EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006473 (Gene tree)
Gene ID: 103462658
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 91487 bases
Position: chrLG3:24723679-24815165
Accession: 103462658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009766	ResIII	PF04851.15	1.9e-06	1	1
ENSPREP00000009720	ResIII	PF04851.15	2.2e-06	1	1
ENSPREP00000009795	ResIII	PF04851.15	2.3e-06	1	1
ENSPREP00000009795	BRK	PF07533.16	1.6e-32	1	2
ENSPREP00000009795	BRK	PF07533.16	1.6e-32	2	2
ENSPREP00000009766	BRK	PF07533.16	2.1e-32	1	2
ENSPREP00000009766	BRK	PF07533.16	2.1e-32	2	2
ENSPREP00000009720	BRK	PF07533.16	2.4e-32	1	2
ENSPREP00000009720	BRK	PF07533.16	2.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009911	-	7461	XM_017304004	ENSPREP00000009795	2486 (aa)	XP_017159493	-
ENSPRET00000009835	-	13305	XM_008405563	ENSPREP00000009720	3004 (aa)	XP_008403785	UPI0004A351A5
ENSPRET00000009882	-	8658	-	ENSPREP00000009766	2885 (aa)	-	-

Gene Model

Click here to download ENSPREG00000006473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006473	chd9	70	71.093	ENSPREG00000022653	chd6	99	76.697
ENSPREG00000006473	chd9	59	70.148	ENSPREG00000014744	chd7	96	65.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006473	chd9	96	68.824	ENSG00000177200	CHD9	95	71.150	Homo_sapiens
ENSPREG00000006473	chd9	99	90.639	ENSAPOG00000023034	chd9	97	91.511	Acanthochromis_polyacanthus
ENSPREG00000006473	chd9	98	68.436	ENSAMEG00000016232	CHD9	84	71.752	Ailuropoda_melanoleuca
ENSPREG00000006473	chd9	97	83.921	ENSACIG00000004097	chd9	96	81.367	Amphilophus_citrinellus
ENSPREG00000006473	chd9	99	90.455	ENSAOCG00000005487	chd9	97	91.925	Amphiprion_ocellaris
ENSPREG00000006473	chd9	99	90.415	ENSAPEG00000009859	chd9	97	91.884	Amphiprion_percula
ENSPREG00000006473	chd9	99	88.696	ENSATEG00000002748	chd9	97	84.814	Anabas_testudineus
ENSPREG00000006473	chd9	98	68.615	ENSAPLG00000002826	CHD9	56	77.534	Anas_platyrhynchos
ENSPREG00000006473	chd9	68	74.766	ENSACAG00000016150	CHD9	88	68.631	Anolis_carolinensis
ENSPREG00000006473	chd9	95	69.199	ENSANAG00000015630	CHD9	93	68.905	Aotus_nancymaae
ENSPREG00000006473	chd9	98	86.428	ENSACLG00000016899	chd9	97	81.024	Astatotilapia_calliptera
ENSPREG00000006473	chd9	99	76.806	ENSAMXG00000005652	chd9	97	78.484	Astyanax_mexicanus
ENSPREG00000006473	chd9	98	68.191	ENSBTAG00000002287	CHD9	84	71.313	Bos_taurus
ENSPREG00000006473	chd9	98	68.107	ENSCJAG00000001573	CHD9	93	69.258	Callithrix_jacchus
ENSPREG00000006473	chd9	98	68.383	ENSCAFG00000009699	CHD9	84	72.113	Canis_familiaris
