EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006692 (Gene tree)
Gene ID: 103473586
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 55571 bases
Position: chrLG12:13164866-13220436
Accession: 103473586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009835	DRY_EERY	PF09750.9	3.9e-32	1	1
ENSPREP00000009852	DRY_EERY	PF09750.9	2.6e-14	1	1
ENSPREP00000009852	Surp	PF01805.20	9.7e-29	1	2
ENSPREP00000009852	Surp	PF01805.20	9.7e-29	2	2
ENSPREP00000009835	Surp	PF01805.20	1.1e-28	1	2
ENSPREP00000009835	Surp	PF01805.20	1.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000009968	-	2740	XM_008423923	ENSPREP00000009852	890 (aa)	XP_008422145	UPI0004A44268
ENSPRET00000009951	-	2799	XM_008423922	ENSPREP00000009835	932 (aa)	XP_008422144	UPI0004A32F98

Gene Model

Click here to download ENSPREG00000006692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006692	sfswap	51	67.480	ENSG00000061936	SFSWAP	67	80.247	Homo_sapiens
ENSPREG00000006692	sfswap	82	95.652	ENSAPOG00000005784	sfswap	93	95.652	Acanthochromis_polyacanthus
ENSPREG00000006692	sfswap	99	50.422	ENSAMEG00000013818	SFSWAP	82	58.345	Ailuropoda_melanoleuca
ENSPREG00000006692	sfswap	77	81.215	ENSAOCG00000016469	sfswap	77	80.785	Amphiprion_ocellaris
ENSPREG00000006692	sfswap	77	80.939	ENSAPEG00000004965	sfswap	77	80.514	Amphiprion_percula
ENSPREG00000006692	sfswap	79	79.195	ENSATEG00000021053	sfswap	97	73.278	Anabas_testudineus
ENSPREG00000006692	sfswap	98	49.110	ENSACAG00000007220	SFSWAP	72	58.673	Anolis_carolinensis
ENSPREG00000006692	sfswap	99	51.600	ENSANAG00000001518	SFSWAP	84	58.060	Aotus_nancymaae
ENSPREG00000006692	sfswap	79	79.487	ENSACLG00000020159	sfswap	81	79.459	Astatotilapia_calliptera
ENSPREG00000006692	sfswap	72	64.820	ENSAMXG00000008657	sfswap	72	65.590	Astyanax_mexicanus
ENSPREG00000006692	sfswap	84	58.791	ENSBTAG00000000439	SFSWAP	82	58.702	Bos_taurus
ENSPREG00000006692	sfswap	99	51.800	ENSCJAG00000003613	SFSWAP	78	58.140	Callithrix_jacchus
ENSPREG00000006692	sfswap	97	53.388	ENSCAFG00000006625	SFSWAP	82	58.683	Canis_familiaris
ENSPREG00000006692	sfswap	91	48.524	ENSCAFG00020011254	SFSWAP	71	52.308	Canis_lupus_dingo
ENSPREG00000006692	sfswap	84	58.597	ENSCHIG00000008838	SFSWAP	82	58.506	Capra_hircus
ENSPREG00000006692	sfswap	89	66.125	ENSTSYG00000010303	SFSWAP	86	57.353	Carlito_syrichta
ENSPREG00000006692	sfswap	89	67.385	ENSCCAG00000037255	SFSWAP	80	60.029	Cebus_capucinus
ENSPREG00000006692	sfswap	99	50.649	ENSCATG00000031094	SFSWAP	75	58.767	Cercocebus_atys
ENSPREG00000006692	sfswap	94	62.469	ENSCLAG00000008380	SFSWAP	75	58.219	Chinchilla_lanigera
ENSPREG00000006692	sfswap	79	66.038	ENSCHOG00000003578	SFSWAP	71	72.881	Choloepus_hoffmanni
ENSPREG00000006692	sfswap	97	54.657	ENSCPBG00000024757	SFSWAP	81	58.543	Chrysemys_picta_bellii
ENSPREG00000006692	sfswap	92	62.344	ENSCGRG00001011284	Sfswap	84	58.493	Cricetulus_griseus_chok1gshd
