EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006719 (Gene tree)
Gene ID: 103479723
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 10238 bases
Position: chrLG17:20213296-20223533
Accession: 103479723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009860	efThoc1	PF11957.8	6e-143	1	1
ENSPREP00000009891	efThoc1	PF11957.8	6.1e-143	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010007	-	1898	-	ENSPREP00000009891	622 (aa)	-	-
ENSPRET00000009976	-	5610	XM_008434318	ENSPREP00000009860	654 (aa)	XP_008432540	UPI0004A25D5F

Gene Model

Click here to download ENSPREG00000006719's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006719	thoc1	99	71.933	ENSG00000079134	THOC1	99	78.676	Homo_sapiens
ENSPREG00000006719	thoc1	99	72.239	ENSAMEG00000006645	THOC1	98	72.239	Ailuropoda_melanoleuca
ENSPREG00000006719	thoc1	94	88.925	ENSACIG00000019392	thoc1	95	88.925	Amphilophus_citrinellus
ENSPREG00000006719	thoc1	100	86.239	ENSAOCG00000008391	thoc1	100	86.239	Amphiprion_ocellaris
ENSPREG00000006719	thoc1	100	91.437	ENSAPEG00000001093	thoc1	100	91.437	Amphiprion_percula
ENSPREG00000006719	thoc1	100	90.061	ENSATEG00000004783	thoc1	100	90.061	Anabas_testudineus
ENSPREG00000006719	thoc1	98	71.517	ENSAPLG00000016149	THOC1	97	71.517	Anas_platyrhynchos
ENSPREG00000006719	thoc1	99	71.101	ENSACAG00000008307	THOC1	96	70.489	Anolis_carolinensis
ENSPREG00000006719	thoc1	99	71.320	ENSANAG00000033200	THOC1	98	71.320	Aotus_nancymaae
ENSPREG00000006719	thoc1	100	89.755	ENSACLG00000016836	thoc1	100	89.755	Astatotilapia_calliptera
ENSPREG00000006719	thoc1	94	75.318	ENSAMXG00000014708	thoc1	98	74.641	Astyanax_mexicanus
ENSPREG00000006719	thoc1	99	72.239	ENSBTAG00000019215	THOC1	98	72.239	Bos_taurus
ENSPREG00000006719	thoc1	72	34.698	WBGene00020172	thoc-1	69	34.690	Caenorhabditis_elegans
ENSPREG00000006719	thoc1	99	72.086	ENSCJAG00000020450	THOC1	98	72.086	Callithrix_jacchus
ENSPREG00000006719	thoc1	99	72.239	ENSCAFG00000018324	THOC1	98	72.239	Canis_familiaris
ENSPREG00000006719	thoc1	99	72.239	ENSCAFG00020017894	THOC1	98	72.239	Canis_lupus_dingo
ENSPREG00000006719	thoc1	99	72.239	ENSCHIG00000015399	THOC1	98	73.270	Capra_hircus
ENSPREG00000006719	thoc1	99	71.933	ENSTSYG00000010585	THOC1	98	71.933	Carlito_syrichta
ENSPREG00000006719	thoc1	97	50.700	ENSCAPG00000016270	THOC1	97	50.700	Cavia_aperea
ENSPREG00000006719	thoc1	99	71.012	ENSCPOG00000000959	THOC1	98	71.012	Cavia_porcellus
ENSPREG00000006719	thoc1	99	72.086	ENSCCAG00000025766	THOC1	98	72.086	Cebus_capucinus
ENSPREG00000006719	thoc1	99	69.785	ENSCATG00000028180	THOC1	96	75.723	Cercocebus_atys
ENSPREG00000006719	thoc1	97	72.799	ENSCLAG00000009117	THOC1	99	72.799	Chinchilla_lanigera
ENSPREG00000006719	thoc1	99	72.086	ENSCSAG00000017631	THOC1	98	72.086	Chlorocebus_sabaeus