ENSPREG00000006473	chd9	98	68.383	ENSCAFG00020002879	CHD9	91	69.965	Canis_lupus_dingo
ENSPREG00000006473	chd9	98	67.590	ENSTSYG00000007693	CHD9	91	69.611	Carlito_syrichta
ENSPREG00000006473	chd9	88	58.165	ENSCAPG00000011604	CHD9	74	60.765	Cavia_aperea
ENSPREG00000006473	chd9	98	64.317	ENSCPOG00000036544	CHD9	83	67.928	Cavia_porcellus
ENSPREG00000006473	chd9	95	69.742	ENSCCAG00000036178	CHD9	93	69.858	Cebus_capucinus
ENSPREG00000006473	chd9	67	74.791	ENSCATG00000036753	CHD9	91	69.338	Cercocebus_atys
ENSPREG00000006473	chd9	98	67.939	ENSCLAG00000007137	CHD9	99	77.146	Chinchilla_lanigera
ENSPREG00000006473	chd9	67	74.732	ENSCSAG00000005311	CHD9	84	71.300	Chlorocebus_sabaeus
ENSPREG00000006473	chd9	70	91.406	ENSCHOG00000003935	CHD9	58	91.361	Choloepus_hoffmanni
ENSPREG00000006473	chd9	90	81.939	ENSCPBG00000012459	CHD9	84	79.126	Chrysemys_picta_bellii
ENSPREG00000006473	chd9	92	66.551	ENSCANG00000030349	CHD9	91	69.965	Colobus_angolensis_palliatus
ENSPREG00000006473	chd9	98	67.900	ENSCGRG00001016150	Chd9	79	70.740	Cricetulus_griseus_chok1gshd
ENSPREG00000006473	chd9	98	67.900	ENSCGRG00000012850	Chd9	99	77.434	Cricetulus_griseus_crigri
ENSPREG00000006473	chd9	96	86.395	ENSCSEG00000009209	chd9	96	84.825	Cynoglossus_semilaevis
ENSPREG00000006473	chd9	97	92.718	ENSCVAG00000016195	chd9	99	88.537	Cyprinodon_variegatus
ENSPREG00000006473	chd9	99	75.719	ENSDARG00000074498	chd9	97	76.683	Danio_rerio
ENSPREG00000006473	chd9	95	69.082	ENSDNOG00000006045	CHD9	96	71.691	Dasypus_novemcinctus
ENSPREG00000006473	chd9	81	69.444	ENSDORG00000008523	-	96	71.407	Dipodomys_ordii
ENSPREG00000006473	chd9	88	92.063	ENSETEG00000009565	CHD9	76	91.935	Echinops_telfairi
ENSPREG00000006473	chd9	98	68.029	ENSEASG00005014832	CHD9	96	78.270	Equus_asinus_asinus
ENSPREG00000006473	chd9	95	69.814	ENSECAG00000011505	CHD9	84	71.325	Equus_caballus
ENSPREG00000006473	chd9	81	86.522	ENSEEUG00000014515	CHD9	72	84.530	Erinaceus_europaeus
ENSPREG00000006473	chd9	99	77.585	ENSELUG00000006031	chd9	97	78.915	Esox_lucius
ENSPREG00000006473	chd9	98	68.101	ENSFCAG00000022534	CHD9	91	70.318	Felis_catus
ENSPREG00000006473	chd9	99	68.290	ENSFALG00000013276	CHD9	97	69.666	Ficedula_albicollis
ENSPREG00000006473	chd9	98	67.830	ENSFDAG00000021037	CHD9	85	70.566	Fukomys_damarensis
ENSPREG00000006473	chd9	99	94.453	ENSFHEG00000006068	chd9	99	93.968	Fundulus_heteroclitus
ENSPREG00000006473	chd9	79	86.780	ENSGMOG00000006040	chd9	83	86.540	Gadus_morhua
ENSPREG00000006473	chd9	93	70.867	ENSGALG00000039178	CHD9	81	72.072	Gallus_gallus
