EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000006864 (Gene tree)
Gene ID: 103468726
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 9019 bases
Position: chrLG8:14751934-14760952
Accession: 103468726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000010116	RRM_1	PF00076.22	1.4e-30	1	2
ENSPREP00000010116	RRM_1	PF00076.22	1.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010232	-	2058	XM_008416001	ENSPREP00000010116	685 (aa)	XP_008414223	-

Gene Model

Click here to download ENSPREG00000006864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000006864	raver1	61	58.537	ENSPREG00000020514	raver2	52	58.537

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006864	raver1	77	88.372	ENSG00000161847	RAVER1	72	88.372	Homo_sapiens
ENSPREG00000006864	raver1	97	77.159	ENSAPOG00000017267	raver1	92	76.881	Acanthochromis_polyacanthus
ENSPREG00000006864	raver1	78	88.372	ENSAMEG00000011738	RAVER1	71	88.372	Ailuropoda_melanoleuca
ENSPREG00000006864	raver1	97	77.964	ENSAOCG00000005128	raver1	97	77.671	Amphiprion_ocellaris
ENSPREG00000006864	raver1	98	77.978	ENSAPEG00000010854	raver1	100	77.687	Amphiprion_percula
ENSPREG00000006864	raver1	98	76.111	ENSATEG00000021004	raver1	100	75.853	Anabas_testudineus
ENSPREG00000006864	raver1	71	54.864	ENSACAG00000008386	-	77	54.459	Anolis_carolinensis
ENSPREG00000006864	raver1	77	88.372	ENSANAG00000028226	RAVER1	71	88.372	Aotus_nancymaae
ENSPREG00000006864	raver1	100	77.260	ENSACLG00000018492	raver1	100	78.390	Astatotilapia_calliptera
ENSPREG00000006864	raver1	97	66.089	ENSAMXG00000005132	raver1	100	64.045	Astyanax_mexicanus
ENSPREG00000006864	raver1	65	88.372	ENSBTAG00000015721	RAVER1	73	88.372	Bos_taurus
ENSPREG00000006864	raver1	77	88.372	ENSCJAG00000005671	RAVER1	71	88.372	Callithrix_jacchus
ENSPREG00000006864	raver1	92	50.000	ENSCAFG00000017861	RAVER1	95	51.257	Canis_familiaris
ENSPREG00000006864	raver1	92	50.140	ENSCAFG00020024449	RAVER1	97	51.257	Canis_lupus_dingo
ENSPREG00000006864	raver1	65	88.372	ENSCHIG00000006718	RAVER1	73	88.372	Capra_hircus
ENSPREG00000006864	raver1	58	88.372	ENSTSYG00000027107	RAVER1	64	88.372	Carlito_syrichta
ENSPREG00000006864	raver1	70	88.372	ENSCAPG00000002269	RAVER1	72	88.372	Cavia_aperea
ENSPREG00000006864	raver1	75	88.372	ENSCPOG00000001008	RAVER1	72	88.372	Cavia_porcellus
ENSPREG00000006864	raver1	77	88.372	ENSCCAG00000031723	RAVER1	71	88.372	Cebus_capucinus
ENSPREG00000006864	raver1	77	88.372	ENSCATG00000043863	RAVER1	71	88.372	Cercocebus_atys
ENSPREG00000006864	raver1	76	88.372	ENSCLAG00000009336	RAVER1	71	88.372	Chinchilla_lanigera
ENSPREG00000006864	raver1	78	88.372	ENSCSAG00000007317	RAVER1	61	88.372	Chlorocebus_sabaeus
ENSPREG00000006864	raver1	91	49.001	ENSCPBG00000005349	-	97	49.134	Chrysemys_picta_bellii
