EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006802 (Gene tree)
Gene ID: 103462652
Gene Symbol: sall1a
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 54802 bases
Position: chrLG3:25192438-25247239
Accession: 103462652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000009988	zf-C2H2	PF00096.26	4.4e-35	1	7
ENSPREP00000009988	zf-C2H2	PF00096.26	4.4e-35	2	7
ENSPREP00000009988	zf-C2H2	PF00096.26	4.4e-35	3	7
ENSPREP00000009988	zf-C2H2	PF00096.26	4.4e-35	4	7
ENSPREP00000009988	zf-C2H2	PF00096.26	4.4e-35	5	7
ENSPREP00000009988	zf-C2H2	PF00096.26	4.4e-35	6	7
ENSPREP00000009988	zf-C2H2	PF00096.26	4.4e-35	7	7
ENSPREP00000009994	zf-C2H2	PF00096.26	5.2e-35	1	7
ENSPREP00000009994	zf-C2H2	PF00096.26	5.2e-35	2	7
ENSPREP00000009994	zf-C2H2	PF00096.26	5.2e-35	3	7
ENSPREP00000009994	zf-C2H2	PF00096.26	5.2e-35	4	7
ENSPREP00000009994	zf-C2H2	PF00096.26	5.2e-35	5	7
ENSPREP00000009994	zf-C2H2	PF00096.26	5.2e-35	6	7
ENSPREP00000009994	zf-C2H2	PF00096.26	5.2e-35	7	7
ENSPREP00000009988	zf-met	PF12874.7	1e-23	1	5
ENSPREP00000009988	zf-met	PF12874.7	1e-23	2	5
ENSPREP00000009988	zf-met	PF12874.7	1e-23	3	5
ENSPREP00000009988	zf-met	PF12874.7	1e-23	4	5
ENSPREP00000009988	zf-met	PF12874.7	1e-23	5	5
ENSPREP00000009994	zf-met	PF12874.7	1.1e-23	1	5
ENSPREP00000009994	zf-met	PF12874.7	1.1e-23	2	5
ENSPREP00000009994	zf-met	PF12874.7	1.1e-23	3	5
ENSPREP00000009994	zf-met	PF12874.7	1.1e-23	4	5
ENSPREP00000009994	zf-met	PF12874.7	1.1e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010104	-	3864	-	ENSPREP00000009988	1287 (aa)	-	-
ENSPRET00000010110	-	3930	XM_008405559	ENSPREP00000009994	1309 (aa)	XP_008403781	UPI0004A37310

Gene Model

Click here to download ENSPREG00000006802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006802	sall1a	91	65.385	ENSPREG00000021140	sall4	95	65.385
ENSPREG00000006802	sall1a	85	79.412	ENSPREG00000014420	sall3a	92	79.412
ENSPREG00000006802	sall1a	56	45.455	ENSPREG00000002715	-	93	45.455
ENSPREG00000006802	sall1a	59	51.020	ENSPREG00000008826	-	86	53.061
ENSPREG00000006802	sall1a	85	59.615	ENSPREG00000015079	sall3b	89	59.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006802	sall1a	99	67.464	ENSG00000103449	SALL1	100	67.539	Homo_sapiens
ENSPREG00000006802	sall1a	100	92.895	ENSAPOG00000022764	sall1a	100	92.895	Acanthochromis_polyacanthus
ENSPREG00000006802	sall1a	99	66.642	ENSAMEG00000006817	SALL1	100	67.116	Ailuropoda_melanoleuca
ENSPREG00000006802	sall1a	100	91.367	ENSACIG00000004231	sall1a	100	91.367	Amphilophus_citrinellus
ENSPREG00000006802	sall1a	100	93.201	ENSAOCG00000002800	sall1a	100	93.201	Amphiprion_ocellaris