ENSPREG00000006473	chd9	100	98.432	ENSGAFG00000010014	chd9	100	98.432	Gambusia_affinis
ENSPREG00000006473	chd9	95	69.196	ENSGGOG00000014816	CHD9	93	69.611	Gorilla_gorilla
ENSPREG00000006473	chd9	99	86.104	ENSHBUG00000023322	chd9	96	88.388	Haplochromis_burtoni
ENSPREG00000006473	chd9	94	69.314	ENSHGLG00000014938	CHD9	96	80.262	Heterocephalus_glaber_female
ENSPREG00000006473	chd9	96	82.143	ENSHCOG00000000937	chd9	97	82.199	Hippocampus_comes
ENSPREG00000006473	chd9	99	76.426	ENSIPUG00000016448	chd9	96	78.302	Ictalurus_punctatus
ENSPREG00000006473	chd9	97	68.801	ENSSTOG00000022273	CHD9	99	76.744	Ictidomys_tridecemlineatus
ENSPREG00000006473	chd9	79	70.829	ENSJJAG00000015741	-	96	71.436	Jaculus_jaculus
ENSPREG00000006473	chd9	96	90.352	ENSKMAG00000016784	chd9	96	91.022	Kryptolebias_marmoratus
ENSPREG00000006473	chd9	96	88.976	ENSLBEG00000012077	chd9	96	89.293	Labrus_bergylta
ENSPREG00000006473	chd9	95	66.282	ENSLACG00000005557	CHD9	84	67.148	Latimeria_chalumnae
ENSPREG00000006473	chd9	99	75.730	ENSLOCG00000007225	chd9	98	76.309	Lepisosteus_oculatus
ENSPREG00000006473	chd9	89	66.718	ENSLAFG00000015374	CHD9	84	70.146	Loxodonta_africana
ENSPREG00000006473	chd9	94	69.366	ENSMFAG00000041354	CHD9	94	71.454	Macaca_fascicularis
ENSPREG00000006473	chd9	67	74.791	ENSMMUG00000016310	CHD9	91	69.965	Macaca_mulatta
ENSPREG00000006473	chd9	85	70.944	ENSMNEG00000031494	CHD9	85	72.826	Macaca_nemestrina
ENSPREG00000006473	chd9	67	74.791	ENSMLEG00000043219	CHD9	91	69.965	Mandrillus_leucophaeus
ENSPREG00000006473	chd9	99	88.768	ENSMAMG00000003909	chd9	97	84.432	Mastacembelus_armatus
ENSPREG00000006473	chd9	99	88.474	ENSMZEG00005006581	chd9	97	89.793	Maylandia_zebra
ENSPREG00000006473	chd9	98	64.286	ENSMGAG00000004642	CHD9	59	72.733	Meleagris_gallopavo
ENSPREG00000006473	chd9	98	68.664	ENSMICG00000016679	CHD9	91	70.318	Microcebus_murinus
ENSPREG00000006473	chd9	97	83.695	ENSMMOG00000016406	chd9	97	79.371	Mola_mola
ENSPREG00000006473	chd9	86	75.618	ENSMODG00000013142	-	96	77.383	Monodelphis_domestica
ENSPREG00000006473	chd9	97	85.609	ENSMALG00000013306	chd9	97	81.116	Monopterus_albus
ENSPREG00000006473	chd9	95	69.186	MGP_CAROLIEiJ_G0031364	Chd9	79	71.120	Mus_caroli
ENSPREG00000006473	chd9	95	69.311	ENSMUSG00000056608	Chd9	99	76.217	Mus_musculus
ENSPREG00000006473	chd9	98	67.086	MGP_PahariEiJ_G0022964	Chd9	84	68.890	Mus_pahari
ENSPREG00000006473	chd9	98	67.664	MGP_SPRETEiJ_G0032483	Chd9	79	70.817	Mus_spretus
ENSPREG00000006473	chd9	98	68.167	ENSMPUG00000003285	CHD9	84	71.814	Mustela_putorius_furo