ENSPREG00000006692	sfswap	78	73.954	ENSCSEG00000003773	sfswap	77	73.677	Cynoglossus_semilaevis
ENSPREG00000006692	sfswap	50	83.259	ENSCVAG00000001205	-	97	80.273	Cyprinodon_variegatus
ENSPREG00000006692	sfswap	72	67.877	ENSDARG00000005980	sfswap	73	68.990	Danio_rerio
ENSPREG00000006692	sfswap	74	61.340	ENSDNOG00000018742	SFSWAP	79	60.058	Dasypus_novemcinctus
ENSPREG00000006692	sfswap	97	47.831	ENSDORG00000010352	Sfswap	72	52.798	Dipodomys_ordii
ENSPREG00000006692	sfswap	57	100.000	ENSETEG00000016657	-	60	100.000	Echinops_telfairi
ENSPREG00000006692	sfswap	59	39.422	ENSEBUG00000016748	SFSWAP	72	37.761	Eptatretus_burgeri
ENSPREG00000006692	sfswap	97	52.107	ENSEASG00005016502	SFSWAP	82	58.717	Equus_asinus_asinus
ENSPREG00000006692	sfswap	95	51.515	ENSECAG00000007657	SFSWAP	82	58.717	Equus_caballus
ENSPREG00000006692	sfswap	88	48.649	ENSEEUG00000001713	SFSWAP	76	47.352	Erinaceus_europaeus
ENSPREG00000006692	sfswap	100	60.079	ENSELUG00000010942	sfswap	94	63.556	Esox_lucius
ENSPREG00000006692	sfswap	97	53.320	ENSFCAG00000010778	SFSWAP	74	58.726	Felis_catus
ENSPREG00000006692	sfswap	69	59.007	ENSFALG00000009577	SFSWAP	71	59.859	Ficedula_albicollis
ENSPREG00000006692	sfswap	99	52.789	ENSFDAG00000017235	SFSWAP	75	58.311	Fukomys_damarensis
ENSPREG00000006692	sfswap	50	82.192	ENSGMOG00000009205	sfswap	52	82.192	Gadus_morhua
ENSPREG00000006692	sfswap	100	95.601	ENSGAFG00000006272	sfswap	100	95.601	Gambusia_affinis
ENSPREG00000006692	sfswap	80	67.971	ENSGACG00000017647	sfswap	79	64.765	Gasterosteus_aculeatus
ENSPREG00000006692	sfswap	97	54.964	ENSGAGG00000002611	SFSWAP	81	58.403	Gopherus_agassizii
ENSPREG00000006692	sfswap	65	63.433	ENSGGOG00000014877	SFSWAP	84	58.082	Gorilla_gorilla
ENSPREG00000006692	sfswap	79	79.515	ENSHBUG00000005629	sfswap	76	79.487	Haplochromis_burtoni
ENSPREG00000006692	sfswap	94	62.469	ENSHGLG00000019216	SFSWAP	75	58.904	Heterocephalus_glaber_female
ENSPREG00000006692	sfswap	94	62.469	ENSHGLG00100019350	SFSWAP	75	58.767	Heterocephalus_glaber_male
ENSPREG00000006692	sfswap	77	73.333	ENSHCOG00000009475	sfswap	100	68.482	Hippocampus_comes
ENSPREG00000006692	sfswap	71	68.201	ENSIPUG00000010598	sfswap	74	68.182	Ictalurus_punctatus
ENSPREG00000006692	sfswap	92	62.470	ENSSTOG00000000773	SFSWAP	75	58.436	Ictidomys_tridecemlineatus
ENSPREG00000006692	sfswap	99	52.854	ENSJJAG00000006609	Sfswap	71	60.143	Jaculus_jaculus
ENSPREG00000006692	sfswap	77	81.431	ENSKMAG00000013168	sfswap	77	81.989	Kryptolebias_marmoratus
ENSPREG00000006692	sfswap	77	77.210	ENSLBEG00000010239	sfswap	78	77.983	Labrus_bergylta
ENSPREG00000006692	sfswap	70	59.344	ENSLACG00000018678	SFSWAP	71	57.835	Latimeria_chalumnae
ENSPREG00000006692	sfswap	100	56.579	ENSLOCG00000006202	sfswap	72	63.649	Lepisosteus_oculatus
ENSPREG00000006692	sfswap	98	52.497	ENSMFAG00000037352	SFSWAP	65	58.493	Macaca_fascicularis
