EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006755 (Gene tree)
Gene ID: 103463711
Gene Symbol: si:ch73-63e15.2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 51461 bases
Position: chrLG4:21769164-21820624
Accession: 103463711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009920	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010036	-	4846	XM_008407247	ENSPREP00000009920	1575 (aa)	XP_008405469	UPI0004A4D472

Gene Model

Click here to download ENSPREG00000006755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006755	si:ch73-63e15.2	62	65.596	ENSPREG00000017746	sbno1	75	65.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006755	si:ch73-63e15.2	72	68.017	ENSG00000064932	SBNO2	87	68.229	Homo_sapiens
ENSPREG00000006755	si:ch73-63e15.2	100	78.768	ENSAPOG00000003185	si:ch73-63e15.2	93	86.605	Acanthochromis_polyacanthus
ENSPREG00000006755	si:ch73-63e15.2	100	79.327	ENSAOCG00000016581	si:ch73-63e15.2	98	83.636	Amphiprion_ocellaris
ENSPREG00000006755	si:ch73-63e15.2	100	79.266	ENSAPEG00000008862	si:ch73-63e15.2	100	79.486	Amphiprion_percula
ENSPREG00000006755	si:ch73-63e15.2	100	76.654	ENSATEG00000023838	si:ch73-63e15.2	99	83.333	Anabas_testudineus
ENSPREG00000006755	si:ch73-63e15.2	72	72.530	ENSAPLG00000007158	SBNO2	89	72.530	Anas_platyrhynchos
ENSPREG00000006755	si:ch73-63e15.2	78	64.635	ENSANAG00000026685	SBNO2	88	67.767	Aotus_nancymaae
ENSPREG00000006755	si:ch73-63e15.2	100	76.067	ENSACLG00000005090	si:ch73-63e15.2	100	76.223	Astatotilapia_calliptera
ENSPREG00000006755	si:ch73-63e15.2	80	76.183	ENSAMXG00000018868	sbno2a	97	79.403	Astyanax_mexicanus
ENSPREG00000006755	si:ch73-63e15.2	89	71.722	ENSAMXG00000015881	si:ch73-63e15.2	84	80.833	Astyanax_mexicanus
ENSPREG00000006755	si:ch73-63e15.2	78	66.375	ENSBTAG00000020780	SBNO2	88	69.810	Bos_taurus
ENSPREG00000006755	si:ch73-63e15.2	78	66.667	ENSCAFG00000019543	SBNO2	90	66.667	Canis_familiaris
ENSPREG00000006755	si:ch73-63e15.2	78	66.667	ENSCAFG00020017115	SBNO2	95	66.667	Canis_lupus_dingo
ENSPREG00000006755	si:ch73-63e15.2	78	66.295	ENSCHIG00000026127	SBNO2	90	66.481	Capra_hircus
ENSPREG00000006755	si:ch73-63e15.2	72	66.782	ENSCAPG00000005731	SBNO2	97	65.004	Cavia_aperea
ENSPREG00000006755	si:ch73-63e15.2	72	66.753	ENSCPOG00000007477	SBNO2	90	65.021	Cavia_porcellus
ENSPREG00000006755	si:ch73-63e15.2	72	67.708	ENSCCAG00000037518	SBNO2	88	67.708	Cebus_capucinus
ENSPREG00000006755	si:ch73-63e15.2	72	68.303	ENSCATG00000037046	SBNO2	87	68.229	Cercocebus_atys
