EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000007231 (Gene tree)
Gene ID: 103473599
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3904 bases
Position: chrLG12:13785605-13789508
Accession: 103473599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000010639	PseudoU_synth_1	PF01416.20	2.3e-15	1	1
ENSPREP00000010657	PseudoU_synth_1	PF01416.20	3.1e-15	1	1
ENSPREP00000010647	PseudoU_synth_1	PF01416.20	3.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010764	-	1080	-	ENSPREP00000010639	359 (aa)	-	-
ENSPRET00000010772	-	1221	XM_008423954	ENSPREP00000010647	406 (aa)	XP_008422176	-
ENSPRET00000010782	-	1182	-	ENSPREP00000010657	393 (aa)	-	-

Gene Model

Click here to download ENSPREG00000007231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007231	pus1	98	68.644	ENSG00000177192	PUS1	91	69.516	Homo_sapiens
ENSPREG00000007231	pus1	99	86.630	ENSAPOG00000007254	pus1	94	83.838	Acanthochromis_polyacanthus
ENSPREG00000007231	pus1	92	71.125	ENSAMEG00000013715	PUS1	90	65.508	Ailuropoda_melanoleuca
ENSPREG00000007231	pus1	99	85.196	ENSACIG00000009169	pus1	95	82.278	Amphilophus_citrinellus
ENSPREG00000007231	pus1	99	87.465	ENSAOCG00000022207	pus1	94	85.101	Amphiprion_ocellaris
ENSPREG00000007231	pus1	99	87.187	ENSAPEG00000006039	pus1	99	85.422	Amphiprion_percula
ENSPREG00000007231	pus1	99	84.958	ENSATEG00000020688	pus1	100	83.376	Anabas_testudineus
ENSPREG00000007231	pus1	94	71.386	ENSACAG00000007367	PUS1	91	71.386	Anolis_carolinensis
ENSPREG00000007231	pus1	89	69.136	ENSANAG00000036192	PUS1	99	69.136	Aotus_nancymaae
ENSPREG00000007231	pus1	99	86.072	ENSACLG00000020868	pus1	100	84.143	Astatotilapia_calliptera
ENSPREG00000007231	pus1	99	77.933	ENSAMXG00000008710	pus1	89	73.454	Astyanax_mexicanus
ENSPREG00000007231	pus1	92	71.125	ENSBTAG00000012990	PUS1	91	65.668	Bos_taurus
ENSPREG00000007231	pus1	96	38.056	WBGene00004248	pus-1	85	38.268	Caenorhabditis_elegans
ENSPREG00000007231	pus1	71	68.504	ENSCJAG00000003720	PUS1	70	68.482	Callithrix_jacchus
ENSPREG00000007231	pus1	92	71.733	ENSCAFG00000006429	PUS1	87	69.341	Canis_familiaris
ENSPREG00000007231	pus1	92	71.733	ENSCAFG00020010737	PUS1	81	69.341	Canis_lupus_dingo
ENSPREG00000007231	pus1	92	71.429	ENSCHIG00000000487	PUS1	91	66.213	Capra_hircus
ENSPREG00000007231	pus1	99	68.908	ENSTSYG00000032605	PUS1	99	68.120	Carlito_syrichta
ENSPREG00000007231	pus1	83	71.572	ENSCAPG00000006421	PUS1	96	69.775	Cavia_aperea
ENSPREG00000007231	pus1	91	71.077	ENSCPOG00000001027	PUS1	81	68.208	Cavia_porcellus
ENSPREG00000007231	pus1	92	71.429	ENSCCAG00000015879	PUS1	90	68.405	Cebus_capucinus
ENSPREG00000007231	pus1	97	67.989	ENSCATG00000032870	PUS1	89	68.405	Cercocebus_atys
ENSPREG00000007231	pus1	91	70.462	ENSCLAG00000011689	PUS1	82	67.919	Chinchilla_lanigera
ENSPREG00000007231	pus1	97	68.272	ENSCSAG00000001879	PUS1	90	64.175	Chlorocebus_sabaeus
