EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000007017 (Gene tree)
Gene ID: 103479386
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1687 bases
Position: chrLG2:16946003-16947689
Accession: 103479386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000010278	MMR_HSR1	PF01926.23	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010395	-	705	XM_008433774	ENSPREP00000010278	234 (aa)	XP_008431996	UPI0004A39E0B

Gene Model

Click here to download ENSPREG00000007017's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000007017	zgc:101559	85	35.354	ENSPREG00000019341	hrasb	97	35.354
ENSPREG00000007017	zgc:101559	74	37.572	ENSPREG00000017324	rab11al	79	37.572
ENSPREG00000007017	zgc:101559	67	41.667	ENSPREG00000014888	rab2a	73	41.667
ENSPREG00000007017	zgc:101559	72	45.833	ENSPREG00000004889	-	78	45.833
ENSPREG00000007017	zgc:101559	86	35.885	ENSPREG00000012148	RAB7A	98	35.885
ENSPREG00000007017	zgc:101559	74	46.821	ENSPREG00000017517	zgc:171927	78	46.821
ENSPREG00000007017	zgc:101559	63	35.135	ENSPREG00000012803	rhebl1	79	35.135
ENSPREG00000007017	zgc:101559	63	42.857	ENSPREG00000010284	rab15	68	42.857
ENSPREG00000007017	zgc:101559	74	39.306	ENSPREG00000006336	-	78	39.306
ENSPREG00000007017	zgc:101559	66	47.097	ENSPREG00000009597	-	72	47.097
ENSPREG00000007017	zgc:101559	72	47.024	ENSPREG00000020321	rab1ab	80	47.024
ENSPREG00000007017	zgc:101559	71	41.212	ENSPREG00000006119	rab25a	80	42.748
ENSPREG00000007017	zgc:101559	83	37.186	ENSPREG00000015480	rab6ba	95	37.186
ENSPREG00000007017	zgc:101559	64	37.908	ENSPREG00000006970	rab9b	69	37.908
ENSPREG00000007017	zgc:101559	74	38.728	ENSPREG00000006357	rab11ba	61	38.728
ENSPREG00000007017	zgc:101559	70	41.818	ENSPREG00000009813	rab34b	64	41.818
ENSPREG00000007017	zgc:101559	78	38.462	ENSPREG00000009605	rab11a	84	38.462
ENSPREG00000007017	zgc:101559	63	42.568	ENSPREG00000013962	rab42a	67	42.568
ENSPREG00000007017	zgc:101559	64	42.953	ENSPREG00000021505	rab6a	71	42.953
ENSPREG00000007017	zgc:101559	63	41.497	ENSPREG00000017337	rab25b	69	41.497
ENSPREG00000007017	zgc:101559	77	39.891	ENSPREG00000017487	rab12	73	39.891
ENSPREG00000007017	zgc:101559	81	61.421	ENSPREG00000000880	rab33ba	83	61.421
ENSPREG00000007017	zgc:101559	63	44.218	ENSPREG00000019783	RAB15	69	44.218
ENSPREG00000007017	zgc:101559	54	44.444	ENSPREG00000008951	rab34a	51	44.444
ENSPREG00000007017	zgc:101559	70	46.341	ENSPREG00000005323	si:dkey-16l2.16	76	46.341
ENSPREG00000007017	zgc:101559	70	43.293	ENSPREG00000017567	rab13	80	43.293
ENSPREG00000007017	zgc:101559	64	41.611	ENSPREG00000009535	RAB41	70	41.611
ENSPREG00000007017	zgc:101559	74	39.884	ENSPREG00000014269	rab11bb	78	39.884
ENSPREG00000007017	zgc:101559	72	46.429	ENSPREG00000003616	rab1ba	81	46.429
ENSPREG00000007017	zgc:101559	85	32.227	ENSPREG00000010154	rab4a	97	32.227
ENSPREG00000007017	zgc:101559	71	39.394	ENSPREG00000022167	-	79	40.000
ENSPREG00000007017	zgc:101559	71	47.904	ENSPREG00000014634	rab30	80	47.904
ENSPREG00000007017	zgc:101559	67	32.298	ENSPREG00000019386	rasl11b	65	32.298
ENSPREG00000007017	zgc:101559	66	35.032	ENSPREG00000012522	-	78	35.032