ENSPREG00000006755	si:ch73-63e15.2	73	68.209	ENSCLAG00000010178	SBNO2	99	68.209	Chinchilla_lanigera
ENSPREG00000006755	si:ch73-63e15.2	72	68.303	ENSCSAG00000012317	SBNO2	90	65.113	Chlorocebus_sabaeus
ENSPREG00000006755	si:ch73-63e15.2	72	70.881	ENSCPBG00000008920	SBNO2	78	84.634	Chrysemys_picta_bellii
ENSPREG00000006755	si:ch73-63e15.2	68	68.297	ENSCANG00000036745	SBNO2	95	67.996	Colobus_angolensis_palliatus
ENSPREG00000006755	si:ch73-63e15.2	72	66.956	ENSCGRG00001023960	Sbno2	85	67.098	Cricetulus_griseus_chok1gshd
ENSPREG00000006755	si:ch73-63e15.2	72	68.284	ENSCGRG00000011984	Sbno2	85	68.421	Cricetulus_griseus_crigri
ENSPREG00000006755	si:ch73-63e15.2	75	84.357	ENSCSEG00000006856	si:ch73-63e15.2	96	88.073	Cynoglossus_semilaevis
ENSPREG00000006755	si:ch73-63e15.2	100	84.534	ENSCVAG00000005663	si:ch73-63e15.2	100	83.913	Cyprinodon_variegatus
ENSPREG00000006755	si:ch73-63e15.2	99	66.498	ENSDARG00000016188	SBNO2	98	67.048	Danio_rerio
ENSPREG00000006755	si:ch73-63e15.2	79	75.298	ENSDARG00000098801	sbno2a	91	75.616	Danio_rerio
ENSPREG00000006755	si:ch73-63e15.2	78	65.733	ENSDORG00000002916	Sbno2	90	66.160	Dipodomys_ordii
ENSPREG00000006755	si:ch73-63e15.2	78	66.240	ENSEASG00005021621	SBNO2	88	70.113	Equus_asinus_asinus
ENSPREG00000006755	si:ch73-63e15.2	78	66.080	ENSECAG00000011827	SBNO2	88	70.200	Equus_caballus
ENSPREG00000006755	si:ch73-63e15.2	99	72.073	ENSELUG00000020457	si:ch73-63e15.2	99	71.867	Esox_lucius
ENSPREG00000006755	si:ch73-63e15.2	77	68.780	ENSFALG00000013988	SBNO2	89	68.780	Ficedula_albicollis
ENSPREG00000006755	si:ch73-63e15.2	70	66.961	ENSFDAG00000015186	SBNO2	88	66.180	Fukomys_damarensis
ENSPREG00000006755	si:ch73-63e15.2	100	84.106	ENSFHEG00000022262	si:ch73-63e15.2	100	84.544	Fundulus_heteroclitus
ENSPREG00000006755	si:ch73-63e15.2	72	85.627	ENSGMOG00000007542	si:ch73-63e15.2	95	85.627	Gadus_morhua
ENSPREG00000006755	si:ch73-63e15.2	76	70.684	ENSGALG00000037522	SBNO2	84	72.440	Gallus_gallus
ENSPREG00000006755	si:ch73-63e15.2	79	98.641	ENSGAFG00000004860	si:ch73-63e15.2	93	98.641	Gambusia_affinis
ENSPREG00000006755	si:ch73-63e15.2	72	88.445	ENSGACG00000013190	si:ch73-63e15.2	96	88.083	Gasterosteus_aculeatus
ENSPREG00000006755	si:ch73-63e15.2	78	69.575	ENSGAGG00000008348	SBNO2	85	73.127	Gopherus_agassizii
ENSPREG00000006755	si:ch73-63e15.2	100	75.741	ENSHBUG00000010742	si:ch73-63e15.2	100	76.528	Haplochromis_burtoni
ENSPREG00000006755	si:ch73-63e15.2	72	68.772	ENSHGLG00000008739	SBNO2	85	68.793	Heterocephalus_glaber_female
