EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006336 (Gene tree)
Gene ID: 103463721
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4380 bases
Position: chrLG4:21638196-21642575
Accession: 103463721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009307	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009419	-	657	XM_008407267	ENSPREP00000009307	218 (aa)	XP_008405489	UPI0004A4204B

Gene Model

Click here to download ENSPREG00000006336's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006336	-	75	49.102	ENSPREG00000017567	rab13	84	49.102
ENSPREG00000006336	-	78	38.043	ENSPREG00000000880	rab33ba	77	38.043
ENSPREG00000006336	-	73	56.250	ENSPREG00000010154	rab4a	75	56.250
ENSPREG00000006336	-	82	38.144	ENSPREG00000001864	-	65	43.333
ENSPREG00000006336	-	77	47.929	ENSPREG00000007129	RAB39B	79	47.929
ENSPREG00000006336	-	96	45.755	ENSPREG00000020321	rab1ab	99	45.755
ENSPREG00000006336	-	80	42.222	ENSPREG00000017487	rab12	83	39.151
ENSPREG00000006336	-	81	41.808	ENSPREG00000019783	RAB15	82	41.808
ENSPREG00000006336	-	74	30.636	ENSPREG00000006055	rasl11a	67	30.636
ENSPREG00000006336	-	76	52.410	ENSPREG00000004889	-	79	52.410
ENSPREG00000006336	-	76	42.353	ENSPREG00000006970	rab9b	77	42.353
ENSPREG00000006336	-	79	39.326	ENSPREG00000001832	rab9a	86	39.326
ENSPREG00000006336	-	75	30.636	ENSPREG00000019386	rasl11b	71	30.726
ENSPREG00000006336	-	96	39.524	ENSPREG00000014634	rab30	97	39.524
ENSPREG00000006336	-	100	86.239	ENSPREG00000009605	rab11a	100	86.239
ENSPREG00000006336	-	74	30.061	ENSPREG00000012803	rhebl1	88	30.061
ENSPREG00000006336	-	73	45.283	ENSPREG00000010284	rab15	75	45.283
ENSPREG00000006336	-	78	39.306	ENSPREG00000007017	zgc:101559	74	39.306
ENSPREG00000006336	-	96	39.713	ENSPREG00000005323	si:dkey-16l2.16	98	39.713
ENSPREG00000006336	-	100	97.248	ENSPREG00000014269	rab11bb	100	97.248
ENSPREG00000006336	-	78	53.801	ENSPREG00000014888	rab2a	81	53.801
ENSPREG00000006336	-	100	62.385	ENSPREG00000017337	rab25b	100	62.385
ENSPREG00000006336	-	96	44.076	ENSPREG00000017517	zgc:171927	99	44.076
ENSPREG00000006336	-	84	41.398	ENSPREG00000013962	rab42a	85	41.398
ENSPREG00000006336	-	99	80.556	ENSPREG00000017324	rab11al	99	80.556
ENSPREG00000006336	-	65	36.170	ENSPREG00000022509	rab23	78	35.625
ENSPREG00000006336	-	78	44.767	ENSPREG00000005923	rab18a	70	44.767
ENSPREG00000006336	-	77	30.233	ENSPREG00000010228	dnajc27	88	30.233
ENSPREG00000006336	-	74	43.478	ENSPREG00000010920	rab22a	83	43.478
ENSPREG00000006336	-	72	36.306	ENSPREG00000009535	RAB41	74	36.306
ENSPREG00000006336	-	99	63.594	ENSPREG00000006119	rab25a	90	75.676
ENSPREG00000006336	-	73	32.500	ENSPREG00000010752	rheb	87	32.500
ENSPREG00000006336	-	82	38.043	ENSPREG00000003221	rab33a	53	38.043
ENSPREG00000006336	-	74	33.929	ENSPREG00000020276	RAB29	81	33.929
ENSPREG00000006336	-	68	34.667	ENSPREG00000018287	KRAS	85	35.802
ENSPREG00000006336	-	75	47.239	ENSPREG00000010146	rab5c	89	41.063