ENSPREG00000007231	pus1	87	71.338	ENSCPBG00000024715	PUS1	89	71.338	Chrysemys_picta_bellii
ENSPREG00000007231	pus1	91	45.872	ENSCING00000009426	-	87	45.872	Ciona_intestinalis
ENSPREG00000007231	pus1	89	43.887	ENSCSAVG00000003751	-	66	43.887	Ciona_savignyi
ENSPREG00000007231	pus1	98	61.017	ENSCANG00000035561	PUS1	89	62.006	Colobus_angolensis_palliatus
ENSPREG00000007231	pus1	71	30.314	ENSCGRG00001019842	Pus3	54	30.314	Cricetulus_griseus_chok1gshd
ENSPREG00000007231	pus1	97	68.481	ENSCGRG00001019592	Pus1	82	68.481	Cricetulus_griseus_chok1gshd
ENSPREG00000007231	pus1	97	68.481	ENSCGRG00000004048	Pus1	89	68.481	Cricetulus_griseus_crigri
ENSPREG00000007231	pus1	71	30.314	ENSCGRG00000010155	Pus3	54	30.314	Cricetulus_griseus_crigri
ENSPREG00000007231	pus1	99	78.212	ENSCSEG00000003629	pus1	94	75.253	Cynoglossus_semilaevis
ENSPREG00000007231	pus1	99	89.415	ENSCVAG00000001265	pus1	95	87.121	Cyprinodon_variegatus
ENSPREG00000007231	pus1	97	72.571	ENSDARG00000045562	pus1	97	75.368	Danio_rerio
ENSPREG00000007231	pus1	90	70.988	ENSDNOG00000045576	PUS1	99	66.462	Dasypus_novemcinctus
ENSPREG00000007231	pus1	90	68.111	ENSDORG00000011455	Pus1	99	68.111	Dipodomys_ordii
ENSPREG00000007231	pus1	92	47.892	FBgn0038811	PUS1	79	47.892	Drosophila_melanogaster
ENSPREG00000007231	pus1	90	73.292	ENSETEG00000019160	PUS1	84	69.679	Echinops_telfairi
ENSPREG00000007231	pus1	93	44.944	ENSEBUG00000000368	-	68	44.536	Eptatretus_burgeri
ENSPREG00000007231	pus1	94	69.322	ENSEASG00005016535	PUS1	80	68.497	Equus_asinus_asinus
ENSPREG00000007231	pus1	94	69.822	ENSECAG00000006965	PUS1	87	68.786	Equus_caballus
ENSPREG00000007231	pus1	99	77.437	ENSELUG00000010424	pus1	99	74.680	Esox_lucius
ENSPREG00000007231	pus1	92	71.429	ENSFCAG00000010780	PUS1	78	71.429	Felis_catus
ENSPREG00000007231	pus1	97	68.362	ENSFALG00000008273	PUS1	95	62.716	Ficedula_albicollis
ENSPREG00000007231	pus1	93	70.118	ENSFDAG00000012518	PUS1	88	66.849	Fukomys_damarensis
ENSPREG00000007231	pus1	99	91.365	ENSFHEG00000010504	pus1	95	89.673	Fundulus_heteroclitus
ENSPREG00000007231	pus1	99	76.816	ENSGMOG00000008143	pus1	99	73.846	Gadus_morhua
ENSPREG00000007231	pus1	99	70.141	ENSGALG00000002354	PUS1	93	67.192	Gallus_gallus
ENSPREG00000007231	pus1	99	95.929	ENSGAFG00000006578	pus1	95	95.960	Gambusia_affinis
ENSPREG00000007231	pus1	99	83.657	ENSGACG00000017566	pus1	99	82.864	Gasterosteus_aculeatus
ENSPREG00000007231	pus1	87	69.745	ENSGAGG00000016730	-	90	69.745	Gopherus_agassizii
ENSPREG00000007231	pus1	97	68.839	ENSGGOG00000009178	PUS1	87	69.325	Gorilla_gorilla
ENSPREG00000007231	pus1	99	86.630	ENSHBUG00000001316	pus1	100	84.655	Haplochromis_burtoni
ENSPREG00000007231	pus1	97	65.230	ENSHGLG00000016086	PUS1	93	63.187	Heterocephalus_glaber_female
ENSPREG00000007231	pus1	97	64.943	ENSHGLG00100019362	PUS1	93	62.912	Heterocephalus_glaber_male