ENSPREG00000006755	si:ch73-63e15.2	73	68.089	ENSHGLG00100005269	SBNO2	99	68.089	Heterocephalus_glaber_male
ENSPREG00000006755	si:ch73-63e15.2	83	78.991	ENSHCOG00000000884	si:ch73-63e15.2	98	78.293	Hippocampus_comes
ENSPREG00000006755	si:ch73-63e15.2	80	76.320	ENSIPUG00000019672	sbno2	99	75.310	Ictalurus_punctatus
ENSPREG00000006755	si:ch73-63e15.2	87	71.761	ENSIPUG00000000537	si:ch73-63e15.2	94	74.189	Ictalurus_punctatus
ENSPREG00000006755	si:ch73-63e15.2	75	66.750	ENSSTOG00000025832	SBNO2	88	67.523	Ictidomys_tridecemlineatus
ENSPREG00000006755	si:ch73-63e15.2	78	63.331	ENSJJAG00000017397	Sbno2	91	63.440	Jaculus_jaculus
ENSPREG00000006755	si:ch73-63e15.2	100	78.156	ENSKMAG00000005541	si:ch73-63e15.2	100	78.135	Kryptolebias_marmoratus
ENSPREG00000006755	si:ch73-63e15.2	94	75.662	ENSLBEG00000025016	si:ch73-63e15.2	99	88.360	Labrus_bergylta
ENSPREG00000006755	si:ch73-63e15.2	80	79.827	ENSLOCG00000004643	si:ch73-63e15.2	87	82.333	Lepisosteus_oculatus
ENSPREG00000006755	si:ch73-63e15.2	72	65.520	ENSLAFG00000008824	SBNO2	89	65.587	Loxodonta_africana
ENSPREG00000006755	si:ch73-63e15.2	72	67.068	ENSMFAG00000040030	SBNO2	89	67.129	Macaca_fascicularis
ENSPREG00000006755	si:ch73-63e15.2	72	68.303	ENSMMUG00000010886	SBNO2	90	65.113	Macaca_mulatta
ENSPREG00000006755	si:ch73-63e15.2	72	68.389	ENSMNEG00000039927	SBNO2	87	68.316	Macaca_nemestrina
ENSPREG00000006755	si:ch73-63e15.2	66	69.144	ENSMLEG00000038556	SBNO2	90	69.050	Mandrillus_leucophaeus
ENSPREG00000006755	si:ch73-63e15.2	100	75.650	ENSMAMG00000018758	si:ch73-63e15.2	100	75.756	Mastacembelus_armatus
ENSPREG00000006755	si:ch73-63e15.2	100	76.052	ENSMZEG00005010682	si:ch73-63e15.2	100	76.084	Maylandia_zebra
ENSPREG00000006755	si:ch73-63e15.2	73	72.038	ENSMGAG00000003801	SBNO2	90	72.038	Meleagris_gallopavo
ENSPREG00000006755	si:ch73-63e15.2	72	68.534	ENSMAUG00000008034	Sbno2	88	67.164	Mesocricetus_auratus
ENSPREG00000006755	si:ch73-63e15.2	78	65.144	ENSMICG00000013071	SBNO2	88	68.626	Microcebus_murinus
ENSPREG00000006755	si:ch73-63e15.2	72	68.517	ENSMOCG00000010504	Sbno2	88	66.611	Microtus_ochrogaster
ENSPREG00000006755	si:ch73-63e15.2	78	67.141	ENSMODG00000005382	SBNO2	89	67.141	Monodelphis_domestica
ENSPREG00000006755	si:ch73-63e15.2	64	79.877	ENSMALG00000021831	si:ch73-63e15.2	99	79.877	Monopterus_albus
ENSPREG00000006755	si:ch73-63e15.2	75	65.757	ENSMUSG00000035673	Sbno2	97	66.446	Mus_musculus
ENSPREG00000006755	si:ch73-63e15.2	75	66.088	MGP_PahariEiJ_G0030976	Sbno2	88	66.694	Mus_pahari