ENSPREG00000006336	-	100	95.872	ENSPREG00000006357	rab11ba	78	95.872
ENSPREG00000006336	-	68	35.333	ENSPREG00000019341	hrasb	85	36.420
ENSPREG00000006336	-	73	30.120	ENSPREG00000017010	rasd4	77	30.120
ENSPREG00000006336	-	72	39.877	ENSPREG00000012148	RAB7A	78	39.877
ENSPREG00000006336	-	72	39.877	ENSPREG00000017750	RAB7A	78	39.877
ENSPREG00000006336	-	80	46.591	ENSPREG00000009597	-	83	46.591
ENSPREG00000006336	-	93	33.824	ENSPREG00000006363	rras	94	33.824
ENSPREG00000006336	-	77	36.471	ENSPREG00000014761	rabl2	80	36.471
ENSPREG00000006336	-	72	36.943	ENSPREG00000021505	rab6a	75	36.943
ENSPREG00000006336	-	74	32.927	ENSPREG00000016102	si:ch73-116o1.2	82	34.659
ENSPREG00000006336	-	76	52.410	ENSPREG00000003616	rab1ba	83	52.410
ENSPREG00000006336	-	71	34.177	ENSPREG00000022241	si:dkey-13a21.4	77	34.177
ENSPREG00000006336	-	74	41.317	ENSPREG00000012522	-	83	41.317
ENSPREG00000006336	-	77	46.707	ENSPREG00000022167	-	79	48.701
ENSPREG00000006336	-	77	51.786	ENSPREG00000017344	-	78	51.786
ENSPREG00000006336	-	72	35.669	ENSPREG00000015480	rab6ba	78	35.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006336	-	100	97.248	ENSAPOG00000023455	rab11bb	100	97.248	Acanthochromis_polyacanthus
ENSPREG00000006336	-	100	99.541	ENSACIG00000024376	-	100	99.541	Amphilophus_citrinellus
ENSPREG00000006336	-	100	85.780	ENSACIG00000019631	rab11bb	100	85.780	Amphilophus_citrinellus
ENSPREG00000006336	-	100	97.248	ENSAOCG00000018239	rab11bb	100	97.248	Amphiprion_ocellaris
ENSPREG00000006336	-	100	99.541	ENSAOCG00000018849	-	100	99.541	Amphiprion_ocellaris
ENSPREG00000006336	-	100	97.248	ENSAPEG00000016590	rab11bb	100	97.248	Amphiprion_percula
ENSPREG00000006336	-	100	99.083	ENSATEG00000023725	-	100	99.083	Anabas_testudineus
ENSPREG00000006336	-	100	97.248	ENSATEG00000017696	rab11bb	100	97.248	Anabas_testudineus
ENSPREG00000006336	-	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSPREG00000006336	-	100	99.541	ENSACLG00000005446	-	100	99.541	Astatotilapia_calliptera
ENSPREG00000006336	-	100	97.248	ENSACLG00000007076	rab11bb	100	97.248	Astatotilapia_calliptera
ENSPREG00000006336	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSPREG00000006336	-	100	96.330	ENSAMXG00000037623	-	100	96.330	Astyanax_mexicanus
ENSPREG00000006336	-	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSPREG00000006336	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSPREG00000006336	-	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSPREG00000006336	-	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSPREG00000006336	-	100	97.248	ENSCSEG00000012149	rab11bb	100	97.248	Cynoglossus_semilaevis
ENSPREG00000006336	-	100	99.083	ENSCSEG00000007239	-	100	99.083	Cynoglossus_semilaevis
ENSPREG00000006336	-	100	97.248	ENSCVAG00000017021	-	100	97.248	Cyprinodon_variegatus
ENSPREG00000006336	-	100	98.624	ENSCVAG00000019718	-	100	98.624	Cyprinodon_variegatus