ENSPREG00000006864	raver1	76	88.372	ENSCANG00000008337	RAVER1	70	88.372	Colobus_angolensis_palliatus
ENSPREG00000006864	raver1	77	90.698	ENSCGRG00001013260	-	74	90.698	Cricetulus_griseus_chok1gshd
ENSPREG00000006864	raver1	77	90.698	ENSCGRG00000015138	-	74	90.698	Cricetulus_griseus_crigri
ENSPREG00000006864	raver1	98	71.825	ENSCSEG00000021092	raver1	100	71.490	Cynoglossus_semilaevis
ENSPREG00000006864	raver1	100	80.082	ENSCVAG00000013971	raver1	100	80.082	Cyprinodon_variegatus
ENSPREG00000006864	raver1	98	63.421	ENSDARG00000052617	raver1	89	73.448	Danio_rerio
ENSPREG00000006864	raver1	54	86.047	ENSDNOG00000035742	-	50	86.047	Dasypus_novemcinctus
ENSPREG00000006864	raver1	76	88.372	ENSDORG00000010106	-	71	88.372	Dipodomys_ordii
ENSPREG00000006864	raver1	61	64.048	ENSEASG00005010544	-	74	64.048	Equus_asinus_asinus
ENSPREG00000006864	raver1	66	88.372	ENSECAG00000024966	RAVER1	71	88.372	Equus_caballus
ENSPREG00000006864	raver1	98	68.480	ENSELUG00000023287	raver1	100	68.219	Esox_lucius
ENSPREG00000006864	raver1	66	88.372	ENSFCAG00000009435	RAVER1	71	88.372	Felis_catus
ENSPREG00000006864	raver1	75	88.372	ENSFDAG00000015113	RAVER1	72	88.372	Fukomys_damarensis
ENSPREG00000006864	raver1	93	64.965	ENSGMOG00000003649	raver1	99	65.532	Gadus_morhua
ENSPREG00000006864	raver1	69	38.923	ENSGALG00000050608	-	53	37.549	Gallus_gallus
ENSPREG00000006864	raver1	100	86.259	ENSGAFG00000015944	raver1	100	86.259	Gambusia_affinis
ENSPREG00000006864	raver1	94	66.074	ENSGACG00000013818	raver1	100	67.852	Gasterosteus_aculeatus
ENSPREG00000006864	raver1	90	50.769	ENSGAGG00000011748	-	99	50.479	Gopherus_agassizii
ENSPREG00000006864	raver1	77	88.372	ENSGGOG00000006015	RAVER1	71	88.372	Gorilla_gorilla
ENSPREG00000006864	raver1	92	97.436	ENSHBUG00000021210	raver1	100	77.949	Haplochromis_burtoni
ENSPREG00000006864	raver1	75	88.372	ENSHGLG00000015460	RAVER1	74	88.372	Heterocephalus_glaber_female
ENSPREG00000006864	raver1	75	88.372	ENSHGLG00100000812	RAVER1	74	88.372	Heterocephalus_glaber_male
ENSPREG00000006864	raver1	100	69.074	ENSHCOG00000000449	raver1	98	70.109	Hippocampus_comes
ENSPREG00000006864	raver1	98	64.580	ENSIPUG00000013153	raver1	100	64.481	Ictalurus_punctatus
ENSPREG00000006864	raver1	78	88.372	ENSSTOG00000003241	RAVER1	73	88.372	Ictidomys_tridecemlineatus
ENSPREG00000006864	raver1	79	90.698	ENSJJAG00000018219	-	74	90.698	Jaculus_jaculus
ENSPREG00000006864	raver1	100	73.505	ENSKMAG00000017355	raver1	100	73.913	Kryptolebias_marmoratus
ENSPREG00000006864	raver1	93	77.778	ENSLBEG00000008268	raver1	93	77.778	Labrus_bergylta
ENSPREG00000006864	raver1	84	46.667	ENSLACG00000005809	-	74	93.023	Latimeria_chalumnae
ENSPREG00000006864	raver1	98	57.662	ENSLOCG00000007500	raver1	100	57.727	Lepisosteus_oculatus
ENSPREG00000006864	raver1	78	88.372	ENSLAFG00000003664	-	73	88.372	Loxodonta_africana