ENSPREG00000006802	sall1a	100	92.972	ENSAPEG00000010179	sall1a	100	92.972	Amphiprion_percula
ENSPREG00000006802	sall1a	99	91.208	ENSATEG00000003006	sall1a	99	91.208	Anabas_testudineus
ENSPREG00000006802	sall1a	100	69.392	ENSAPLG00000003356	SALL1	100	69.692	Anas_platyrhynchos
ENSPREG00000006802	sall1a	100	67.403	ENSACAG00000014399	SALL1	97	67.095	Anolis_carolinensis
ENSPREG00000006802	sall1a	99	67.788	ENSANAG00000027238	SALL1	100	68.030	Aotus_nancymaae
ENSPREG00000006802	sall1a	100	91.520	ENSACLG00000017148	sall1a	100	91.520	Astatotilapia_calliptera
ENSPREG00000006802	sall1a	100	79.711	ENSAMXG00000018599	sall1a	100	80.167	Astyanax_mexicanus
ENSPREG00000006802	sall1a	99	52.374	ENSAMXG00000017702	sall1b	99	52.928	Astyanax_mexicanus
ENSPREG00000006802	sall1a	100	67.189	ENSBTAG00000008544	SALL1	100	67.414	Bos_taurus
ENSPREG00000006802	sall1a	99	67.940	ENSCJAG00000001740	SALL1	100	68.287	Callithrix_jacchus
ENSPREG00000006802	sall1a	99	66.866	ENSCAFG00000009755	SALL1	100	67.764	Canis_familiaris
ENSPREG00000006802	sall1a	99	66.866	ENSCAFG00020002842	SALL1	100	67.764	Canis_lupus_dingo
ENSPREG00000006802	sall1a	100	67.065	ENSCHIG00000026074	SALL1	100	67.339	Capra_hircus
ENSPREG00000006802	sall1a	99	68.460	ENSTSYG00000029464	SALL1	100	68.460	Carlito_syrichta
ENSPREG00000006802	sall1a	99	68.015	ENSCPOG00000006564	SALL1	99	67.991	Cavia_porcellus
ENSPREG00000006802	sall1a	99	66.142	ENSCCAG00000001639	SALL1	100	66.343	Cebus_capucinus
ENSPREG00000006802	sall1a	99	67.564	ENSCATG00000004982	SALL1	100	68.060	Cercocebus_atys
ENSPREG00000006802	sall1a	99	67.566	ENSCLAG00000006380	SALL1	100	67.889	Chinchilla_lanigera
ENSPREG00000006802	sall1a	99	66.741	ENSCSAG00000005319	SALL1	100	67.236	Chlorocebus_sabaeus
ENSPREG00000006802	sall1a	64	66.016	ENSCHOG00000000800	-	69	66.275	Choloepus_hoffmanni
ENSPREG00000006802	sall1a	100	69.317	ENSCPBG00000015924	SALL1	100	69.692	Chrysemys_picta_bellii
ENSPREG00000006802	sall1a	99	67.940	ENSCANG00000036664	SALL1	100	68.090	Colobus_angolensis_palliatus
ENSPREG00000006802	sall1a	99	66.493	ENSCGRG00001023314	-	100	66.791	Cricetulus_griseus_chok1gshd
ENSPREG00000006802	sall1a	99	66.362	ENSCGRG00000009496	Sall1	100	66.667	Cricetulus_griseus_crigri
ENSPREG00000006802	sall1a	99	88.567	ENSCSEG00000009349	sall1a	99	88.567	Cynoglossus_semilaevis
ENSPREG00000006802	sall1a	90	94.755	ENSCVAG00000020513	sall1a	99	94.755	Cyprinodon_variegatus
ENSPREG00000006802	sall1a	99	48.228	ENSDARG00000075891	sall1b	99	47.345	Danio_rerio
ENSPREG00000006802	sall1a	100	79.318	ENSDARG00000074319	sall1a	100	78.939	Danio_rerio