ENSPREG00000006336	-	100	95.413	ENSCVAG00000019751	-	100	95.413	Cyprinodon_variegatus
ENSPREG00000006336	-	100	97.248	ENSDARG00000090086	rab11bb	100	97.248	Danio_rerio
ENSPREG00000006336	-	99	94.009	ENSETEG00000000905	-	99	94.009	Echinops_telfairi
ENSPREG00000006336	-	99	93.953	ENSEASG00005003708	-	99	93.953	Equus_asinus_asinus
ENSPREG00000006336	-	99	93.953	ENSECAG00000000716	RAB11B	99	93.953	Equus_caballus
ENSPREG00000006336	-	100	97.248	ENSELUG00000000916	-	100	97.248	Esox_lucius
ENSPREG00000006336	-	100	98.165	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSPREG00000006336	-	100	97.248	ENSELUG00000021148	rab11bb	100	97.248	Esox_lucius
ENSPREG00000006336	-	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSPREG00000006336	-	100	97.248	ENSFHEG00000018353	rab11bb	100	97.248	Fundulus_heteroclitus
ENSPREG00000006336	-	100	99.083	ENSFHEG00000022676	-	100	99.083	Fundulus_heteroclitus
ENSPREG00000006336	-	99	94.907	ENSGMOG00000009668	-	99	94.907	Gadus_morhua
ENSPREG00000006336	-	100	97.248	ENSGMOG00000009211	rab11bb	100	97.248	Gadus_morhua
ENSPREG00000006336	-	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSPREG00000006336	-	100	97.248	ENSGAFG00000007102	rab11bb	100	97.248	Gambusia_affinis
ENSPREG00000006336	-	100	96.789	ENSGACG00000015479	rab11bb	100	96.789	Gasterosteus_aculeatus
ENSPREG00000006336	-	100	94.954	ENSGACG00000013297	-	99	94.954	Gasterosteus_aculeatus
ENSPREG00000006336	-	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSPREG00000006336	-	100	97.248	ENSHBUG00000014777	rab11bb	100	97.248	Haplochromis_burtoni
ENSPREG00000006336	-	100	99.541	ENSHBUG00000009947	-	100	99.541	Haplochromis_burtoni
ENSPREG00000006336	-	100	97.706	ENSHCOG00000002423	rab11bb	100	97.706	Hippocampus_comes
ENSPREG00000006336	-	100	96.330	ENSHCOG00000000954	-	100	96.330	Hippocampus_comes
ENSPREG00000006336	-	100	93.119	ENSHCOG00000000985	-	100	93.119	Hippocampus_comes
ENSPREG00000006336	-	100	96.330	ENSIPUG00000025100	rab11b	100	96.330	Ictalurus_punctatus
ENSPREG00000006336	-	100	98.165	ENSIPUG00000019927	rab11bb	100	98.165	Ictalurus_punctatus
ENSPREG00000006336	-	100	99.541	ENSKMAG00000006170	-	100	99.541	Kryptolebias_marmoratus
ENSPREG00000006336	-	100	97.248	ENSKMAG00000009033	rab11bb	100	97.248	Kryptolebias_marmoratus
ENSPREG00000006336	-	100	97.248	ENSLBEG00000015248	rab11bb	100	97.248	Labrus_bergylta
ENSPREG00000006336	-	100	91.284	ENSLBEG00000005981	-	100	91.284	Labrus_bergylta
ENSPREG00000006336	-	100	98.624	ENSLBEG00000004172	-	100	98.624	Labrus_bergylta
ENSPREG00000006336	-	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSPREG00000006336	-	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSPREG00000006336	-	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSPREG00000006336	-	100	98.165	ENSMAMG00000018533	-	100	98.165	Mastacembelus_armatus
ENSPREG00000006336	-	100	96.789	ENSMAMG00000006378	rab11bb	100	96.789	Mastacembelus_armatus
