EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000006885 (Gene tree)
Gene ID: 103479085
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 4308 bases
Position: chrLG17:6016958-6021265
Accession: 103479085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000010107	S4	PF01479.25	1.3e-08	1	1
ENSPREP00000010118	Ribosomal_S4	PF00163.19	4e-10	1	1
ENSPREP00000010107	Ribosomal_S4	PF00163.19	5.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010234	-	540	-	ENSPREP00000010118	179 (aa)	-	-
ENSPRET00000010223	-	552	XM_008433314	ENSPREP00000010107	183 (aa)	XP_008431536	UPI0004A358F3

Gene Model

Click here to download ENSPREG00000006885's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000006885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000006885	imp3	100	92.350	ENSAPOG00000014720	imp3	100	92.350	Acanthochromis_polyacanthus
ENSPREG00000006885	imp3	100	70.109	ENSAMEG00000019247	IMP3	100	70.109	Ailuropoda_melanoleuca
ENSPREG00000006885	imp3	98	92.737	ENSACIG00000022070	imp3	96	92.737	Amphilophus_citrinellus
ENSPREG00000006885	imp3	100	91.803	ENSAOCG00000015761	imp3	100	91.803	Amphiprion_ocellaris
ENSPREG00000006885	imp3	100	91.257	ENSAPEG00000005250	imp3	100	91.257	Amphiprion_percula
ENSPREG00000006885	imp3	100	94.536	ENSATEG00000020021	imp3	100	94.536	Anabas_testudineus
ENSPREG00000006885	imp3	100	66.310	ENSACAG00000016259	IMP3	100	66.310	Anolis_carolinensis
ENSPREG00000006885	imp3	99	59.341	ENSANAG00000036874	-	99	59.341	Aotus_nancymaae
ENSPREG00000006885	imp3	100	69.565	ENSANAG00000016669	-	100	69.565	Aotus_nancymaae
ENSPREG00000006885	imp3	100	94.536	ENSACLG00000009929	imp3	100	94.536	Astatotilapia_calliptera
ENSPREG00000006885	imp3	96	87.429	ENSAMXG00000018715	imp3	99	87.429	Astyanax_mexicanus
ENSPREG00000006885	imp3	99	52.747	WBGene00016740	C48B6.2	99	52.747	Caenorhabditis_elegans
ENSPREG00000006885	imp3	100	69.565	ENSCJAG00000044585	IMP3	100	69.565	Callithrix_jacchus
ENSPREG00000006885	imp3	100	66.848	ENSCAFG00000018039	IMP3	82	66.848	Canis_familiaris
ENSPREG00000006885	imp3	100	55.435	ENSCAFG00020006737	-	100	55.978	Canis_lupus_dingo
ENSPREG00000006885	imp3	100	66.848	ENSCAFG00020003760	-	100	66.848	Canis_lupus_dingo
ENSPREG00000006885	imp3	100	69.565	ENSCHIG00000006295	IMP3	100	69.565	Capra_hircus
ENSPREG00000006885	imp3	100	69.022	ENSTSYG00000005503	IMP3	100	69.022	Carlito_syrichta
ENSPREG00000006885	imp3	100	69.565	ENSCPOG00000012016	IMP3	100	69.565	Cavia_porcellus
ENSPREG00000006885	imp3	98	60.000	ENSCCAG00000023378	-	99	58.621	Cebus_capucinus
ENSPREG00000006885	imp3	100	69.565	ENSCCAG00000002712	-	100	69.565	Cebus_capucinus
ENSPREG00000006885	imp3	100	69.022	ENSCATG00000015188	IMP3	100	69.022	Cercocebus_atys
ENSPREG00000006885	imp3	100	69.022	ENSCSAG00000019732	IMP3	100	69.022	Chlorocebus_sabaeus
ENSPREG00000006885	imp3	100	69.565	ENSCHOG00000012046	IMP3	100	69.565	Choloepus_hoffmanni
ENSPREG00000006885	imp3	100	63.784	ENSCPBG00000021662	IMP3	100	63.784	Chrysemys_picta_bellii