ENSPREG00000006802	sall1a	99	67.889	ENSDNOG00000016413	SALL1	100	67.964	Dasypus_novemcinctus
ENSPREG00000006802	sall1a	99	67.252	ENSETEG00000015150	SALL1	99	67.406	Echinops_telfairi
ENSPREG00000006802	sall1a	63	42.267	ENSEBUG00000008798	SALL1	94	35.600	Eptatretus_burgeri
ENSPREG00000006802	sall1a	60	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSPREG00000006802	sall1a	99	67.339	ENSEASG00005014602	SALL1	100	67.838	Equus_asinus_asinus
ENSPREG00000006802	sall1a	90	65.540	ENSECAG00000011334	SALL1	99	66.061	Equus_caballus
ENSPREG00000006802	sall1a	99	67.555	ENSEEUG00000002014	SALL1	100	67.429	Erinaceus_europaeus
ENSPREG00000006802	sall1a	100	77.547	ENSELUG00000006159	sall1a	100	77.618	Esox_lucius
ENSPREG00000006802	sall1a	100	53.761	ENSELUG00000017774	-	100	54.444	Esox_lucius
ENSPREG00000006802	sall1a	100	66.019	ENSFCAG00000024654	SALL1	100	66.990	Felis_catus
ENSPREG00000006802	sall1a	100	69.767	ENSFALG00000000074	SALL1	100	69.820	Ficedula_albicollis
ENSPREG00000006802	sall1a	75	63.415	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSPREG00000006802	sall1a	100	95.951	ENSFHEG00000012579	sall1a	100	95.951	Fundulus_heteroclitus
ENSPREG00000006802	sall1a	100	83.486	ENSGMOG00000006103	sall1a	100	83.486	Gadus_morhua
ENSPREG00000006802	sall1a	99	40.662	ENSGMOG00000013383	-	99	41.067	Gadus_morhua
ENSPREG00000006802	sall1a	100	69.715	ENSGALG00000039238	SALL1	100	69.595	Gallus_gallus
ENSPREG00000006802	sall1a	100	98.396	ENSGAFG00000009964	sall1a	100	98.396	Gambusia_affinis
ENSPREG00000006802	sall1a	99	88.991	ENSGACG00000016702	sall1a	99	88.991	Gasterosteus_aculeatus
ENSPREG00000006802	sall1a	100	69.265	ENSGAGG00000013979	SALL1	100	69.617	Gopherus_agassizii
ENSPREG00000006802	sall1a	99	67.689	ENSGGOG00000000663	SALL1	100	67.764	Gorilla_gorilla
ENSPREG00000006802	sall1a	100	91.444	ENSHBUG00000022005	sall1a	100	91.444	Haplochromis_burtoni
ENSPREG00000006802	sall1a	99	68.390	ENSHGLG00000004288	-	100	68.563	Heterocephalus_glaber_female
ENSPREG00000006802	sall1a	99	68.390	ENSHGLG00100017496	SALL1	100	68.563	Heterocephalus_glaber_male
ENSPREG00000006802	sall1a	100	85.045	ENSHCOG00000000974	sall1a	100	84.970	Hippocampus_comes
ENSPREG00000006802	sall1a	99	50.717	ENSIPUG00000022928	sall1b	99	50.491	Ictalurus_punctatus
ENSPREG00000006802	sall1a	100	79.559	ENSIPUG00000016265	SALL1	100	78.859	Ictalurus_punctatus
ENSPREG00000006802	sall1a	99	67.608	ENSSTOG00000020885	SALL1	100	68.053	Ictidomys_tridecemlineatus
ENSPREG00000006802	sall1a	100	92.513	ENSKMAG00000016681	sall1a	100	92.513	Kryptolebias_marmoratus