ENSPREG00000006336	-	100	99.541	ENSMZEG00005010975	-	100	99.541	Maylandia_zebra
ENSPREG00000006336	-	100	97.248	ENSMZEG00005003352	rab11bb	100	97.248	Maylandia_zebra
ENSPREG00000006336	-	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSPREG00000006336	-	94	97.073	ENSMMOG00000007917	rab11bb	100	97.073	Mola_mola
ENSPREG00000006336	-	99	95.392	ENSMMOG00000001238	-	99	95.392	Mola_mola
ENSPREG00000006336	-	100	99.541	ENSMMOG00000001250	-	100	99.541	Mola_mola
ENSPREG00000006336	-	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSPREG00000006336	-	100	97.248	ENSMALG00000022187	rab11bb	100	97.248	Monopterus_albus
ENSPREG00000006336	-	94	88.889	ENSMLUG00000006677	-	100	88.889	Myotis_lucifugus
ENSPREG00000006336	-	100	97.248	ENSNBRG00000000372	rab11bb	100	97.248	Neolamprologus_brichardi
ENSPREG00000006336	-	100	99.541	ENSNBRG00000023885	-	100	99.541	Neolamprologus_brichardi
ENSPREG00000006336	-	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSPREG00000006336	-	100	99.541	ENSONIG00000002544	-	100	99.541	Oreochromis_niloticus
ENSPREG00000006336	-	100	97.248	ENSONIG00000010435	rab11bb	100	97.248	Oreochromis_niloticus
ENSPREG00000006336	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSPREG00000006336	-	100	96.789	ENSORLG00000013938	rab11bb	100	96.789	Oryzias_latipes
ENSPREG00000006336	-	99	97.696	ENSORLG00000015284	-	72	97.696	Oryzias_latipes
ENSPREG00000006336	-	100	96.789	ENSORLG00020019393	rab11bb	100	96.789	Oryzias_latipes_hni
ENSPREG00000006336	-	99	97.696	ENSORLG00020020844	RAB11B	99	97.696	Oryzias_latipes_hni
ENSPREG00000006336	-	99	97.696	ENSORLG00015016999	RAB11B	99	97.696	Oryzias_latipes_hsok
ENSPREG00000006336	-	100	96.789	ENSORLG00015020173	rab11bb	100	96.789	Oryzias_latipes_hsok
ENSPREG00000006336	-	100	97.248	ENSOMEG00000017806	-	100	97.248	Oryzias_melastigma
ENSPREG00000006336	-	100	98.624	ENSOMEG00000002562	-	100	98.624	Oryzias_melastigma
ENSPREG00000006336	-	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSPREG00000006336	-	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSPREG00000006336	-	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSPREG00000006336	-	100	96.789	ENSPKIG00000011703	-	100	96.789	Paramormyrops_kingsleyae
ENSPREG00000006336	-	100	97.248	ENSPKIG00000011640	rab11bb	100	97.248	Paramormyrops_kingsleyae
ENSPREG00000006336	-	98	96.729	ENSPKIG00000001389	-	69	96.729	Paramormyrops_kingsleyae
ENSPREG00000006336	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSPREG00000006336	-	100	97.248	ENSPMGG00000009435	rab11bb	100	97.248	Periophthalmus_magnuspinnatus
ENSPREG00000006336	-	100	97.706	ENSPMGG00000014333	-	100	97.706	Periophthalmus_magnuspinnatus
ENSPREG00000006336	-	99	94.009	ENSPMGG00000014336	-	99	94.009	Periophthalmus_magnuspinnatus
ENSPREG00000006336	-	97	96.698	ENSPCIG00000020371	-	99	96.698	Phascolarctos_cinereus
ENSPREG00000006336	-	100	99.541	ENSPFOG00000006224	-	100	99.541	Poecilia_formosa