ENSPREG00000006885	imp3	99	64.641	ENSCING00000004233	-	100	64.641	Ciona_intestinalis
ENSPREG00000006885	imp3	99	66.298	ENSCSAVG00000000698	-	100	66.298	Ciona_savignyi
ENSPREG00000006885	imp3	100	69.022	ENSCANG00000018342	IMP3	100	69.022	Colobus_angolensis_palliatus
ENSPREG00000006885	imp3	100	67.935	ENSCGRG00001001326	Imp3	100	67.935	Cricetulus_griseus_chok1gshd
ENSPREG00000006885	imp3	100	67.935	ENSCGRG00000018907	Imp3	100	67.935	Cricetulus_griseus_crigri
ENSPREG00000006885	imp3	99	89.011	ENSCSEG00000017200	imp3	99	89.011	Cynoglossus_semilaevis
ENSPREG00000006885	imp3	100	83.684	ENSCVAG00000019511	imp3	100	83.684	Cyprinodon_variegatus
ENSPREG00000006885	imp3	100	87.432	ENSDARG00000115266	imp3	100	87.574	Danio_rerio
ENSPREG00000006885	imp3	100	68.478	ENSDNOG00000015787	IMP3	81	68.478	Dasypus_novemcinctus
ENSPREG00000006885	imp3	100	68.478	ENSDORG00000029301	Imp3	100	68.478	Dipodomys_ordii
ENSPREG00000006885	imp3	99	61.326	FBgn0034232	CG4866	100	61.326	Drosophila_melanogaster
ENSPREG00000006885	imp3	100	69.565	ENSETEG00000004278	IMP3	100	69.565	Echinops_telfairi
ENSPREG00000006885	imp3	99	71.823	ENSEBUG00000002343	imp3	99	71.823	Eptatretus_burgeri
ENSPREG00000006885	imp3	100	68.478	ENSEASG00005015693	IMP3	100	68.478	Equus_asinus_asinus
ENSPREG00000006885	imp3	100	69.022	ENSECAG00000015786	IMP3	100	69.022	Equus_caballus
ENSPREG00000006885	imp3	100	87.432	ENSELUG00000023264	imp3	100	87.432	Esox_lucius
ENSPREG00000006885	imp3	100	69.022	ENSFCAG00000040328	IMP3	100	69.022	Felis_catus
ENSPREG00000006885	imp3	71	53.435	ENSFALG00000014811	IMP3	99	55.725	Ficedula_albicollis
ENSPREG00000006885	imp3	100	69.565	ENSFDAG00000018422	IMP3	100	69.565	Fukomys_damarensis
ENSPREG00000006885	imp3	100	95.082	ENSFHEG00000016954	imp3	100	95.082	Fundulus_heteroclitus
ENSPREG00000006885	imp3	100	87.432	ENSGMOG00000018162	imp3	100	87.432	Gadus_morhua
ENSPREG00000006885	imp3	100	54.595	ENSGALG00000040238	IMP3	100	56.216	Gallus_gallus
ENSPREG00000006885	imp3	100	98.907	ENSGAFG00000007425	imp3	100	98.907	Gambusia_affinis
ENSPREG00000006885	imp3	100	89.071	ENSGACG00000015998	imp3	100	89.071	Gasterosteus_aculeatus
ENSPREG00000006885	imp3	100	62.703	ENSGAGG00000008163	IMP3	100	62.703	Gopherus_agassizii
ENSPREG00000006885	imp3	100	69.022	ENSGGOG00000025122	IMP3	100	69.022	Gorilla_gorilla
ENSPREG00000006885	imp3	100	95.082	ENSHBUG00000018453	imp3	100	95.082	Haplochromis_burtoni
ENSPREG00000006885	imp3	100	69.022	ENSHGLG00000019824	IMP3	100	69.022	Heterocephalus_glaber_female
ENSPREG00000006885	imp3	100	69.022	ENSHGLG00100020660	IMP3	100	69.022	Heterocephalus_glaber_male
ENSPREG00000006885	imp3	100	90.710	ENSHCOG00000020565	imp3	100	90.710	Hippocampus_comes
ENSPREG00000006885	imp3	100	85.246	ENSIPUG00000013142	imp3	100	85.246	Ictalurus_punctatus
ENSPREG00000006885	imp3	100	69.565	ENSSTOG00000030143	IMP3	100	69.565	Ictidomys_tridecemlineatus
ENSPREG00000006885	imp3	100	92.350	ENSKMAG00000001956	imp3	100	92.350	Kryptolebias_marmoratus
ENSPREG00000006885	imp3	100	91.257	ENSLBEG00000008178	imp3	100	91.257	Labrus_bergylta