ENSPREG00000006802	sall1a	99	88.507	ENSLBEG00000012207	sall1a	95	88.507	Labrus_bergylta
ENSPREG00000006802	sall1a	100	68.595	ENSLACG00000003556	SALL1	100	68.896	Latimeria_chalumnae
ENSPREG00000006802	sall1a	99	37.881	ENSLACG00000014018	-	93	38.430	Latimeria_chalumnae
ENSPREG00000006802	sall1a	100	100.000	ENSLOCG00000007283	sall1b	94	100.000	Lepisosteus_oculatus
ENSPREG00000006802	sall1a	99	67.532	ENSLAFG00000015251	SALL1	100	67.730	Loxodonta_africana
ENSPREG00000006802	sall1a	99	67.588	ENSMFAG00000003298	SALL1	100	67.910	Macaca_fascicularis
ENSPREG00000006802	sall1a	94	67.391	ENSMMUG00000017200	SALL1	100	67.659	Macaca_mulatta
ENSPREG00000006802	sall1a	94	67.418	ENSMNEG00000034770	SALL1	100	67.605	Macaca_nemestrina
ENSPREG00000006802	sall1a	99	67.713	ENSMLEG00000036406	SALL1	100	68.036	Mandrillus_leucophaeus
ENSPREG00000006802	sall1a	99	92.055	ENSMAMG00000004164	sall1a	99	92.055	Mastacembelus_armatus
ENSPREG00000006802	sall1a	100	91.520	ENSMZEG00005006479	sall1a	100	91.520	Maylandia_zebra
ENSPREG00000006802	sall1a	99	69.519	ENSMGAG00000004704	SALL1	100	69.396	Meleagris_gallopavo
ENSPREG00000006802	sall1a	100	65.821	ENSMAUG00000019093	Sall1	100	65.970	Mesocricetus_auratus
ENSPREG00000006802	sall1a	100	67.416	ENSMICG00000036486	SALL1	100	67.640	Microcebus_murinus
ENSPREG00000006802	sall1a	99	90.367	ENSMMOG00000016400	sall1a	99	90.367	Mola_mola
ENSPREG00000006802	sall1a	99	68.614	ENSMODG00000013114	SALL1	99	69.069	Monodelphis_domestica
ENSPREG00000006802	sall1a	99	91.055	ENSMALG00000013400	sall1a	99	91.055	Monopterus_albus
ENSPREG00000006802	sall1a	100	66.568	MGP_CAROLIEiJ_G0031362	Sall1	100	66.741	Mus_caroli
ENSPREG00000006802	sall1a	100	66.296	ENSMUSG00000031665	Sall1	100	66.642	Mus_musculus
ENSPREG00000006802	sall1a	99	66.568	MGP_PahariEiJ_G0022961	Sall1	100	66.444	Mus_pahari
ENSPREG00000006802	sall1a	99	66.271	MGP_SPRETEiJ_G0032480	Sall1	100	66.568	Mus_spretus
ENSPREG00000006802	sall1a	99	66.058	ENSMPUG00000003265	SALL1	96	66.667	Mustela_putorius_furo
ENSPREG00000006802	sall1a	99	65.161	ENSMLUG00000015541	SALL1	99	65.775	Myotis_lucifugus
ENSPREG00000006802	sall1a	100	91.673	ENSNBRG00000009307	sall1a	100	91.673	Neolamprologus_brichardi
ENSPREG00000006802	sall1a	95	79.558	ENSNLEG00000001008	SALL1	99	79.121	Nomascus_leucogenys
ENSPREG00000006802	sall1a	99	68.717	ENSMEUG00000012206	SALL1	99	68.839	Notamacropus_eugenii
ENSPREG00000006802	sall1a	87	71.105	ENSOPRG00000005645	SALL1	72	70.881	Ochotona_princeps
ENSPREG00000006802	sall1a	99	67.416	ENSODEG00000003685	SALL1	100	67.865	Octodon_degus
