4cb	97	32.338
ENSPREG00000006291	arl13b	50	30.732	ENSPREG00000021699	-	100	30.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006291	arl13b	99	82.927	ENSAPOG00000013256	arl13b	99	81.951	Acanthochromis_polyacanthus
ENSPREG00000006291	arl13b	100	82.878	ENSACIG00000017582	arl13b	90	94.931	Amphilophus_citrinellus
ENSPREG00000006291	arl13b	99	83.171	ENSAOCG00000002828	arl13b	99	82.195	Amphiprion_ocellaris
ENSPREG00000006291	arl13b	95	82.642	ENSAPEG00000014654	arl13b	99	81.865	Amphiprion_percula
ENSPREG00000006291	arl13b	99	79.756	ENSATEG00000017586	arl13b	100	78.772	Anabas_testudineus
ENSPREG00000006291	arl13b	95	59.036	ENSACAG00000000523	ARL13B	99	58.654	Anolis_carolinensis
ENSPREG00000006291	arl13b	100	82.250	ENSACLG00000024227	arl13b	100	81.000	Astatotilapia_calliptera
ENSPREG00000006291	arl13b	100	72.993	ENSAMXG00000042824	arl13b	100	73.077	Astyanax_mexicanus
ENSPREG00000006291	arl13b	95	58.377	ENSCAPG00000006764	ARL13B	80	79.293	Cavia_aperea
ENSPREG00000006291	arl13b	99	57.286	ENSCPOG00000002558	ARL13B	99	57.035	Cavia_porcellus
ENSPREG00000006291	arl13b	95	58.394	ENSCLAG00000006379	ARL13B	100	57.590	Chinchilla_lanigera
ENSPREG00000006291	arl13b	100	60.648	ENSCPBG00000005599	ARL13B	100	59.954	Chrysemys_picta_bellii
ENSPREG00000006291	arl13b	99	77.859	ENSCSEG00000005258	arl13b	99	75.669	Cynoglossus_semilaevis
ENSPREG00000006291	arl13b	100	89.242	ENSCVAG00000001545	arl13b	91	98.261	Cyprinodon_variegatus
ENSPREG00000006291	arl13b	100	73.039	ENSDARG00000012763	arl13b	100	72.794	Danio_rerio
ENSPREG00000006291	arl13b	68	51.493	ENSEBUG00000006528	arl13b	90	51.493	Eptatretus_burgeri
ENSPREG00000006291	arl13b	79	72.659	ENSEEUG00000010823	ARL13B	76	71.119	Erinaceus_europaeus
ENSPREG00000006291	arl13b	94	56.824	ENSFALG00000001654	ARL13B	100	55.802	Ficedula_albicollis
ENSPREG00000006291	arl13b	100	61.021	ENSFDAG00000006556	ARL13B	100	61.163	Fukomys_damarensis
ENSPREG00000006291	arl13b	95	86.684	ENSFHEG00000016049	arl13b	99	85.640	Fundulus_heteroclitus
ENSPREG00000006291	arl13b	95	67.979	ENSGMOG00000018628	arl13b	100	68.241	Gadus_morhua
ENSPREG00000006291	arl13b	100	95.250	ENSGAFG00000000025	arl13b	100	93.500	Gambusia_affinis
ENSPREG00000006291	arl13b	99	75.430	ENSGACG00000014228	arl13b	99	74.939	Gasterosteus_aculeatus
ENSPREG00000006291	arl13b	100	58.796	ENSGAGG00000019336	ARL13B	100	58.796	Gopherus_agassizii
ENSPREG00000006291	arl13b	100	84.029	ENSHBUG00000020619	arl13b	100	82.801	Haplochromis_burtoni
ENSPREG00000006291	arl13b	95	78.158	ENSHCOG00000006106	arl13b	99	77.632	Hippocampus_comes
ENSPREG00000006291	arl13b	99	83.911	ENSKMAG00000001122	arl13b	99	82.921	Kryptolebias_marmoratus
ENSPREG00000006291	arl13b	99	76.585	ENSLBEG00000014612	arl13b	99	77.073	Labrus_bergylta
ENSPREG00000006291	arl13b	100	66.133	ENSLOCG00000010465	arl13b	100	66.133	Lepisosteus_oculatus
ENSPREG00000006291	arl13b	99	80.976	ENSMAMG00000021452	arl13b	99	80.000	Mastacembelus_armatus
ENSPREG00000006291	arl13b	100	84.029	ENSMZEG00005017827	arl13b	100	82.801	Maylandia_zebra
ENSPREG00000006291	arl13b	99	79.389	ENSMMOG00000010253	arl13b	99	78.947	Mola_mola
ENSPREG00000006291	arl13b	99	69.211	ENSMALG00000014655	arl13b	99	73.684	Monopterus_albus
ENSPREG00000006291	arl13b	100	60.465	MGP_CAROLIEiJ_G0020856	Arl13b	100	60.233	Mus_caroli