ENSPREG00000006885	imp3	100	81.421	ENSLACG00000022148	imp3	100	81.421	Latimeria_chalumnae
ENSPREG00000006885	imp3	100	83.607	ENSLOCG00000010237	imp3	100	83.607	Lepisosteus_oculatus
ENSPREG00000006885	imp3	99	69.231	ENSLAFG00000004425	IMP3	99	69.231	Loxodonta_africana
ENSPREG00000006885	imp3	100	69.022	ENSMFAG00000008867	IMP3	100	69.022	Macaca_fascicularis
ENSPREG00000006885	imp3	100	69.022	ENSMMUG00000016103	IMP3	100	69.022	Macaca_mulatta
ENSPREG00000006885	imp3	100	69.022	ENSMNEG00000026328	IMP3	100	69.022	Macaca_nemestrina
ENSPREG00000006885	imp3	100	94.536	ENSMAMG00000003215	imp3	100	94.536	Mastacembelus_armatus
ENSPREG00000006885	imp3	100	94.536	ENSMZEG00005005544	imp3	100	94.536	Maylandia_zebra
ENSPREG00000006885	imp3	100	68.478	ENSMAUG00000010279	Imp3	100	68.478	Mesocricetus_auratus
ENSPREG00000006885	imp3	100	69.022	ENSMICG00000044149	IMP3	100	69.022	Microcebus_murinus
ENSPREG00000006885	imp3	100	69.022	ENSMOCG00000008647	Imp3	100	69.022	Microtus_ochrogaster
ENSPREG00000006885	imp3	96	92.571	ENSMMOG00000018117	imp3	84	92.571	Mola_mola
ENSPREG00000006885	imp3	100	67.391	ENSMODG00000025193	IMP3	100	67.391	Monodelphis_domestica
ENSPREG00000006885	imp3	100	93.989	ENSMALG00000006505	imp3	100	93.989	Monopterus_albus
ENSPREG00000006885	imp3	100	67.935	MGP_CAROLIEiJ_G0032258	Imp3	100	67.935	Mus_caroli
ENSPREG00000006885	imp3	100	67.935	ENSMUSG00000032288	Imp3	100	67.935	Mus_musculus
ENSPREG00000006885	imp3	100	67.935	MGP_PahariEiJ_G0015125	Imp3	100	67.935	Mus_pahari
ENSPREG00000006885	imp3	100	67.935	MGP_SPRETEiJ_G0033398	Imp3	100	67.935	Mus_spretus
ENSPREG00000006885	imp3	100	68.478	ENSMPUG00000020147	IMP3	100	68.478	Mustela_putorius_furo
ENSPREG00000006885	imp3	100	69.022	ENSMLUG00000014032	IMP3	100	69.022	Myotis_lucifugus
ENSPREG00000006885	imp3	100	67.391	ENSNGAG00000017248	Imp3	100	67.391	Nannospalax_galili
ENSPREG00000006885	imp3	100	94.536	ENSNBRG00000004060	imp3	100	94.536	Neolamprologus_brichardi
ENSPREG00000006885	imp3	100	69.022	ENSOPRG00000015906	-	100	69.022	Ochotona_princeps
ENSPREG00000006885	imp3	100	69.565	ENSODEG00000020194	IMP3	100	69.565	Octodon_degus
ENSPREG00000006885	imp3	100	93.443	ENSONIG00000010661	imp3	100	93.443	Oreochromis_niloticus
ENSPREG00000006885	imp3	100	69.022	ENSOCUG00000004690	IMP3	100	69.022	Oryctolagus_cuniculus
ENSPREG00000006885	imp3	100	91.257	ENSORLG00000004484	imp3	100	91.257	Oryzias_latipes
ENSPREG00000006885	imp3	100	91.257	ENSORLG00020003771	imp3	100	91.257	Oryzias_latipes_hni
ENSPREG00000006885	imp3	100	90.710	ENSORLG00015006933	imp3	100	90.710	Oryzias_latipes_hsok
ENSPREG00000006885	imp3	100	91.257	ENSOMEG00000016160	imp3	100	91.257	Oryzias_melastigma
ENSPREG00000006885	imp3	100	69.022	ENSOGAG00000004917	IMP3	100	69.022	Otolemur_garnettii
ENSPREG00000006885	imp3	100	69.022	ENSPPAG00000009241	IMP3	100	69.022	Pan_paniscus
ENSPREG00000006885	imp3	100	69.022	ENSPPRG00000018701	IMP3	100	69.022	Panthera_pardus
ENSPREG00000006885	imp3	100	69.022	ENSPTRG00000052235	IMP3	100	69.022	Pan_troglodytes