ENSPREG00000006802	sall1a	100	92.055	ENSONIG00000002831	sall1a	100	92.055	Oreochromis_niloticus
ENSPREG00000006802	sall1a	100	63.780	ENSOANG00000013399	SALL1	97	77.642	Ornithorhynchus_anatinus
ENSPREG00000006802	sall1a	100	90.222	ENSORLG00000013827	sall1a	100	90.809	Oryzias_latipes
ENSPREG00000006802	sall1a	100	90.222	ENSORLG00020020570	sall1a	100	90.222	Oryzias_latipes_hni
ENSPREG00000006802	sall1a	100	90.222	ENSORLG00015018830	sall1a	100	90.894	Oryzias_latipes_hsok
ENSPREG00000006802	sall1a	100	89.916	ENSOMEG00000016043	sall1a	100	90.190	Oryzias_melastigma
ENSPREG00000006802	sall1a	100	67.836	ENSOGAG00000027316	SALL1	100	67.937	Otolemur_garnettii
ENSPREG00000006802	sall1a	100	63.406	ENSOARG00000017583	SALL1	100	63.528	Ovis_aries
ENSPREG00000006802	sall1a	99	67.896	ENSPPAG00000035657	SALL1	100	67.735	Pan_paniscus
ENSPREG00000006802	sall1a	99	50.964	ENSPPAG00000035136	-	98	51.422	Pan_paniscus
ENSPREG00000006802	sall1a	100	65.945	ENSPPRG00000023283	SALL1	100	66.909	Panthera_pardus
ENSPREG00000006802	sall1a	89	63.171	ENSPTIG00000013539	-	94	58.084	Panthera_tigris_altaica
ENSPREG00000006802	sall1a	98	50.938	ENSPTRG00000045256	-	97	51.565	Pan_troglodytes
ENSPREG00000006802	sall1a	99	67.491	ENSPTRG00000008108	SALL1	100	67.809	Pan_troglodytes
ENSPREG00000006802	sall1a	99	67.638	ENSPANG00000024176	SALL1	100	67.961	Papio_anubis
ENSPREG00000006802	sall1a	100	72.487	ENSPKIG00000022251	sall1a	100	72.562	Paramormyrops_kingsleyae
ENSPREG00000006802	sall1a	100	70.726	ENSPKIG00000005383	-	100	71.202	Paramormyrops_kingsleyae
ENSPREG00000006802	sall1a	100	69.767	ENSPSIG00000008582	SALL1	100	69.895	Pelodiscus_sinensis
ENSPREG00000006802	sall1a	99	85.345	ENSPMGG00000021788	sall1a	99	83.937	Periophthalmus_magnuspinnatus
ENSPREG00000006802	sall1a	99	47.430	ENSPMAG00000008148	sall1b	97	48.474	Petromyzon_marinus
ENSPREG00000006802	sall1a	99	68.764	ENSPCIG00000017840	SALL1	99	68.839	Phascolarctos_cinereus
ENSPREG00000006802	sall1a	99	98.598	ENSPFOG00000015799	sall1a	96	98.598	Poecilia_formosa
ENSPREG00000006802	sall1a	100	98.701	ENSPLAG00000022539	sall1a	100	98.701	Poecilia_latipinna
ENSPREG00000006802	sall1a	100	98.854	ENSPMEG00000020894	sall1a	100	98.854	Poecilia_mexicana
ENSPREG00000006802	sall1a	90	66.526	ENSPPYG00000007345	SALL1	96	66.946	Pongo_abelii
ENSPREG00000006802	sall1a	84	71.605	ENSPCAG00000008162	SALL1	93	71.605	Procavia_capensis
ENSPREG00000006802	sall1a	100	67.266	ENSPCOG00000028192	SALL1	100	67.638	Propithecus_coquereli
ENSPREG00000006802	sall1a	68	69.284	ENSPVAG00000015374	SALL1	100	69.364	Pteropus_vampyrus