ENSPREG00000007231	pus1	99	79.666	ENSHCOG00000014288	pus1	91	76.203	Hippocampus_comes
ENSPREG00000007231	pus1	97	79.714	ENSIPUG00000010387	pus1	91	77.534	Ictalurus_punctatus
ENSPREG00000007231	pus1	93	69.527	ENSSTOG00000011245	PUS1	86	65.054	Ictidomys_tridecemlineatus
ENSPREG00000007231	pus1	99	66.947	ENSJJAG00000000088	Pus1	85	66.944	Jaculus_jaculus
ENSPREG00000007231	pus1	99	82.730	ENSKMAG00000012702	pus1	94	80.457	Kryptolebias_marmoratus
ENSPREG00000007231	pus1	99	84.358	ENSLBEG00000002845	pus1	100	80.788	Labrus_bergylta
ENSPREG00000007231	pus1	90	57.099	ENSLACG00000016044	-	98	57.099	Latimeria_chalumnae
ENSPREG00000007231	pus1	95	70.294	ENSLACG00000018598	PUS1	94	66.755	Latimeria_chalumnae
ENSPREG00000007231	pus1	97	72.159	ENSLOCG00000006127	pus1	89	72.159	Lepisosteus_oculatus
ENSPREG00000007231	pus1	96	68.678	ENSLAFG00000028731	PUS1	99	65.761	Loxodonta_africana
ENSPREG00000007231	pus1	97	68.272	ENSMFAG00000041194	PUS1	89	68.712	Macaca_fascicularis
ENSPREG00000007231	pus1	92	71.084	ENSMMUG00000031463	PUS1	87	72.039	Macaca_mulatta
ENSPREG00000007231	pus1	97	68.272	ENSMNEG00000002814	PUS1	89	68.712	Macaca_nemestrina
ENSPREG00000007231	pus1	90	68.712	ENSMLEG00000043560	PUS1	99	68.827	Mandrillus_leucophaeus
ENSPREG00000007231	pus1	99	85.794	ENSMAMG00000007371	pus1	94	83.586	Mastacembelus_armatus
ENSPREG00000007231	pus1	99	86.351	ENSMZEG00005017746	pus1	94	84.010	Maylandia_zebra
ENSPREG00000007231	pus1	90	71.605	ENSMGAG00000001958	PUS1	98	71.605	Meleagris_gallopavo
ENSPREG00000007231	pus1	69	30.566	ENSMGAG00000000851	PUS3	63	30.566	Meleagris_gallopavo
ENSPREG00000007231	pus1	99	69.081	ENSMAUG00000001482	Pus1	86	67.847	Mesocricetus_auratus
ENSPREG00000007231	pus1	96	69.679	ENSMICG00000030980	PUS1	90	67.030	Microcebus_murinus
ENSPREG00000007231	pus1	99	67.787	ENSMOCG00000022311	Pus1	84	67.787	Microtus_ochrogaster
ENSPREG00000007231	pus1	99	81.127	ENSMMOG00000021022	pus1	99	77.835	Mola_mola
ENSPREG00000007231	pus1	96	68.222	ENSMODG00000015551	PUS1	82	65.847	Monodelphis_domestica
ENSPREG00000007231	pus1	99	85.475	ENSMALG00000013202	pus1	98	79.115	Monopterus_albus
ENSPREG00000007231	pus1	99	68.347	MGP_CAROLIEiJ_G0027551	Pus1	93	67.575	Mus_caroli
ENSPREG00000007231	pus1	99	68.347	ENSMUSG00000029507	Pus1	93	67.575	Mus_musculus
ENSPREG00000007231	pus1	99	68.347	MGP_PahariEiJ_G0024133	Pus1	92	68.132	Mus_pahari
ENSPREG00000007231	pus1	99	68.347	MGP_SPRETEiJ_G0028549	Pus1	93	67.575	Mus_spretus
ENSPREG00000007231	pus1	93	70.571	ENSMPUG00000002314	PUS1	88	69.253	Mustela_putorius_furo
ENSPREG00000007231	pus1	97	67.147	ENSMLUG00000015790	PUS1	99	65.278	Myotis_lucifugus
ENSPREG00000007231	pus1	97	69.122	ENSNGAG00000012976	Pus1	85	68.611	Nannospalax_galili
ENSPREG00000007231	pus1	99	87.151	ENSNBRG00000020502	pus1	99	86.327	Neolamprologus_brichardi
