EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000007170 (Gene tree)
Gene ID: 103479097
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7510 bases
Position: chrLG17:6188476-6195985
Accession: 103479097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000010527	RRM_1	PF00076.22	6.7e-42	1	4
ENSPREP00000010527	RRM_1	PF00076.22	6.7e-42	2	4
ENSPREP00000010527	RRM_1	PF00076.22	6.7e-42	3	4
ENSPREP00000010527	RRM_1	PF00076.22	6.7e-42	4	4
ENSPREP00000010509	RRM_1	PF00076.22	9.5e-42	1	4
ENSPREP00000010509	RRM_1	PF00076.22	9.5e-42	2	4
ENSPREP00000010509	RRM_1	PF00076.22	9.5e-42	3	4
ENSPREP00000010509	RRM_1	PF00076.22	9.5e-42	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010631	-	1530	XM_008433330	ENSPREP00000010509	509 (aa)	XP_008431552	UPI0004A24C64
ENSPRET00000010650	-	1792	XM_008433332	ENSPREP00000010527	475 (aa)	XP_008431554	-

Gene Model

Click here to download ENSPREG00000007170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007170's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007170	-	82	47.079	ENSACIG00000021941	-	85	47.079	Amphilophus_citrinellus
ENSPREG00000007170	-	82	46.173	ENSACLG00000009613	-	91	46.134	Astatotilapia_calliptera
ENSPREG00000007170	-	87	47.529	ENSCSEG00000017388	-	73	48.878	Cynoglossus_semilaevis
ENSPREG00000007170	-	94	63.103	ENSFHEG00000017265	-	85	69.077	Fundulus_heteroclitus
ENSPREG00000007170	-	81	38.046	ENSGMOG00000017831	-	100	38.614	Gadus_morhua
ENSPREG00000007170	-	95	88.272	ENSGAFG00000018408	-	95	89.507	Gambusia_affinis
ENSPREG00000007170	-	82	45.663	ENSHBUG00000006683	-	92	45.876	Haplochromis_burtoni
ENSPREG00000007170	-	88	47.281	ENSHCOG00000020361	-	94	47.794	Hippocampus_comes
ENSPREG00000007170	-	91	59.397	ENSKMAG00000003154	-	87	60.337	Kryptolebias_marmoratus
ENSPREG00000007170	-	82	45.663	ENSMZEG00005005300	-	92	45.876	Maylandia_zebra
ENSPREG00000007170	-	83	48.861	ENSMMOG00000018095	-	87	49.476	Mola_mola
ENSPREG00000007170	-	88	51.290	ENSMALG00000006207	-	86	46.429	Monopterus_albus
ENSPREG00000007170	-	85	45.679	ENSPMGG00000013705	-	90	46.753	Periophthalmus_magnuspinnatus
ENSPREG00000007170	-	92	91.737	ENSPFOG00000016767	-	95	91.737	Poecilia_formosa
ENSPREG00000007170	-	95	90.835	ENSPLAG00000000597	-	99	90.835	Poecilia_latipinna
ENSPREG00000007170	-	95	91.770	ENSPMEG00000004046	-	95	92.934	Poecilia_mexicana
ENSPREG00000007170	-	82	47.194	ENSPNYG00000000391	-	92	47.423	Pundamilia_nyererei
ENSPREG00000007170	-	93	45.263	ENSTRUG00000023880	-	90	46.004	Takifugu_rubripes
ENSPREG00000007170	-	95	88.066	ENSXMAG00000004403	-	99	88.066	Xiphophorus_maculatus