ENSPREG00000006336	-	100	97.248	ENSPFOG00000024114	-	100	97.248	Poecilia_formosa
ENSPREG00000006336	-	100	97.248	ENSPLAG00000001598	rab11bb	100	97.248	Poecilia_latipinna
ENSPREG00000006336	-	100	99.541	ENSPLAG00000014207	-	100	99.541	Poecilia_latipinna
ENSPREG00000006336	-	100	99.541	ENSPMEG00000007842	-	100	99.541	Poecilia_mexicana
ENSPREG00000006336	-	100	97.248	ENSPMEG00000012389	rab11bb	100	97.248	Poecilia_mexicana
ENSPREG00000006336	-	100	99.541	ENSPNYG00000019611	-	100	99.541	Pundamilia_nyererei
ENSPREG00000006336	-	100	97.248	ENSPNYG00000004098	rab11bb	100	97.248	Pundamilia_nyererei
ENSPREG00000006336	-	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSPREG00000006336	-	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSPREG00000006336	-	100	73.394	ENSSFOG00015006245	-	100	73.394	Scleropages_formosus
ENSPREG00000006336	-	100	96.789	ENSSFOG00015009042	rab11bb	100	96.789	Scleropages_formosus
ENSPREG00000006336	-	100	96.789	ENSSMAG00000004922	rab11bb	100	96.789	Scophthalmus_maximus
ENSPREG00000006336	-	100	95.872	ENSSMAG00000018613	-	100	95.872	Scophthalmus_maximus
ENSPREG00000006336	-	100	97.248	ENSSDUG00000013558	rab11bb	100	97.248	Seriola_dumerili
ENSPREG00000006336	-	100	99.541	ENSSDUG00000002934	-	100	99.541	Seriola_dumerili
ENSPREG00000006336	-	100	97.248	ENSSLDG00000020676	rab11bb	100	97.248	Seriola_lalandi_dorsalis
ENSPREG00000006336	-	100	99.541	ENSSLDG00000005275	-	100	99.541	Seriola_lalandi_dorsalis
ENSPREG00000006336	-	100	97.248	ENSSPUG00000002243	-	100	97.248	Sphenodon_punctatus
ENSPREG00000006336	-	100	99.541	ENSSPAG00000014559	-	100	99.541	Stegastes_partitus
ENSPREG00000006336	-	100	97.248	ENSSPAG00000011419	rab11bb	100	97.248	Stegastes_partitus
ENSPREG00000006336	-	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSPREG00000006336	-	100	97.248	ENSTRUG00000022029	rab11bb	100	97.248	Takifugu_rubripes
ENSPREG00000006336	-	99	95.392	ENSTRUG00000021614	-	99	95.392	Takifugu_rubripes
ENSPREG00000006336	-	99	99.074	ENSTRUG00000021619	-	100	99.074	Takifugu_rubripes
ENSPREG00000006336	-	99	94.931	ENSTNIG00000013184	-	99	94.931	Tetraodon_nigroviridis
ENSPREG00000006336	-	99	99.074	ENSTNIG00000013182	-	100	99.074	Tetraodon_nigroviridis
ENSPREG00000006336	-	93	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSPREG00000006336	-	100	96.330	ENSTNIG00000011081	rab11bb	100	96.330	Tetraodon_nigroviridis
ENSPREG00000006336	-	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSPREG00000006336	-	100	96.347	ENSXETG00000025484	rab11b.1	99	96.347	Xenopus_tropicalis
ENSPREG00000006336	-	100	97.248	ENSXCOG00000008042	-	100	97.248	Xiphophorus_couchianus
ENSPREG00000006336	-	100	99.541	ENSXCOG00000009190	-	100	99.541	Xiphophorus_couchianus
ENSPREG00000006336	-	100	99.083	ENSXMAG00000024840	-	100	99.083	Xiphophorus_maculatus
ENSPREG00000006336	-	100	97.248	ENSXMAG00000011926	rab11bb	100	97.248	Xiphophorus_maculatus