ENSPREG00000007231	pus1	98	66.667	ENSNLEG00000008505	PUS1	99	68.889	Nomascus_leucogenys
ENSPREG00000007231	pus1	91	63.914	ENSMEUG00000002825	PUS1	92	62.209	Notamacropus_eugenii
ENSPREG00000007231	pus1	91	62.385	ENSOPRG00000002701	-	91	60.345	Ochotona_princeps
ENSPREG00000007231	pus1	94	69.231	ENSODEG00000008248	PUS1	91	68.406	Octodon_degus
ENSPREG00000007231	pus1	99	85.714	ENSONIG00000003803	pus1	100	83.375	Oreochromis_niloticus
ENSPREG00000007231	pus1	97	68.195	ENSOANG00000010619	PUS1	93	61.975	Ornithorhynchus_anatinus
ENSPREG00000007231	pus1	90	72.671	ENSOCUG00000007310	PUS1	78	66.942	Oryctolagus_cuniculus
ENSPREG00000007231	pus1	99	83.287	ENSORLG00000010787	pus1	95	81.726	Oryzias_latipes
ENSPREG00000007231	pus1	99	83.565	ENSORLG00020011483	pus1	95	81.980	Oryzias_latipes_hni
ENSPREG00000007231	pus1	99	83.565	ENSORLG00015023012	pus1	99	81.959	Oryzias_latipes_hsok
ENSPREG00000007231	pus1	97	83.668	ENSOMEG00000022655	pus1	91	81.558	Oryzias_melastigma
ENSPREG00000007231	pus1	99	67.978	ENSOGAG00000008720	PUS1	95	67.030	Otolemur_garnettii
ENSPREG00000007231	pus1	92	70.909	ENSOARG00000013316	PUS1	88	63.542	Ovis_aries
ENSPREG00000007231	pus1	98	68.927	ENSPPAG00000040971	PUS1	87	69.325	Pan_paniscus
ENSPREG00000007231	pus1	92	71.429	ENSPPRG00000015456	PUS1	83	71.429	Panthera_pardus
ENSPREG00000007231	pus1	91	71.472	ENSPTIG00000004201	PUS1	85	71.646	Panthera_tigris_altaica
ENSPREG00000007231	pus1	98	68.927	ENSPTRG00000005643	PUS1	87	69.325	Pan_troglodytes
ENSPREG00000007231	pus1	97	68.272	ENSPANG00000000376	PUS1	89	68.712	Papio_anubis
ENSPREG00000007231	pus1	97	68.555	ENSPKIG00000019369	pus1	89	65.063	Paramormyrops_kingsleyae
ENSPREG00000007231	pus1	96	69.565	ENSPSIG00000016432	PUS1	88	65.963	Pelodiscus_sinensis
ENSPREG00000007231	pus1	71	30.104	ENSPSIG00000013961	PUS3	55	30.065	Pelodiscus_sinensis
ENSPREG00000007231	pus1	94	82.596	ENSPMGG00000004522	pus1	95	79.292	Periophthalmus_magnuspinnatus
ENSPREG00000007231	pus1	99	68.347	ENSPEMG00000013448	Pus1	85	68.611	Peromyscus_maniculatus_bairdii
ENSPREG00000007231	pus1	92	61.027	ENSPMAG00000004636	pus1	100	61.027	Petromyzon_marinus
ENSPREG00000007231	pus1	84	61.056	ENSPCIG00000022609	-	75	58.544	Phascolarctos_cinereus
ENSPREG00000007231	pus1	99	98.050	ENSPFOG00000019669	pus1	95	97.980	Poecilia_formosa
ENSPREG00000007231	pus1	99	97.772	ENSPLAG00000002692	-	95	97.727	Poecilia_latipinna
ENSPREG00000007231	pus1	99	97.772	ENSPLAG00000007185	pus1	95	97.727	Poecilia_latipinna
ENSPREG00000007231	pus1	99	98.050	ENSPMEG00000011115	PUS1	95	97.980	Poecilia_mexicana
ENSPREG00000007231	pus1	99	98.050	ENSPMEG00000006038	pus1	100	98.015	Poecilia_mexicana
ENSPREG00000007231	pus1	98	68.079	ENSPPYG00000005132	PUS1	87	66.398	Pongo_abelii
ENSPREG00000007231	pus1	74	67.669	ENSPCAG00000009110	-	65	67.669	Procavia_capensis