ENSPREG00000006291	arl13b	100	59.397	ENSMUSG00000022911	Arl13b	100	60.557	Mus_musculus
ENSPREG00000006291	arl13b	100	60.233	MGP_PahariEiJ_G0016561	Arl13b	100	61.021	Mus_pahari
ENSPREG00000006291	arl13b	100	59.861	MGP_SPRETEiJ_G0021763	Arl13b	100	61.021	Mus_spretus
ENSPREG00000006291	arl13b	95	59.854	ENSMLUG00000017473	ARL13B	96	59.854	Myotis_lucifugus
ENSPREG00000006291	arl13b	100	81.000	ENSNBRG00000004078	arl13b	87	94.470	Neolamprologus_brichardi
ENSPREG00000006291	arl13b	100	57.907	ENSNLEG00000001772	ARL13B	100	57.500	Nomascus_leucogenys
ENSPREG00000006291	arl13b	100	59.535	ENSODEG00000011381	ARL13B	100	60.000	Octodon_degus
ENSPREG00000006291	arl13b	100	79.493	ENSONIG00000001864	arl13b	100	78.571	Oreochromis_niloticus
ENSPREG00000006291	arl13b	99	80.893	ENSORLG00000006350	arl13b	86	93.548	Oryzias_latipes
ENSPREG00000006291	arl13b	99	79.800	ENSORLG00020013754	arl13b	99	79.052	Oryzias_latipes_hni
ENSPREG00000006291	arl13b	99	80.050	ENSORLG00015012586	arl13b	99	79.302	Oryzias_latipes_hsok
ENSPREG00000006291	arl13b	55	89.862	ENSOMEG00000010187	arl13b	84	89.862	Oryzias_melastigma
ENSPREG00000006291	arl13b	95	60.197	ENSPSIG00000018115	ARL13B	99	60.049	Pelodiscus_sinensis
ENSPREG00000006291	arl13b	99	79.950	ENSPMGG00000004584	arl13b	99	80.446	Periophthalmus_magnuspinnatus
ENSPREG00000006291	arl13b	97	46.411	ENSPCIG00000026984	ARL13B	95	44.286	Phascolarctos_cinereus
ENSPREG00000006291	arl13b	100	98.259	ENSPFOG00000005379	arl13b	100	98.259	Poecilia_formosa
ENSPREG00000006291	arl13b	95	97.878	ENSPLAG00000008699	arl13b	99	97.878	Poecilia_latipinna
ENSPREG00000006291	arl13b	97	97.423	ENSPMEG00000015387	arl13b	99	97.423	Poecilia_mexicana
ENSPREG00000006291	arl13b	95	80.577	ENSPNYG00000022879	arl13b	98	79.528	Pundamilia_nyererei
ENSPREG00000006291	arl13b	100	73.479	ENSPNAG00000003803	arl13b	100	72.993	Pygocentrus_nattereri
ENSPREG00000006291	arl13b	54	70.370	ENSSFOG00015023057	arl13b	85	70.370	Scleropages_formosus
ENSPREG00000006291	arl13b	57	81.778	ENSSFOG00015005491	arl13b	83	83.099	Scleropages_formosus
ENSPREG00000006291	arl13b	99	74.250	ENSSMAG00000015450	arl13b	99	75.000	Scophthalmus_maximus
ENSPREG00000006291	arl13b	95	82.383	ENSSDUG00000005560	arl13b	98	80.916	Seriola_dumerili
ENSPREG00000006291	arl13b	95	82.124	ENSSLDG00000013361	arl13b	99	80.570	Seriola_lalandi_dorsalis
ENSPREG00000006291	arl13b	99	59.579	ENSSARG00000003872	ARL13B	99	59.302	Sorex_araneus
ENSPREG00000006291	arl13b	58	80.000	ENSSPUG00000006649	ARL13B	88	79.263	Sphenodon_punctatus
ENSPREG00000006291	arl13b	97	82.071	ENSSPAG00000016442	arl13b	90	83.120	Stegastes_partitus
ENSPREG00000006291	arl13b	100	59.016	ENSTGUG00000013493	ARL13B	100	56.206	Taeniopygia_guttata
ENSPREG00000006291	arl13b	100	52.434	ENSTRUG00000013035	-	84	71.429	Takifugu_rubripes
ENSPREG00000006291	arl13b	53	72.727	ENSTRUG00000003641	arl13b	74	71.429	Takifugu_rubripes
ENSPREG00000006291	arl13b	100	55.944	ENSVVUG00000021511	ARL13B	100	55.012	Vulpes_vulpes
ENSPREG00000006291	arl13b	53	41.315	ENSXETG00000026166	arl13a	50	41.784	Xenopus_tropicalis
ENSPREG00000006291	arl13b	100	60.138	ENSXETG00000032383	ARL13B	100	74.275	Xenopus_tropicalis
ENSPREG00000006291	arl13b	100	86.500	ENSXCOG00000016955	arl13b	100	86.750	Xiphophorus_couchianus
ENSPREG00000006291	arl13b	100	96.491	ENSXMAG00000002089	arl13b	100	96.491	Xiphophorus_maculatus