ENSPREG00000007017	zgc:101559	93	57.339	ENSPREG00000003221	rab33a	65	56.951
ENSPREG00000007017	zgc:101559	65	36.538	ENSPREG00000022241	si:dkey-13a21.4	75	36.538
ENSPREG00000007017	zgc:101559	51	30.709	ENSPREG00000004992	arl8a	61	30.709
ENSPREG00000007017	zgc:101559	63	40.816	ENSPREG00000005923	rab18a	59	40.816
ENSPREG00000007017	zgc:101559	51	33.613	ENSPREG00000016664	rap2b	94	34.586
ENSPREG00000007017	zgc:101559	66	34.395	ENSPREG00000001832	rab9a	77	34.395
ENSPREG00000007017	zgc:101559	67	47.170	ENSPREG00000007129	RAB39B	74	47.170
ENSPREG00000007017	zgc:101559	78	39.175	ENSPREG00000010920	rab22a	96	39.175
ENSPREG00000007017	zgc:101559	76	30.220	ENSPREG00000010228	dnajc27	92	30.220
ENSPREG00000007017	zgc:101559	71	38.095	ENSPREG00000017344	-	75	38.095
ENSPREG00000007017	zgc:101559	74	31.792	ENSPREG00000010752	rheb	93	31.792
ENSPREG00000007017	zgc:101559	72	35.795	ENSPREG00000006055	rasl11a	68	35.795
ENSPREG00000007017	zgc:101559	85	48.325	ENSPREG00000001864	-	90	48.325
ENSPREG00000007017	zgc:101559	73	39.181	ENSPREG00000010146	rab5c	75	39.181
ENSPREG00000007017	zgc:101559	63	31.757	ENSPREG00000014761	rabl2	70	31.757
ENSPREG00000007017	zgc:101559	67	36.943	ENSPREG00000018287	KRAS	97	34.694
ENSPREG00000007017	zgc:101559	65	35.669	ENSPREG00000020276	RAB29	75	35.669
ENSPREG00000007017	zgc:101559	69	31.677	ENSPREG00000016102	si:ch73-116o1.2	81	32.948
ENSPREG00000007017	zgc:101559	58	35.294	ENSPREG00000022509	rab23	71	35.811
ENSPREG00000007017	zgc:101559	86	35.885	ENSPREG00000017750	RAB7A	98	35.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007017	zgc:101559	100	84.188	ENSAPOG00000007503	zgc:101559	100	84.188	Acanthochromis_polyacanthus
ENSPREG00000007017	zgc:101559	90	87.143	ENSACIG00000021459	zgc:101559	92	87.143	Amphilophus_citrinellus
ENSPREG00000007017	zgc:101559	100	85.470	ENSAOCG00000024675	zgc:101559	100	85.470	Amphiprion_ocellaris
ENSPREG00000007017	zgc:101559	100	85.470	ENSAPEG00000005176	zgc:101559	100	85.470	Amphiprion_percula
ENSPREG00000007017	zgc:101559	100	83.333	ENSATEG00000007761	zgc:101559	100	83.333	Anabas_testudineus
ENSPREG00000007017	zgc:101559	99	84.979	ENSACLG00000027006	zgc:101559	99	84.979	Astatotilapia_calliptera
ENSPREG00000007017	zgc:101559	99	72.961	ENSAMXG00000040460	zgc:101559	94	72.961	Astyanax_mexicanus
ENSPREG00000007017	zgc:101559	100	78.205	ENSCSEG00000006243	zgc:101559	100	78.205	Cynoglossus_semilaevis
ENSPREG00000007017	zgc:101559	100	93.162	ENSCVAG00000019227	zgc:101559	100	93.162	Cyprinodon_variegatus
ENSPREG00000007017	zgc:101559	100	73.617	ENSDARG00000003257	zgc:101559	100	73.617	Danio_rerio
ENSPREG00000007017	zgc:101559	100	91.026	ENSFHEG00000011483	zgc:101559	100	91.026	Fundulus_heteroclitus
ENSPREG00000007017	zgc:101559	91	80.189	ENSGMOG00000011665	zgc:101559	99	80.189	Gadus_morhua
ENSPREG00000007017	zgc:101559	100	95.299	ENSGAFG00000021202	zgc:101559	100	95.299	Gambusia_affinis
ENSPREG00000007017	zgc:101559	91	81.132	ENSGACG00000001725	zgc:101559	91	81.132	Gasterosteus_aculeatus
ENSPREG00000007017	zgc:101559	100	84.615	ENSHBUG00000007827	zgc:101559	100	84.615	Haplochromis_burtoni