ENSPREG00000006473	chd9	98	67.818	ENSMLUG00000004456	CHD9	84	70.029	Myotis_lucifugus
ENSPREG00000006473	chd9	99	89.244	ENSNBRG00000009423	chd9	97	90.391	Neolamprologus_brichardi
ENSPREG00000006473	chd9	85	70.956	ENSNLEG00000001026	CHD9	85	72.997	Nomascus_leucogenys
ENSPREG00000006473	chd9	73	93.985	ENSMEUG00000008222	-	74	91.083	Notamacropus_eugenii
ENSPREG00000006473	chd9	78	94.737	ENSOPRG00000011168	CHD9	70	86.197	Ochotona_princeps
ENSPREG00000006473	chd9	98	67.900	ENSODEG00000004466	CHD9	84	70.903	Octodon_degus
ENSPREG00000006473	chd9	97	87.823	ENSONIG00000002816	chd9	96	89.992	Oreochromis_niloticus
ENSPREG00000006473	chd9	67	75.741	ENSOANG00000013401	CHD9	79	71.819	Ornithorhynchus_anatinus
ENSPREG00000006473	chd9	99	67.527	ENSOCUG00000001016	CHD9	94	71.588	Oryctolagus_cuniculus
ENSPREG00000006473	chd9	97	87.582	ENSORLG00000013810	chd9	96	86.002	Oryzias_latipes
ENSPREG00000006473	chd9	97	83.004	ENSORLG00020020665	chd9	97	79.666	Oryzias_latipes_hni
ENSPREG00000006473	chd9	97	88.095	ENSORLG00015019126	chd9	96	88.651	Oryzias_latipes_hsok
ENSPREG00000006473	chd9	55	90.803	ENSOMEG00000015978	chd9	99	79.447	Oryzias_melastigma
ENSPREG00000006473	chd9	98	68.034	ENSOGAG00000002110	CHD9	84	70.635	Otolemur_garnettii
ENSPREG00000006473	chd9	98	67.631	ENSOARG00000017664	CHD9	84	70.566	Ovis_aries
ENSPREG00000006473	chd9	95	68.375	ENSPPAG00000039388	-	96	70.641	Pan_paniscus
ENSPREG00000006473	chd9	98	68.182	ENSPPRG00000004801	CHD9	91	69.965	Panthera_pardus
ENSPREG00000006473	chd9	98	67.056	ENSPTIG00000021854	CHD9	84	70.483	Panthera_tigris_altaica
ENSPREG00000006473	chd9	97	61.063	ENSPTRG00000008113	CHD9	93	69.611	Pan_troglodytes
ENSPREG00000006473	chd9	99	67.540	ENSPANG00000019307	CHD9	95	71.190	Papio_anubis
ENSPREG00000006473	chd9	97	70.016	ENSPKIG00000025401	-	90	67.067	Paramormyrops_kingsleyae
ENSPREG00000006473	chd9	97	77.353	ENSPKIG00000021876	chd9	96	78.792	Paramormyrops_kingsleyae
ENSPREG00000006473	chd9	56	76.846	ENSPSIG00000008099	CHD9	71	78.698	Pelodiscus_sinensis
ENSPREG00000006473	chd9	85	69.972	ENSPCIG00000017215	CHD9	95	75.581	Phascolarctos_cinereus
ENSPREG00000006473	chd9	100	98.270	ENSPFOG00000015839	chd9	100	98.270	Poecilia_formosa
ENSPREG00000006473	chd9	100	98.170	ENSPLAG00000011118	chd9	100	98.170	Poecilia_latipinna
ENSPREG00000006473	chd9	100	96.437	ENSPMEG00000015106	chd9	100	96.437	Poecilia_mexicana
ENSPREG00000006473	chd9	89	67.535	ENSPPYG00000007348	CHD9	85	71.168	Pongo_abelii
ENSPREG00000006473	chd9	68	80.219	ENSPCAG00000007564	CHD9	74	82.298	Procavia_capensis