ENSPREG00000006719	thoc1	79	75.519	ENSCHOG00000010609	THOC1	78	75.519	Choloepus_hoffmanni
ENSPREG00000006719	thoc1	99	72.588	ENSCPBG00000027558	THOC1	99	72.588	Chrysemys_picta_bellii
ENSPREG00000006719	thoc1	77	46.465	ENSCING00000007663	-	99	46.479	Ciona_intestinalis
ENSPREG00000006719	thoc1	94	47.943	ENSCSAVG00000010649	-	100	47.943	Ciona_savignyi
ENSPREG00000006719	thoc1	99	71.933	ENSCANG00000034265	THOC1	96	76.093	Colobus_angolensis_palliatus
ENSPREG00000006719	thoc1	99	71.166	ENSCGRG00001016464	Thoc1	98	71.166	Cricetulus_griseus_chok1gshd
ENSPREG00000006719	thoc1	99	71.362	ENSCGRG00000010269	-	99	72.327	Cricetulus_griseus_crigri
ENSPREG00000006719	thoc1	90	59.864	ENSCGRG00000003390	-	97	59.864	Cricetulus_griseus_crigri
ENSPREG00000006719	thoc1	99	86.322	ENSCSEG00000012486	thoc1	99	87.781	Cynoglossus_semilaevis
ENSPREG00000006719	thoc1	100	92.966	ENSCVAG00000020600	thoc1	100	92.966	Cyprinodon_variegatus
ENSPREG00000006719	thoc1	100	81.985	ENSDARG00000088246	thoc1	100	81.985	Danio_rerio
ENSPREG00000006719	thoc1	99	72.043	ENSDNOG00000019217	THOC1	98	72.043	Dasypus_novemcinctus
ENSPREG00000006719	thoc1	97	68.239	ENSDORG00000008060	Thoc1	98	68.239	Dipodomys_ordii
ENSPREG00000006719	thoc1	98	37.249	FBgn0037382	Hpr1	74	42.182	Drosophila_melanogaster
ENSPREG00000006719	thoc1	90	56.351	ENSETEG00000004165	THOC1	98	55.102	Echinops_telfairi
ENSPREG00000006719	thoc1	92	63.123	ENSEBUG00000005998	thoc1	97	63.894	Eptatretus_burgeri
ENSPREG00000006719	thoc1	99	71.933	ENSEASG00005002549	THOC1	94	71.319	Equus_asinus_asinus
ENSPREG00000006719	thoc1	99	72.086	ENSECAG00000009267	THOC1	88	72.086	Equus_caballus
ENSPREG00000006719	thoc1	64	79.221	ENSEEUG00000012214	-	63	79.221	Erinaceus_europaeus
ENSPREG00000006719	thoc1	100	83.866	ENSELUG00000023277	thoc1	100	83.866	Esox_lucius
ENSPREG00000006719	thoc1	99	72.546	ENSFCAG00000022454	THOC1	85	72.546	Felis_catus
ENSPREG00000006719	thoc1	97	72.188	ENSFALG00000006205	THOC1	99	72.188	Ficedula_albicollis
ENSPREG00000006719	thoc1	98	71.894	ENSFDAG00000006842	THOC1	99	71.894	Fukomys_damarensis
ENSPREG00000006719	thoc1	100	93.119	ENSFHEG00000008841	thoc1	100	93.119	Fundulus_heteroclitus
ENSPREG00000006719	thoc1	99	85.736	ENSGMOG00000011486	thoc1	99	85.736	Gadus_morhua
ENSPREG00000006719	thoc1	99	71.516	ENSGALG00000014915	THOC1	99	70.651	Gallus_gallus
ENSPREG00000006719	thoc1	100	98.318	ENSGAFG00000021464	thoc1	100	98.318	Gambusia_affinis
ENSPREG00000006719	thoc1	100	88.379	ENSGACG00000017361	thoc1	100	88.379	Gasterosteus_aculeatus
ENSPREG00000006719	thoc1	99	72.894	ENSGAGG00000021230	-	97	72.894	Gopherus_agassizii
ENSPREG00000006719	thoc1	99	72.086	ENSGGOG00000003013	THOC1	98	72.086	Gorilla_gorilla
ENSPREG00000006719	thoc1	100	90.061	ENSHBUG00000009096	thoc1	100	90.061	Haplochromis_burtoni