ENSPREG00000006692	sfswap	99	53.200	ENSMMUG00000020343	SFSWAP	75	58.960	Macaca_mulatta
ENSPREG00000006692	sfswap	99	53.200	ENSMNEG00000041002	SFSWAP	75	58.960	Macaca_nemestrina
ENSPREG00000006692	sfswap	100	77.028	ENSMAMG00000006631	sfswap	100	76.866	Mastacembelus_armatus
ENSPREG00000006692	sfswap	79	79.487	ENSMZEG00005017834	SFSWAP	77	79.459	Maylandia_zebra
ENSPREG00000006692	sfswap	90	64.620	ENSMICG00000004465	SFSWAP	87	56.653	Microcebus_murinus
ENSPREG00000006692	sfswap	85	61.468	ENSMODG00000015581	SFSWAP	67	53.499	Monodelphis_domestica
ENSPREG00000006692	sfswap	77	77.442	ENSMALG00000012603	sfswap	100	70.445	Monopterus_albus
ENSPREG00000006692	sfswap	90	64.327	MGP_CAROLIEiJ_G0027780	Sfswap	94	60.526	Mus_caroli
ENSPREG00000006692	sfswap	92	62.935	ENSMUSG00000029439	Sfswap	94	60.526	Mus_musculus
ENSPREG00000006692	sfswap	90	64.327	MGP_PahariEiJ_G0024360	Sfswap	94	60.526	Mus_pahari
ENSPREG00000006692	sfswap	53	47.985	MGP_SPRETEiJ_G0028779	Sfswap	94	60.526	Mus_spretus
ENSPREG00000006692	sfswap	97	52.881	ENSMPUG00000002218	SFSWAP	74	58.414	Mustela_putorius_furo
ENSPREG00000006692	sfswap	72	56.868	ENSMLUG00000011296	SFSWAP	77	58.611	Myotis_lucifugus
ENSPREG00000006692	sfswap	100	52.320	ENSNGAG00000018167	Sfswap	93	49.947	Nannospalax_galili
ENSPREG00000006692	sfswap	74	79.123	ENSNBRG00000020857	sfswap	76	78.686	Neolamprologus_brichardi
ENSPREG00000006692	sfswap	98	50.813	ENSNLEG00000008386	SFSWAP	76	58.197	Nomascus_leucogenys
ENSPREG00000006692	sfswap	62	62.943	ENSOPRG00000006983	-	72	63.750	Ochotona_princeps
ENSPREG00000006692	sfswap	92	64.058	ENSODEG00000008020	SFSWAP	75	58.447	Octodon_degus
ENSPREG00000006692	sfswap	89	72.962	ENSONIG00000003757	sfswap	89	72.281	Oreochromis_niloticus
ENSPREG00000006692	sfswap	60	66.667	ENSOANG00000013861	SFSWAP	74	59.070	Ornithorhynchus_anatinus
ENSPREG00000006692	sfswap	66	61.386	ENSOCUG00000002165	SFSWAP	76	55.541	Oryctolagus_cuniculus
ENSPREG00000006692	sfswap	77	77.641	ENSORLG00000010983	sfswap	100	75.684	Oryzias_latipes
ENSPREG00000006692	sfswap	77	77.641	ENSORLG00020010779	sfswap	100	75.315	Oryzias_latipes_hni
ENSPREG00000006692	sfswap	77	78.082	ENSORLG00015023093	sfswap	100	75.869	Oryzias_latipes_hsok
ENSPREG00000006692	sfswap	77	78.194	ENSOMEG00000022065	sfswap	94	73.401	Oryzias_melastigma
ENSPREG00000006692	sfswap	83	62.624	ENSOGAG00000016724	SFSWAP	86	57.124	Otolemur_garnettii
ENSPREG00000006692	sfswap	72	58.597	ENSOARG00000014314	SFSWAP	83	58.506	Ovis_aries
ENSPREG00000006692	sfswap	89	67.297	ENSPPAG00000036706	SFSWAP	80	59.971	Pan_paniscus
ENSPREG00000006692	sfswap	97	51.616	ENSPPRG00000017318	SFSWAP	80	60.057	Panthera_pardus
ENSPREG00000006692	sfswap	89	66.758	ENSPTIG00000004304	SFSWAP	69	66.942	Panthera_tigris_altaica
ENSPREG00000006692	sfswap	89	67.297	ENSPTRG00000005640	SFSWAP	82	58.856	Pan_troglodytes