ENSPREG00000006885	imp3	100	69.022	ENSPANG00000013668	IMP3	100	69.022	Papio_anubis
ENSPREG00000006885	imp3	100	86.885	ENSPKIG00000007169	imp3	100	86.885	Paramormyrops_kingsleyae
ENSPREG00000006885	imp3	100	79.570	ENSPMGG00000009379	imp3	100	79.570	Periophthalmus_magnuspinnatus
ENSPREG00000006885	imp3	100	67.935	ENSPEMG00000013003	Imp3	100	67.935	Peromyscus_maniculatus_bairdii
ENSPREG00000006885	imp3	100	98.361	ENSPFOG00000016529	imp3	100	98.361	Poecilia_formosa
ENSPREG00000006885	imp3	100	98.907	ENSPLAG00000013831	imp3	100	98.907	Poecilia_latipinna
ENSPREG00000006885	imp3	100	97.814	ENSPMEG00000000797	imp3	100	97.814	Poecilia_mexicana
ENSPREG00000006885	imp3	100	69.565	ENSPPYG00000006664	IMP3	100	69.565	Pongo_abelii
ENSPREG00000006885	imp3	99	69.780	ENSPCAG00000006920	IMP3	99	69.780	Procavia_capensis
ENSPREG00000006885	imp3	100	69.022	ENSPCOG00000012367	IMP3	100	69.022	Propithecus_coquereli
ENSPREG00000006885	imp3	100	69.565	ENSPVAG00000010036	IMP3	100	69.565	Pteropus_vampyrus
ENSPREG00000006885	imp3	100	94.536	ENSPNYG00000000324	imp3	100	94.536	Pundamilia_nyererei
ENSPREG00000006885	imp3	100	89.617	ENSPNAG00000017113	imp3	100	89.617	Pygocentrus_nattereri
ENSPREG00000006885	imp3	100	67.935	ENSRNOG00000017460	Imp3	100	67.935	Rattus_norvegicus
ENSPREG00000006885	imp3	100	68.478	ENSRBIG00000024522	IMP3	100	68.478	Rhinopithecus_bieti
ENSPREG00000006885	imp3	100	68.478	ENSRROG00000024157	IMP3	100	68.478	Rhinopithecus_roxellana
ENSPREG00000006885	imp3	99	54.396	YHR148W	-	99	54.396	Saccharomyces_cerevisiae
ENSPREG00000006885	imp3	99	60.440	ENSSBOG00000026404	-	99	60.440	Saimiri_boliviensis_boliviensis
ENSPREG00000006885	imp3	100	69.565	ENSSBOG00000006542	-	100	69.565	Saimiri_boliviensis_boliviensis
ENSPREG00000006885	imp3	99	65.934	ENSSHAG00000006200	IMP3	99	65.934	Sarcophilus_harrisii
ENSPREG00000006885	imp3	100	87.432	ENSSFOG00015012483	imp3	100	87.432	Scleropages_formosus
ENSPREG00000006885	imp3	100	93.443	ENSSMAG00000007865	imp3	100	93.443	Scophthalmus_maximus
ENSPREG00000006885	imp3	100	94.536	ENSSDUG00000010594	imp3	100	94.536	Seriola_dumerili
ENSPREG00000006885	imp3	100	94.536	ENSSLDG00000015587	imp3	100	94.536	Seriola_lalandi_dorsalis
ENSPREG00000006885	imp3	100	69.565	ENSSARG00000009657	IMP3	100	69.565	Sorex_araneus
ENSPREG00000006885	imp3	100	91.257	ENSSPAG00000002088	imp3	100	91.257	Stegastes_partitus
ENSPREG00000006885	imp3	100	54.595	ENSTGUG00000013228	IMP3	100	56.216	Taeniopygia_guttata
ENSPREG00000006885	imp3	99	91.758	ENSTRUG00000025783	imp3	99	91.758	Takifugu_rubripes
ENSPREG00000006885	imp3	100	69.565	ENSUAMG00000022724	IMP3	100	69.565	Ursus_americanus
ENSPREG00000006885	imp3	100	69.565	ENSUMAG00000003736	IMP3	100	69.565	Ursus_maritimus
ENSPREG00000006885	imp3	100	67.391	ENSVVUG00000019589	IMP3	100	67.391	Vulpes_vulpes
ENSPREG00000006885	imp3	96	98.286	ENSXCOG00000007392	imp3	96	98.286	Xiphophorus_couchianus
ENSPREG00000006885	imp3	100	98.361	ENSXMAG00000023049	imp3	100	98.361	Xiphophorus_maculatus