ENSPREG00000006719	thoc1	99	71.626	ENSHGLG00000003712	-	98	71.626	Heterocephalus_glaber_female
ENSPREG00000006719	thoc1	78	59.259	ENSHGLG00000009264	-	98	60.671	Heterocephalus_glaber_female
ENSPREG00000006719	thoc1	99	71.472	ENSHGLG00100003570	THOC1	98	71.472	Heterocephalus_glaber_male
ENSPREG00000006719	thoc1	66	69.792	ENSHGLG00100002225	-	98	58.201	Heterocephalus_glaber_male
ENSPREG00000006719	thoc1	91	80.943	ENSIPUG00000005306	thoc1	100	79.811	Ictalurus_punctatus
ENSPREG00000006719	thoc1	99	72.086	ENSSTOG00000006484	THOC1	98	72.086	Ictidomys_tridecemlineatus
ENSPREG00000006719	thoc1	55	72.674	ENSJJAG00000014893	-	96	72.674	Jaculus_jaculus
ENSPREG00000006719	thoc1	100	91.437	ENSKMAG00000003904	thoc1	100	91.437	Kryptolebias_marmoratus
ENSPREG00000006719	thoc1	100	90.367	ENSLBEG00000020372	thoc1	98	90.367	Labrus_bergylta
ENSPREG00000006719	thoc1	99	72.894	ENSLACG00000014869	THOC1	99	72.588	Latimeria_chalumnae
ENSPREG00000006719	thoc1	100	81.126	ENSLOCG00000002097	thoc1	99	80.822	Lepisosteus_oculatus
ENSPREG00000006719	thoc1	99	72.086	ENSLAFG00000009585	THOC1	98	72.086	Loxodonta_africana
ENSPREG00000006719	thoc1	99	72.086	ENSMFAG00000041520	THOC1	98	72.086	Macaca_fascicularis
ENSPREG00000006719	thoc1	99	72.086	ENSMMUG00000004662	THOC1	98	72.086	Macaca_mulatta
ENSPREG00000006719	thoc1	99	72.086	ENSMNEG00000040177	THOC1	98	72.086	Macaca_nemestrina
ENSPREG00000006719	thoc1	99	72.086	ENSMLEG00000034201	THOC1	98	72.086	Mandrillus_leucophaeus
ENSPREG00000006719	thoc1	96	88.357	ENSMAMG00000016747	thoc1	100	88.357	Mastacembelus_armatus
ENSPREG00000006719	thoc1	100	89.755	ENSMZEG00005024609	thoc1	100	89.755	Maylandia_zebra
ENSPREG00000006719	thoc1	97	71.831	ENSMGAG00000009811	THOC1	99	71.831	Meleagris_gallopavo
ENSPREG00000006719	thoc1	99	70.706	ENSMAUG00000010272	Thoc1	98	70.706	Mesocricetus_auratus
ENSPREG00000006719	thoc1	99	72.239	ENSMICG00000027200	THOC1	98	72.239	Microcebus_murinus
ENSPREG00000006719	thoc1	99	62.348	ENSMOCG00000014924	-	96	61.738	Microtus_ochrogaster
ENSPREG00000006719	thoc1	99	70.245	ENSMOCG00000014536	-	85	70.245	Microtus_ochrogaster
ENSPREG00000006719	thoc1	93	90.033	ENSMMOG00000011772	thoc1	100	90.033	Mola_mola
ENSPREG00000006719	thoc1	99	71.125	ENSMODG00000021482	THOC1	98	71.125	Monodelphis_domestica
ENSPREG00000006719	thoc1	100	89.144	ENSMALG00000021872	thoc1	100	89.144	Monopterus_albus
ENSPREG00000006719	thoc1	99	70.706	MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	Mus_caroli
ENSPREG00000006719	thoc1	99	70.859	ENSMUSG00000024287	Thoc1	98	70.859	Mus_musculus
ENSPREG00000006719	thoc1	99	70.859	MGP_PahariEiJ_G0018726	Thoc1	98	70.859	Mus_pahari
ENSPREG00000006719	thoc1	99	70.859	MGP_SPRETEiJ_G0022905	Thoc1	98	70.859	Mus_spretus
ENSPREG00000006719	thoc1	99	72.239	ENSMPUG00000005448	THOC1	98	72.239	Mustela_putorius_furo