ENSPREG00000006755	si:ch73-63e15.2	75	65.922	MGP_SPRETEiJ_G0016381	Sbno2	94	66.529	Mus_spretus
ENSPREG00000006755	si:ch73-63e15.2	65	69.282	ENSMPUG00000008747	SBNO2	95	69.378	Mustela_putorius_furo
ENSPREG00000006755	si:ch73-63e15.2	72	68.048	ENSNGAG00000004308	Sbno2	90	66.033	Nannospalax_galili
ENSPREG00000006755	si:ch73-63e15.2	77	88.514	ENSNBRG00000022968	si:ch73-63e15.2	99	89.261	Neolamprologus_brichardi
ENSPREG00000006755	si:ch73-63e15.2	72	69.740	ENSNLEG00000001305	SBNO2	89	69.740	Nomascus_leucogenys
ENSPREG00000006755	si:ch73-63e15.2	59	66.808	ENSMEUG00000013511	-	78	66.808	Notamacropus_eugenii
ENSPREG00000006755	si:ch73-63e15.2	70	68.650	ENSOPRG00000017238	SBNO2	94	68.118	Ochotona_princeps
ENSPREG00000006755	si:ch73-63e15.2	75	66.035	ENSODEG00000011822	SBNO2	89	65.818	Octodon_degus
ENSPREG00000006755	si:ch73-63e15.2	100	76.685	ENSONIG00000002490	si:ch73-63e15.2	94	87.956	Oreochromis_niloticus
ENSPREG00000006755	si:ch73-63e15.2	100	75.138	ENSORLG00000000913	si:ch73-63e15.2	99	75.887	Oryzias_latipes
ENSPREG00000006755	si:ch73-63e15.2	100	75.077	ENSORLG00020010978	si:ch73-63e15.2	100	75.452	Oryzias_latipes_hni
ENSPREG00000006755	si:ch73-63e15.2	100	75.323	ENSORLG00015000202	si:ch73-63e15.2	100	75.775	Oryzias_latipes_hsok
ENSPREG00000006755	si:ch73-63e15.2	100	76.064	ENSOMEG00000000359	si:ch73-63e15.2	100	76.126	Oryzias_melastigma
ENSPREG00000006755	si:ch73-63e15.2	75	65.235	ENSOARG00000011130	SBNO2	90	65.318	Ovis_aries
ENSPREG00000006755	si:ch73-63e15.2	72	67.212	ENSPPAG00000032482	SBNO2	90	67.212	Pan_paniscus
ENSPREG00000006755	si:ch73-63e15.2	72	68.142	ENSPTRG00000010185	SBNO2	87	68.343	Pan_troglodytes
ENSPREG00000006755	si:ch73-63e15.2	72	65.048	ENSPANG00000009658	SBNO2	87	64.757	Papio_anubis
ENSPREG00000006755	si:ch73-63e15.2	64	79.138	ENSPKIG00000009707	-	84	79.034	Paramormyrops_kingsleyae
ENSPREG00000006755	si:ch73-63e15.2	91	80.914	ENSPKIG00000024201	si:ch73-63e15.2	84	83.521	Paramormyrops_kingsleyae
ENSPREG00000006755	si:ch73-63e15.2	61	73.834	ENSPSIG00000002852	SBNO2	99	73.834	Pelodiscus_sinensis
ENSPREG00000006755	si:ch73-63e15.2	82	78.632	ENSPMGG00000014375	si:ch73-63e15.2	96	78.324	Periophthalmus_magnuspinnatus
ENSPREG00000006755	si:ch73-63e15.2	75	64.244	ENSPEMG00000024122	Sbno2	88	64.804	Peromyscus_maniculatus_bairdii
ENSPREG00000006755	si:ch73-63e15.2	78	67.117	ENSPCIG00000011264	SBNO2	89	67.434	Phascolarctos_cinereus
ENSPREG00000006755	si:ch73-63e15.2	100	97.977	ENSPFOG00000004096	si:ch73-63e15.2	100	97.977	Poecilia_formosa