ENSPREG00000007017	zgc:101559	100	74.684	ENSHCOG00000009133	zgc:101559	100	76.471	Hippocampus_comes
ENSPREG00000007017	zgc:101559	92	71.759	ENSIPUG00000022394	zgc:101559	93	71.759	Ictalurus_punctatus
ENSPREG00000007017	zgc:101559	100	82.553	ENSKMAG00000002862	zgc:101559	100	82.553	Kryptolebias_marmoratus
ENSPREG00000007017	zgc:101559	100	82.906	ENSLBEG00000025798	zgc:101559	100	82.906	Labrus_bergylta
ENSPREG00000007017	zgc:101559	85	67.662	ENSLACG00000011557	zgc:101559	87	67.662	Latimeria_chalumnae
ENSPREG00000007017	zgc:101559	100	69.658	ENSLOCG00000005904	zgc:101559	99	69.658	Lepisosteus_oculatus
ENSPREG00000007017	zgc:101559	100	83.333	ENSMAMG00000017431	zgc:101559	100	83.333	Mastacembelus_armatus
ENSPREG00000007017	zgc:101559	100	84.615	ENSMZEG00005021778	zgc:101559	100	84.615	Maylandia_zebra
ENSPREG00000007017	zgc:101559	100	80.769	ENSMMOG00000019779	zgc:101559	100	80.769	Mola_mola
ENSPREG00000007017	zgc:101559	100	79.915	ENSMALG00000003712	zgc:101559	100	79.915	Monopterus_albus
ENSPREG00000007017	zgc:101559	100	83.761	ENSNBRG00000002684	zgc:101559	100	83.761	Neolamprologus_brichardi
ENSPREG00000007017	zgc:101559	100	84.615	ENSONIG00000006715	-	100	84.615	Oreochromis_niloticus
ENSPREG00000007017	zgc:101559	100	82.906	ENSORLG00000030642	zgc:101559	100	82.906	Oryzias_latipes
ENSPREG00000007017	zgc:101559	100	82.051	ENSORLG00020012685	zgc:101559	100	82.051	Oryzias_latipes_hni
ENSPREG00000007017	zgc:101559	100	82.479	ENSORLG00015016047	zgc:101559	100	82.479	Oryzias_latipes_hsok
ENSPREG00000007017	zgc:101559	100	84.615	ENSOMEG00000013128	zgc:101559	100	84.615	Oryzias_melastigma
ENSPREG00000007017	zgc:101559	86	74.752	ENSPKIG00000013397	zgc:101559	85	74.752	Paramormyrops_kingsleyae
ENSPREG00000007017	zgc:101559	100	97.436	ENSPFOG00000009101	-	100	97.436	Poecilia_formosa
ENSPREG00000007017	zgc:101559	100	97.009	ENSPLAG00000020627	zgc:101559	100	97.009	Poecilia_latipinna
ENSPREG00000007017	zgc:101559	100	97.863	ENSPMEG00000010152	zgc:101559	100	97.863	Poecilia_mexicana
ENSPREG00000007017	zgc:101559	100	84.615	ENSPNYG00000012922	zgc:101559	100	84.615	Pundamilia_nyererei
ENSPREG00000007017	zgc:101559	99	73.276	ENSPNAG00000017856	zgc:101559	100	73.276	Pygocentrus_nattereri
ENSPREG00000007017	zgc:101559	85	76.500	ENSSFOG00015006175	zgc:101559	86	76.500	Scleropages_formosus
ENSPREG00000007017	zgc:101559	99	81.116	ENSSMAG00000002229	zgc:101559	99	81.116	Scophthalmus_maximus
ENSPREG00000007017	zgc:101559	100	86.752	ENSSDUG00000008151	zgc:101559	100	86.752	Seriola_dumerili
ENSPREG00000007017	zgc:101559	100	86.752	ENSSLDG00000019214	zgc:101559	100	86.752	Seriola_lalandi_dorsalis
ENSPREG00000007017	zgc:101559	100	85.897	ENSSPAG00000006404	zgc:101559	100	85.897	Stegastes_partitus
ENSPREG00000007017	zgc:101559	100	80.342	ENSTRUG00000009903	zgc:101559	100	80.342	Takifugu_rubripes
ENSPREG00000007017	zgc:101559	93	79.817	ENSTNIG00000015000	zgc:101559	93	79.452	Tetraodon_nigroviridis
ENSPREG00000007017	zgc:101559	100	97.436	ENSXCOG00000018683	zgc:101559	100	97.436	Xiphophorus_couchianus
ENSPREG00000007017	zgc:101559	100	96.581	ENSXMAG00000011171	zgc:101559	100	96.581	Xiphophorus_maculatus