ENSPREG00000006719	thoc1	64	64.912	ENSMLUG00000024912	-	100	64.912	Myotis_lucifugus
ENSPREG00000006719	thoc1	99	71.012	ENSMLUG00000004090	-	98	71.012	Myotis_lucifugus
ENSPREG00000006719	thoc1	87	69.581	ENSMLUG00000027965	-	99	66.611	Myotis_lucifugus
ENSPREG00000006719	thoc1	99	71.472	ENSNGAG00000001401	-	98	71.472	Nannospalax_galili
ENSPREG00000006719	thoc1	97	57.300	ENSNGAG00000008061	-	97	57.300	Nannospalax_galili
ENSPREG00000006719	thoc1	97	87.912	ENSNBRG00000005991	thoc1	97	87.912	Neolamprologus_brichardi
ENSPREG00000006719	thoc1	99	72.086	ENSNLEG00000006835	THOC1	98	72.086	Nomascus_leucogenys
ENSPREG00000006719	thoc1	89	75.803	ENSMEUG00000009756	THOC1	82	75.803	Notamacropus_eugenii
ENSPREG00000006719	thoc1	99	57.515	ENSOPRG00000001108	THOC1	98	57.515	Ochotona_princeps
ENSPREG00000006719	thoc1	99	66.564	ENSODEG00000006623	THOC1	98	66.564	Octodon_degus
ENSPREG00000006719	thoc1	100	89.908	ENSONIG00000009440	thoc1	98	89.862	Oreochromis_niloticus
ENSPREG00000006719	thoc1	99	72.086	ENSOCUG00000011601	THOC1	98	72.086	Oryctolagus_cuniculus
ENSPREG00000006719	thoc1	100	89.908	ENSORLG00000017629	thoc1	100	89.908	Oryzias_latipes
ENSPREG00000006719	thoc1	100	90.061	ENSORLG00020007567	thoc1	100	90.061	Oryzias_latipes_hni
ENSPREG00000006719	thoc1	100	89.908	ENSORLG00015007356	thoc1	100	89.908	Oryzias_latipes_hsok
ENSPREG00000006719	thoc1	100	88.685	ENSOMEG00000008200	thoc1	100	88.532	Oryzias_melastigma
ENSPREG00000006719	thoc1	99	69.018	ENSOGAG00000000470	THOC1	98	69.018	Otolemur_garnettii
ENSPREG00000006719	thoc1	98	73.083	ENSOARG00000009238	THOC1	96	73.083	Ovis_aries
ENSPREG00000006719	thoc1	99	72.086	ENSPPAG00000031812	THOC1	98	72.086	Pan_paniscus
ENSPREG00000006719	thoc1	99	71.933	ENSPPRG00000023794	THOC1	96	76.301	Panthera_pardus
ENSPREG00000006719	thoc1	99	71.933	ENSPTIG00000007469	THOC1	96	76.301	Panthera_tigris_altaica
ENSPREG00000006719	thoc1	99	71.168	ENSPTRG00000009816	THOC1	98	71.168	Pan_troglodytes
ENSPREG00000006719	thoc1	99	71.189	ENSPANG00000008665	THOC1	98	71.189	Papio_anubis
ENSPREG00000006719	thoc1	100	81.832	ENSPKIG00000005906	thoc1	100	82.595	Paramormyrops_kingsleyae
ENSPREG00000006719	thoc1	81	75.379	ENSPSIG00000007691	THOC1	97	75.379	Pelodiscus_sinensis
ENSPREG00000006719	thoc1	96	83.016	ENSPMGG00000008279	thoc1	96	83.016	Periophthalmus_magnuspinnatus
ENSPREG00000006719	thoc1	99	70.706	ENSPEMG00000021789	Thoc1	98	70.706	Peromyscus_maniculatus_bairdii
ENSPREG00000006719	thoc1	74	71.837	ENSPCIG00000026942	THOC1	97	71.837	Phascolarctos_cinereus
ENSPREG00000006719	thoc1	100	98.318	ENSPFOG00000011673	thoc1	100	98.318	Poecilia_formosa
ENSPREG00000006719	thoc1	100	98.777	ENSPLAG00000019648	thoc1	100	98.777	Poecilia_latipinna
ENSPREG00000006719	thoc1	100	98.471	ENSPMEG00000007083	thoc1	100	98.471	Poecilia_mexicana