ENSPREG00000006755	si:ch73-63e15.2	96	97.967	ENSPLAG00000014653	si:ch73-63e15.2	100	97.967	Poecilia_latipinna
ENSPREG00000006755	si:ch73-63e15.2	100	98.100	ENSPMEG00000002129	si:ch73-63e15.2	100	98.100	Poecilia_mexicana
ENSPREG00000006755	si:ch73-63e15.2	65	69.335	ENSPCAG00000012256	SBNO2	77	69.335	Procavia_capensis
ENSPREG00000006755	si:ch73-63e15.2	72	62.813	ENSPCOG00000015216	SBNO2	87	62.985	Propithecus_coquereli
ENSPREG00000006755	si:ch73-63e15.2	100	75.802	ENSPNYG00000019926	si:ch73-63e15.2	100	76.528	Pundamilia_nyererei
ENSPREG00000006755	si:ch73-63e15.2	84	72.875	ENSPNAG00000026609	sbno2a	99	69.743	Pygocentrus_nattereri
ENSPREG00000006755	si:ch73-63e15.2	79	78.822	ENSPNAG00000020260	si:ch73-63e15.2	85	80.714	Pygocentrus_nattereri
ENSPREG00000006755	si:ch73-63e15.2	75	66.198	ENSRNOG00000013987	Sbno2	89	69.017	Rattus_norvegicus
ENSPREG00000006755	si:ch73-63e15.2	67	67.315	ENSRBIG00000009740	SBNO2	86	67.448	Rhinopithecus_bieti
ENSPREG00000006755	si:ch73-63e15.2	63	71.376	ENSRROG00000044671	SBNO2	85	70.610	Rhinopithecus_roxellana
ENSPREG00000006755	si:ch73-63e15.2	72	67.969	ENSSBOG00000023562	SBNO2	88	67.969	Saimiri_boliviensis_boliviensis
ENSPREG00000006755	si:ch73-63e15.2	70	71.378	ENSSHAG00000010241	SBNO2	97	71.378	Sarcophilus_harrisii
ENSPREG00000006755	si:ch73-63e15.2	73	81.427	ENSSFOG00015005861	si:ch73-63e15.2	94	81.857	Scleropages_formosus
ENSPREG00000006755	si:ch73-63e15.2	100	76.751	ENSSMAG00000012489	si:ch73-63e15.2	100	77.245	Scophthalmus_maximus
ENSPREG00000006755	si:ch73-63e15.2	100	77.300	ENSSDUG00000003527	si:ch73-63e15.2	100	77.570	Seriola_dumerili
ENSPREG00000006755	si:ch73-63e15.2	100	77.240	ENSSLDG00000004623	si:ch73-63e15.2	100	77.509	Seriola_lalandi_dorsalis
ENSPREG00000006755	si:ch73-63e15.2	83	83.840	ENSSPAG00000017717	si:ch73-63e15.2	99	79.462	Stegastes_partitus
ENSPREG00000006755	si:ch73-63e15.2	77	66.081	ENSSSCG00000030042	SBNO2	89	69.437	Sus_scrofa
ENSPREG00000006755	si:ch73-63e15.2	70	87.805	ENSTRUG00000018193	si:ch73-63e15.2	86	87.805	Takifugu_rubripes
ENSPREG00000006755	si:ch73-63e15.2	71	66.522	ENSUAMG00000006568	SBNO2	89	75.275	Ursus_americanus
ENSPREG00000006755	si:ch73-63e15.2	78	66.667	ENSVVUG00000022823	SBNO2	89	66.667	Vulpes_vulpes
ENSPREG00000006755	si:ch73-63e15.2	65	76.768	ENSXETG00000021579	sbno2	91	76.768	Xenopus_tropicalis
ENSPREG00000006755	si:ch73-63e15.2	83	93.770	ENSXCOG00000009209	si:ch73-63e15.2	94	93.770	Xiphophorus_couchianus
ENSPREG00000006755	si:ch73-63e15.2	100	96.639	ENSXMAG00000012091	si:ch73-63e15.2	100	96.667	Xiphophorus_maculatus