ENSPREG00000006864	raver1	78	88.372	ENSMFAG00000037977	RAVER1	95	50.889	Macaca_fascicularis
ENSPREG00000006864	raver1	78	88.372	ENSMMUG00000014897	RAVER1	71	88.372	Macaca_mulatta
ENSPREG00000006864	raver1	78	88.372	ENSMNEG00000028390	RAVER1	71	88.372	Macaca_nemestrina
ENSPREG00000006864	raver1	77	88.372	ENSMLEG00000041959	RAVER1	71	88.372	Mandrillus_leucophaeus
ENSPREG00000006864	raver1	98	76.705	ENSMAMG00000012059	raver1	100	76.290	Mastacembelus_armatus
ENSPREG00000006864	raver1	100	77.260	ENSMZEG00005019002	raver1	100	78.390	Maylandia_zebra
ENSPREG00000006864	raver1	77	90.698	ENSMAUG00000017948	-	74	90.698	Mesocricetus_auratus
ENSPREG00000006864	raver1	92	50.782	ENSMICG00000010326	RAVER1	97	51.729	Microcebus_murinus
ENSPREG00000006864	raver1	77	90.698	ENSMOCG00000015553	-	74	90.698	Microtus_ochrogaster
ENSPREG00000006864	raver1	98	75.623	ENSMMOG00000012093	raver1	100	75.238	Mola_mola
ENSPREG00000006864	raver1	88	50.000	ENSMODG00000005584	-	87	51.190	Monodelphis_domestica
ENSPREG00000006864	raver1	100	71.467	ENSMALG00000016569	raver1	100	73.098	Monopterus_albus
ENSPREG00000006864	raver1	78	90.698	MGP_CAROLIEiJ_G0031860	-	74	90.698	Mus_caroli
ENSPREG00000006864	raver1	77	90.698	ENSMUSG00000010205	Raver1	74	90.698	Mus_musculus
ENSPREG00000006864	raver1	77	90.698	MGP_PahariEiJ_G0014726	-	74	90.698	Mus_pahari
ENSPREG00000006864	raver1	77	90.698	MGP_SPRETEiJ_G0032984	-	74	90.698	Mus_spretus
ENSPREG00000006864	raver1	75	88.372	ENSMPUG00000006712	RAVER1	71	88.372	Mustela_putorius_furo
ENSPREG00000006864	raver1	92	49.580	ENSMLUG00000012328	RAVER1	97	50.909	Myotis_lucifugus
ENSPREG00000006864	raver1	76	88.372	ENSNGAG00000001260	-	73	88.372	Nannospalax_galili
ENSPREG00000006864	raver1	100	65.489	ENSNBRG00000010139	raver1	100	68.342	Neolamprologus_brichardi
ENSPREG00000006864	raver1	77	88.372	ENSNLEG00000012181	RAVER1	71	88.372	Nomascus_leucogenys
ENSPREG00000006864	raver1	71	93.023	ENSMEUG00000003281	-	77	75.000	Notamacropus_eugenii
ENSPREG00000006864	raver1	75	88.372	ENSODEG00000016260	RAVER1	72	88.372	Octodon_degus
ENSPREG00000006864	raver1	91	77.177	ENSONIG00000001559	raver1	100	78.979	Oreochromis_niloticus
ENSPREG00000006864	raver1	78	88.372	ENSOCUG00000020918	RAVER1	73	88.372	Oryctolagus_cuniculus
ENSPREG00000006864	raver1	100	72.988	ENSORLG00000005458	raver1	100	72.988	Oryzias_latipes
ENSPREG00000006864	raver1	100	73.124	ENSORLG00020004392	raver1	100	73.124	Oryzias_latipes_hni
ENSPREG00000006864	raver1	100	73.670	ENSORLG00015017222	raver1	100	73.670	Oryzias_latipes_hsok
ENSPREG00000006864	raver1	100	74.490	ENSOMEG00000023956	raver1	100	74.490	Oryzias_melastigma
ENSPREG00000006864	raver1	77	88.372	ENSOGAG00000011071	RAVER1	95	49.378	Otolemur_garnettii
ENSPREG00000006864	raver1	65	88.372	ENSOARG00000015886	RAVER1	71	86.364	Ovis_aries