ENSPREG00000006719	thoc1	78	75.514	ENSPPYG00000009049	-	98	75.514	Pongo_abelii
ENSPREG00000006719	thoc1	91	73.499	ENSPCAG00000005320	THOC1	91	73.499	Procavia_capensis
ENSPREG00000006719	thoc1	99	71.472	ENSPCOG00000009234	THOC1	98	71.472	Propithecus_coquereli
ENSPREG00000006719	thoc1	99	70.092	ENSPVAG00000004007	THOC1	98	70.092	Pteropus_vampyrus
ENSPREG00000006719	thoc1	100	90.061	ENSPNYG00000019152	thoc1	100	90.061	Pundamilia_nyererei
ENSPREG00000006719	thoc1	100	81.804	ENSPNAG00000023390	thoc1	99	81.623	Pygocentrus_nattereri
ENSPREG00000006719	thoc1	81	58.065	ENSRNOG00000015332	Thoc1	94	58.065	Rattus_norvegicus
ENSPREG00000006719	thoc1	99	71.320	ENSRBIG00000033738	THOC1	99	73.830	Rhinopithecus_bieti
ENSPREG00000006719	thoc1	99	72.086	ENSRROG00000044988	THOC1	96	76.093	Rhinopithecus_roxellana
ENSPREG00000006719	thoc1	99	71.779	ENSSBOG00000016556	THOC1	98	71.779	Saimiri_boliviensis_boliviensis
ENSPREG00000006719	thoc1	99	71.933	ENSSHAG00000014829	THOC1	98	71.933	Sarcophilus_harrisii
ENSPREG00000006719	thoc1	100	84.709	ENSSFOG00015021527	thoc1	100	84.709	Scleropages_formosus
ENSPREG00000006719	thoc1	100	87.671	ENSSMAG00000018465	thoc1	99	87.671	Scophthalmus_maximus
ENSPREG00000006719	thoc1	100	90.520	ENSSDUG00000016810	thoc1	100	90.520	Seriola_dumerili
ENSPREG00000006719	thoc1	100	90.673	ENSSLDG00000015555	thoc1	100	90.673	Seriola_lalandi_dorsalis
ENSPREG00000006719	thoc1	87	71.429	ENSSARG00000006910	THOC1	86	71.429	Sorex_araneus
ENSPREG00000006719	thoc1	98	71.384	ENSSPUG00000007238	THOC1	98	71.077	Sphenodon_punctatus
ENSPREG00000006719	thoc1	100	86.738	ENSSPAG00000018847	thoc1	99	86.738	Stegastes_partitus
ENSPREG00000006719	thoc1	99	72.239	ENSSSCG00000025653	THOC1	93	72.239	Sus_scrofa
ENSPREG00000006719	thoc1	99	71.669	ENSTGUG00000010204	THOC1	99	71.669	Taeniopygia_guttata
ENSPREG00000006719	thoc1	100	88.226	ENSTRUG00000013518	thoc1	100	88.226	Takifugu_rubripes
ENSPREG00000006719	thoc1	100	87.156	ENSTNIG00000008473	thoc1	99	87.156	Tetraodon_nigroviridis
ENSPREG00000006719	thoc1	99	65.031	ENSTBEG00000016920	THOC1	98	65.031	Tupaia_belangeri
ENSPREG00000006719	thoc1	99	66.104	ENSTTRG00000016664	THOC1	98	66.104	Tursiops_truncatus
ENSPREG00000006719	thoc1	99	72.393	ENSUAMG00000002527	THOC1	98	72.457	Ursus_americanus
ENSPREG00000006719	thoc1	99	72.393	ENSUMAG00000019693	THOC1	98	72.393	Ursus_maritimus
ENSPREG00000006719	thoc1	67	65.145	ENSVPAG00000003726	-	66	65.145	Vicugna_pacos
ENSPREG00000006719	thoc1	99	72.239	ENSVVUG00000004384	THOC1	98	72.239	Vulpes_vulpes
ENSPREG00000006719	thoc1	99	70.213	ENSXETG00000003155	thoc1	97	70.213	Xenopus_tropicalis
ENSPREG00000006719	thoc1	96	91.054	ENSXCOG00000016085	thoc1	90	91.054	Xiphophorus_couchianus
ENSPREG00000006719	thoc1	100	98.318	ENSXMAG00000002353	thoc1	100	98.318	Xiphophorus_maculatus