EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006780 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3186 bases
Position: chrLG10:28663680-28666865
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009966	Nucleoplasmin	PF03066.15	8.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010082	-	411	-	ENSPREP00000009966	136 (aa)	-	-

Gene Model

Click here to download ENSPREG00000006780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006780	npm1b	62	44.048	ENSPREG00000020765	npm3	52	44.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006780	npm1b	65	89.888	ENSACIG00000019100	npm1b	52	89.888	Amphilophus_citrinellus
ENSPREG00000006780	npm1b	85	66.102	ENSELUG00000022123	npm1b	65	66.102	Esox_lucius
ENSPREG00000006780	npm1b	53	88.889	ENSMZEG00005002840	-	75	85.526	Maylandia_zebra
ENSPREG00000006780	npm1b	85	72.414	ENSMMOG00000003778	npm1b	63	84.043	Mola_mola
ENSPREG00000006780	npm1b	69	76.842	ENSPMGG00000008275	npm1b	65	76.842	Periophthalmus_magnuspinnatus