ENSPREG00000007231	pus1	96	62.391	ENSPCOG00000015595	PUS1	90	60.109	Propithecus_coquereli
ENSPREG00000007231	pus1	99	86.351	ENSPNYG00000013571	pus1	94	84.010	Pundamilia_nyererei
ENSPREG00000007231	pus1	99	77.654	ENSPNAG00000003938	pus1	90	73.890	Pygocentrus_nattereri
ENSPREG00000007231	pus1	99	68.067	ENSRNOG00000037500	Pus1	86	67.302	Rattus_norvegicus
ENSPREG00000007231	pus1	98	68.644	ENSRBIG00000043177	PUS1	91	69.018	Rhinopithecus_bieti
ENSPREG00000007231	pus1	98	68.644	ENSRROG00000039744	PUS1	89	68.543	Rhinopithecus_roxellana
ENSPREG00000007231	pus1	73	30.094	YGL063W	-	85	30.094	Saccharomyces_cerevisiae
ENSPREG00000007231	pus1	92	43.836	YPL212C	-	63	41.358	Saccharomyces_cerevisiae
ENSPREG00000007231	pus1	98	68.362	ENSSBOG00000023593	PUS1	93	68.421	Saimiri_boliviensis_boliviensis
ENSPREG00000007231	pus1	99	68.169	ENSSHAG00000013193	PUS1	86	67.218	Sarcophilus_harrisii
ENSPREG00000007231	pus1	72	30.405	ENSSHAG00000001382	PUS3	54	30.405	Sarcophilus_harrisii
ENSPREG00000007231	pus1	97	72.376	ENSSFOG00015003463	pus1	95	66.268	Scleropages_formosus
ENSPREG00000007231	pus1	99	84.680	ENSSMAG00000019075	pus1	98	79.562	Scophthalmus_maximus
ENSPREG00000007231	pus1	99	86.908	ENSSDUG00000007102	pus1	94	84.810	Seriola_dumerili
ENSPREG00000007231	pus1	99	86.351	ENSSLDG00000022850	pus1	94	84.304	Seriola_lalandi_dorsalis
ENSPREG00000007231	pus1	84	62.914	ENSSARG00000008367	PUS1	97	62.914	Sorex_araneus
ENSPREG00000007231	pus1	98	69.405	ENSSPUG00000010009	PUS1	89	69.296	Sphenodon_punctatus
ENSPREG00000007231	pus1	99	84.401	ENSSPAG00000006272	pus1	99	82.353	Stegastes_partitus
ENSPREG00000007231	pus1	97	68.481	ENSSSCG00000009741	PUS1	92	66.125	Sus_scrofa
ENSPREG00000007231	pus1	92	71.818	ENSTGUG00000008068	PUS1	99	71.818	Taeniopygia_guttata
ENSPREG00000007231	pus1	73	30.208	ENSTGUG00000000778	-	59	30.208	Taeniopygia_guttata
ENSPREG00000007231	pus1	97	79.656	ENSTRUG00000002198	pus1	95	77.174	Takifugu_rubripes
ENSPREG00000007231	pus1	99	74.932	ENSTNIG00000003942	pus1	100	72.544	Tetraodon_nigroviridis
ENSPREG00000007231	pus1	71	30.556	ENSTBEG00000004382	PUS3	56	30.556	Tupaia_belangeri
ENSPREG00000007231	pus1	99	67.042	ENSTTRG00000000632	PUS1	87	64.960	Tursiops_truncatus
ENSPREG00000007231	pus1	92	70.783	ENSUAMG00000017197	PUS1	88	68.481	Ursus_americanus
ENSPREG00000007231	pus1	92	70.783	ENSUMAG00000002831	PUS1	95	71.698	Ursus_maritimus
ENSPREG00000007231	pus1	93	71.171	ENSVVUG00000004199	PUS1	79	69.942	Vulpes_vulpes
ENSPREG00000007231	pus1	89	48.125	ENSXETG00000033640	-	99	48.125	Xenopus_tropicalis
ENSPREG00000007231	pus1	95	68.513	ENSXETG00000002030	pus1	91	65.854	Xenopus_tropicalis
ENSPREG00000007231	pus1	99	97.015	ENSXCOG00000004722	pus1	100	97.015	Xiphophorus_couchianus
ENSPREG00000007231	pus1	99	96.379	ENSXMAG00000000988	pus1	95	96.212	Xiphophorus_maculatus