ENSPREG00000006802	sall1a	100	91.597	ENSPNYG00000010865	sall1a	100	91.597	Pundamilia_nyererei
ENSPREG00000006802	sall1a	100	78.350	ENSPNAG00000023644	sall1a	100	78.804	Pygocentrus_nattereri
ENSPREG00000006802	sall1a	99	54.129	ENSPNAG00000007442	sall1b	99	54.198	Pygocentrus_nattereri
ENSPREG00000006802	sall1a	70	65.306	ENSPNAG00000028248	-	71	65.306	Pygocentrus_nattereri
ENSPREG00000006802	sall1a	100	66.942	ENSRNOG00000013907	Sall1	100	67.016	Rattus_norvegicus
ENSPREG00000006802	sall1a	94	67.204	ENSRBIG00000015707	SALL1	100	67.952	Rhinopithecus_bieti
ENSPREG00000006802	sall1a	99	67.690	ENSRROG00000035777	SALL1	100	67.952	Rhinopithecus_roxellana
ENSPREG00000006802	sall1a	99	67.912	ENSSBOG00000032186	SALL1	100	68.033	Saimiri_boliviensis_boliviensis
ENSPREG00000006802	sall1a	99	68.342	ENSSHAG00000009477	SALL1	99	68.468	Sarcophilus_harrisii
ENSPREG00000006802	sall1a	100	72.892	ENSSFOG00015020020	sall1a	100	72.816	Scleropages_formosus
ENSPREG00000006802	sall1a	99	71.461	ENSSFOG00015001590	sall1a	99	72.055	Scleropages_formosus
ENSPREG00000006802	sall1a	99	91.131	ENSSMAG00000009160	sall1a	99	91.131	Scophthalmus_maximus
ENSPREG00000006802	sall1a	90	55.556	ENSSDUG00000000748	sall1b	99	55.556	Seriola_dumerili
ENSPREG00000006802	sall1a	99	92.737	ENSSDUG00000006507	sall1a	99	92.737	Seriola_dumerili
ENSPREG00000006802	sall1a	99	92.737	ENSSLDG00000017721	sall1a	99	92.737	Seriola_lalandi_dorsalis
ENSPREG00000006802	sall1a	99	67.023	ENSSARG00000000661	SALL1	100	66.945	Sorex_araneus
ENSPREG00000006802	sall1a	100	68.867	ENSSPUG00000000156	SALL1	100	69.190	Sphenodon_punctatus
ENSPREG00000006802	sall1a	100	93.130	ENSSPAG00000021615	sall1a	100	93.130	Stegastes_partitus
ENSPREG00000006802	sall1a	99	66.766	ENSSSCG00000002836	SALL1	100	66.841	Sus_scrofa
ENSPREG00000006802	sall1a	100	69.542	ENSTGUG00000007514	SALL1	100	69.444	Taeniopygia_guttata
ENSPREG00000006802	sall1a	91	86.527	ENSTRUG00000008950	sall1a	100	86.527	Takifugu_rubripes
ENSPREG00000006802	sall1a	92	85.083	ENSTNIG00000004257	sall1a	100	85.083	Tetraodon_nigroviridis
ENSPREG00000006802	sall1a	73	75.000	ENSTBEG00000002119	-	53	75.000	Tupaia_belangeri
ENSPREG00000006802	sall1a	90	65.714	ENSUAMG00000023379	-	92	66.275	Ursus_americanus
ENSPREG00000006802	sall1a	90	65.997	ENSVVUG00000019383	-	99	66.639	Vulpes_vulpes
ENSPREG00000006802	sall1a	99	67.333	ENSXETG00000018417	sall1	100	65.716	Xenopus_tropicalis
ENSPREG00000006802	sall1a	97	34.294	ENSXETG00000017176	sall2	94	38.710	Xenopus_tropicalis
ENSPREG00000006802	sall1a	100	98.549	ENSXMAG00000016273	sall1a	100	98.549	Xiphophorus_maculatus