ENSPREG00000006473	chd9	98	66.412	ENSPCOG00000028433	CHD9	91	69.258	Propithecus_coquereli
ENSPREG00000006473	chd9	87	68.515	ENSPVAG00000015617	CHD9	81	74.142	Pteropus_vampyrus
ENSPREG00000006473	chd9	99	88.273	ENSPNYG00000010947	chd9	97	89.050	Pundamilia_nyererei
ENSPREG00000006473	chd9	96	77.778	ENSPNAG00000024141	chd9	97	77.737	Pygocentrus_nattereri
ENSPREG00000006473	chd9	86	67.240	ENSRNOG00000049302	Chd9	94	58.703	Rattus_norvegicus
ENSPREG00000006473	chd9	98	68.101	ENSRBIG00000035553	CHD9	95	71.202	Rhinopithecus_bieti
ENSPREG00000006473	chd9	96	68.964	ENSRROG00000033278	CHD9	96	71.331	Rhinopithecus_roxellana
ENSPREG00000006473	chd9	95	69.104	ENSSBOG00000030240	CHD9	93	69.258	Saimiri_boliviensis_boliviensis
ENSPREG00000006473	chd9	98	67.834	ENSSHAG00000002719	CHD9	79	71.398	Sarcophilus_harrisii
ENSPREG00000006473	chd9	95	78.458	ENSSFOG00015020209	chd9	97	78.145	Scleropages_formosus
ENSPREG00000006473	chd9	99	72.342	ENSSFOG00015001327	chd9	96	73.820	Scleropages_formosus
ENSPREG00000006473	chd9	96	89.719	ENSSMAG00000008953	chd9	97	90.132	Scophthalmus_maximus
ENSPREG00000006473	chd9	99	89.964	ENSSDUG00000006139	chd9	96	90.973	Seriola_dumerili
ENSPREG00000006473	chd9	99	89.349	ENSSLDG00000017818	chd9	96	90.702	Seriola_lalandi_dorsalis
ENSPREG00000006473	chd9	71	77.871	ENSSARG00000010632	CHD9	55	77.926	Sorex_araneus
ENSPREG00000006473	chd9	99	89.908	ENSSPAG00000021649	chd9	97	91.432	Stegastes_partitus
ENSPREG00000006473	chd9	99	60.067	ENSSSCG00000033591	CHD9	61	76.153	Sus_scrofa
ENSPREG00000006473	chd9	86	71.715	ENSTGUG00000007476	CHD9	86	73.509	Taeniopygia_guttata
ENSPREG00000006473	chd9	99	84.262	ENSTRUG00000009125	chd9	99	77.952	Takifugu_rubripes
ENSPREG00000006473	chd9	67	84.906	ENSTNIG00000003825	chd9	84	98.817	Tetraodon_nigroviridis
ENSPREG00000006473	chd9	59	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSPREG00000006473	chd9	84	70.816	ENSTTRG00000012674	CHD9	77	71.718	Tursiops_truncatus
ENSPREG00000006473	chd9	76	66.893	ENSUAMG00000022706	CHD9	95	69.524	Ursus_americanus
ENSPREG00000006473	chd9	75	85.998	ENSUMAG00000004043	CHD9	95	86.268	Ursus_maritimus
ENSPREG00000006473	chd9	97	67.854	ENSVPAG00000001374	CHD9	81	70.431	Vicugna_pacos
ENSPREG00000006473	chd9	98	68.343	ENSVVUG00000019435	CHD9	84	72.070	Vulpes_vulpes
ENSPREG00000006473	chd9	93	68.821	ENSXETG00000000349	chd9	77	76.225	Xenopus_tropicalis
ENSPREG00000006473	chd9	99	96.433	ENSXCOG00000012997	chd9	99	97.075	Xiphophorus_couchianus
ENSPREG00000006473	chd9	100	98.370	ENSXMAG00000016192	chd9	100	98.854	Xiphophorus_maculatus