ENSPREG00000006692	sfswap	99	50.649	ENSPANG00000019737	SFSWAP	75	58.767	Papio_anubis
ENSPREG00000006692	sfswap	71	64.783	ENSPKIG00000008327	sfswap	73	65.050	Paramormyrops_kingsleyae
ENSPREG00000006692	sfswap	53	49.171	ENSPSIG00000017807	SFSWAP	73	52.603	Pelodiscus_sinensis
ENSPREG00000006692	sfswap	90	64.035	ENSPEMG00000001237	Sfswap	75	58.607	Peromyscus_maniculatus_bairdii
ENSPREG00000006692	sfswap	99	47.817	ENSPCIG00000006062	SFSWAP	77	58.540	Phascolarctos_cinereus
ENSPREG00000006692	sfswap	100	98.176	ENSPFOG00000019657	sfswap	100	98.176	Poecilia_formosa
ENSPREG00000006692	sfswap	100	97.854	ENSPLAG00000008513	sfswap	100	97.854	Poecilia_latipinna
ENSPREG00000006692	sfswap	100	97.854	ENSPMEG00000008716	sfswap	100	97.854	Poecilia_mexicana
ENSPREG00000006692	sfswap	90	65.205	ENSPPYG00000005129	SFSWAP	76	58.082	Pongo_abelii
ENSPREG00000006692	sfswap	52	61.895	ENSPCAG00000004977	-	56	60.729	Procavia_capensis
ENSPREG00000006692	sfswap	92	62.935	ENSPCOG00000023786	SFSWAP	87	56.373	Propithecus_coquereli
ENSPREG00000006692	sfswap	75	63.673	ENSPNAG00000007073	sfswap	75	65.405	Pygocentrus_nattereri
ENSPREG00000006692	sfswap	53	44.483	ENSRNOG00000000931	Sfswap	98	45.455	Rattus_norvegicus
ENSPREG00000006692	sfswap	99	52.124	ENSRBIG00000036330	SFSWAP	73	58.477	Rhinopithecus_bieti
ENSPREG00000006692	sfswap	92	63.433	ENSRROG00000032001	SFSWAP	84	58.082	Rhinopithecus_roxellana
ENSPREG00000006692	sfswap	92	63.119	ENSSBOG00000026217	SFSWAP	84	58.470	Saimiri_boliviensis_boliviensis
ENSPREG00000006692	sfswap	97	50.318	ENSSHAG00000014232	SFSWAP	72	58.589	Sarcophilus_harrisii
ENSPREG00000006692	sfswap	69	65.789	ENSSFOG00015000766	sfswap	70	65.449	Scleropages_formosus
ENSPREG00000006692	sfswap	77	78.065	ENSSMAG00000018718	sfswap	76	77.279	Scophthalmus_maximus
ENSPREG00000006692	sfswap	75	67.188	ENSSARG00000000424	SFSWAP	84	59.909	Sorex_araneus
ENSPREG00000006692	sfswap	63	53.947	ENSSPUG00000010272	SFSWAP	70	56.033	Sphenodon_punctatus
ENSPREG00000006692	sfswap	76	80.559	ENSSPAG00000014310	sfswap	79	79.570	Stegastes_partitus
ENSPREG00000006692	sfswap	72	57.660	ENSSSCG00000009744	SFSWAP	76	58.121	Sus_scrofa
ENSPREG00000006692	sfswap	98	52.798	ENSTGUG00000004623	SFSWAP	74	60.340	Taeniopygia_guttata
ENSPREG00000006692	sfswap	53	72.662	ENSTBEG00000004983	-	52	72.662	Tupaia_belangeri
ENSPREG00000006692	sfswap	76	66.053	ENSTTRG00000013478	SFSWAP	73	53.547	Tursiops_truncatus
ENSPREG00000006692	sfswap	89	66.580	ENSUAMG00000016807	SFSWAP	79	60.882	Ursus_americanus
ENSPREG00000006692	sfswap	75	67.232	ENSUMAG00000002957	SFSWAP	75	52.867	Ursus_maritimus
ENSPREG00000006692	sfswap	97	53.388	ENSVVUG00000010753	SFSWAP	74	58.298	Vulpes_vulpes
ENSPREG00000006692	sfswap	84	56.547	ENSXETG00000009350	sfswap	88	57.787	Xenopus_tropicalis
ENSPREG00000006692	sfswap	100	96.404	ENSXMAG00000009020	sfswap	100	96.404	Xiphophorus_maculatus