ENSPREG00000006864	raver1	77	88.372	ENSPPAG00000002611	RAVER1	71	88.372	Pan_paniscus
ENSPREG00000006864	raver1	78	88.372	ENSPPRG00000009912	RAVER1	71	88.372	Panthera_pardus
ENSPREG00000006864	raver1	77	88.372	ENSPTRG00000010466	RAVER1	71	88.372	Pan_troglodytes
ENSPREG00000006864	raver1	77	88.372	ENSPANG00000004122	RAVER1	71	88.372	Papio_anubis
ENSPREG00000006864	raver1	77	90.698	ENSPEMG00000016411	-	73	90.698	Peromyscus_maniculatus_bairdii
ENSPREG00000006864	raver1	78	93.023	ENSPCIG00000018695	-	97	54.130	Phascolarctos_cinereus
ENSPREG00000006864	raver1	100	87.769	ENSPFOG00000007016	raver1	100	88.575	Poecilia_formosa
ENSPREG00000006864	raver1	100	87.551	ENSPLAG00000020793	raver1	100	87.551	Poecilia_latipinna
ENSPREG00000006864	raver1	100	89.796	ENSPMEG00000011220	raver1	100	89.796	Poecilia_mexicana
ENSPREG00000006864	raver1	77	88.372	ENSPPYG00000010514	RAVER1	61	88.372	Pongo_abelii
ENSPREG00000006864	raver1	77	88.372	ENSPCOG00000026605	RAVER1	70	88.372	Propithecus_coquereli
ENSPREG00000006864	raver1	75	88.372	ENSPVAG00000003689	RAVER1	73	88.372	Pteropus_vampyrus
ENSPREG00000006864	raver1	100	73.961	ENSPNYG00000013284	raver1	100	75.069	Pundamilia_nyererei
ENSPREG00000006864	raver1	98	65.422	ENSPNAG00000015476	raver1	100	64.538	Pygocentrus_nattereri
ENSPREG00000006864	raver1	77	90.698	ENSRNOG00000020710	Raver1	74	90.698	Rattus_norvegicus
ENSPREG00000006864	raver1	77	88.372	ENSRBIG00000034702	RAVER1	71	88.372	Rhinopithecus_bieti
ENSPREG00000006864	raver1	77	88.372	ENSRROG00000031186	RAVER1	70	88.372	Rhinopithecus_roxellana
ENSPREG00000006864	raver1	92	51.977	ENSSBOG00000023423	RAVER1	95	52.119	Saimiri_boliviensis_boliviensis
ENSPREG00000006864	raver1	84	52.426	ENSSHAG00000008181	-	90	52.960	Sarcophilus_harrisii
ENSPREG00000006864	raver1	98	76.657	ENSSMAG00000004546	raver1	100	75.815	Scophthalmus_maximus
ENSPREG00000006864	raver1	98	78.393	ENSSDUG00000021063	raver1	100	77.959	Seriola_dumerili
ENSPREG00000006864	raver1	98	78.116	ENSSLDG00000014505	raver1	100	77.687	Seriola_lalandi_dorsalis
ENSPREG00000006864	raver1	98	78.670	ENSSPAG00000000688	raver1	100	78.367	Stegastes_partitus
ENSPREG00000006864	raver1	66	88.372	ENSSSCG00000013650	-	71	88.372	Sus_scrofa
ENSPREG00000006864	raver1	98	70.994	ENSTRUG00000025641	raver1	100	70.692	Takifugu_rubripes
ENSPREG00000006864	raver1	65	88.372	ENSTTRG00000009552	RAVER1	73	88.372	Tursiops_truncatus
ENSPREG00000006864	raver1	78	88.372	ENSUAMG00000020385	RAVER1	71	88.372	Ursus_americanus
ENSPREG00000006864	raver1	92	50.000	ENSVVUG00000028976	RAVER1	95	51.257	Vulpes_vulpes
ENSPREG00000006864	raver1	89	49.408	ENSXETG00000011622	raver1	94	49.408	Xenopus_tropicalis
ENSPREG00000006864	raver1	100	87.619	ENSXCOG00000016368	raver1	100	87.619	Xiphophorus_couchianus
ENSPREG00000006864	raver1	100	87.347	ENSXMAG00000000217	raver1	100	87.347	Xiphophorus_maculatus