EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000007274 (Gene tree)
Gene ID: 103475392
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8064 bases
Position: chrLG14:3037879-3045942
Accession: 103475392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000010629	RRM_5	PF13893.6	1.5e-10	1	2
ENSPREP00000010629	RRM_5	PF13893.6	1.5e-10	2	2
ENSPREP00000010641	RRM_5	PF13893.6	2e-10	1	2
ENSPREP00000010641	RRM_5	PF13893.6	2e-10	2	2
ENSPREP00000010641	RRM_1	PF00076.22	1.5e-32	1	2
ENSPREP00000010641	RRM_1	PF00076.22	1.5e-32	2	2
ENSPREP00000010629	RRM_1	PF00076.22	1.6e-32	1	2
ENSPREP00000010629	RRM_1	PF00076.22	1.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010766	-	1628	XM_008426978	ENSPREP00000010641	521 (aa)	XP_008425200	-
ENSPRET00000010754	-	1733	-	ENSPREP00000010629	534 (aa)	-	-

Gene Model

Click here to download ENSPREG00000007274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000007274	-	72	63.636	ENSPREG00000003013	rbm14b	66	63.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007274	-	72	62.230	ENSAPOG00000021712	rbm14b	68	62.230	Acanthochromis_polyacanthus
ENSPREG00000007274	-	99	86.692	ENSAPOG00000003380	-	99	85.932	Acanthochromis_polyacanthus
ENSPREG00000007274	-	67	62.816	ENSACIG00000000381	rbm14b	81	47.280	Amphilophus_citrinellus
ENSPREG00000007274	-	99	85.086	ENSACIG00000021173	-	95	83.208	Amphilophus_citrinellus
ENSPREG00000007274	-	72	62.816	ENSAOCG00000008941	rbm14b	82	57.364	Amphiprion_ocellaris
ENSPREG00000007274	-	99	86.807	ENSAOCG00000001659	-	99	86.233	Amphiprion_ocellaris
ENSPREG00000007274	-	72	62.816	ENSAPEG00000003161	rbm14b	82	56.522	Amphiprion_percula
ENSPREG00000007274	-	99	86.807	ENSAPEG00000016988	-	99	86.233	Amphiprion_percula
ENSPREG00000007274	-	100	84.820	ENSATEG00000009700	-	98	83.647	Anabas_testudineus
ENSPREG00000007274	-	70	60.695	ENSATEG00000003034	rbm14b	78	58.942	Anabas_testudineus
ENSPREG00000007274	-	66	62.816	ENSACLG00000014355	rbm14b	63	62.816	Astatotilapia_calliptera
ENSPREG00000007274	-	100	86.174	ENSACLG00000009112	-	94	86.059	Astatotilapia_calliptera
ENSPREG00000007274	-	74	59.850	ENSAMXG00000007233	rbm14a	82	59.850	Astyanax_mexicanus
ENSPREG00000007274	-	69	62.637	ENSAMXG00000031225	rbm14b	86	48.211	Astyanax_mexicanus
ENSPREG00000007274	-	100	81.474	ENSCSEG00000019690	-	100	80.725	Cynoglossus_semilaevis
ENSPREG00000007274	-	75	52.703	ENSCSEG00000000357	rbm14b	81	53.153	Cynoglossus_semilaevis
ENSPREG00000007274	-	100	92.748	ENSCVAG00000014858	-	100	91.794	Cyprinodon_variegatus
ENSPREG00000007274	-	72	63.177	ENSCVAG00000013776	rbm14b	78	60.825	Cyprinodon_variegatus
ENSPREG00000007274	-	69	62.409	ENSDARG00000103834	rbm14b	64	62.774	Danio_rerio
ENSPREG00000007274	-	74	59.391	ENSDARG00000012723	rbm14a	80	59.542	Danio_rerio
ENSPREG00000007274	-	86	56.713	ENSELUG00000023633	rbm14a	81	57.611	Esox_lucius
ENSPREG00000007274	-	70	64.516	ENSELUG00000004690	rbm14b	78	64.158	Esox_lucius
ENSPREG00000007274	-	100	91.651	ENSFHEG00000020913	-	100	91.651	Fundulus_heteroclitus
ENSPREG00000007274	-	75	48.441	ENSFHEG00000021265	rbm14b	83	49.064	Fundulus_heteroclitus
ENSPREG00000007274	-	73	78.215	ENSGMOG00000010840	-	78	77.690	Gadus_morhua
ENSPREG00000007274	-	72	63.273	ENSGAFG00000001924	rbm14b	65	63.273	Gambusia_affinis
ENSPREG00000007274	-	100	99.040	ENSGAFG00000004455	-	100	99.040	Gambusia_affinis
ENSPREG00000007274	-	89	84.549	ENSGACG00000020440	-	95	83.691	Gasterosteus_aculeatus
ENSPREG00000007274	-	66	62.816	ENSHBUG00000016754	rbm14b	63	62.816	Haplochromis_burtoni
ENSPREG00000007274	-	100	86.174	ENSHBUG00000003665	-	99	86.059	Haplochromis_burtoni
ENSPREG00000007274	-	79	53.396	ENSHCOG00000012571	rbm14b	99	66.667	Hippocampus_comes
ENSPREG00000007274	-	100	68.449	ENSHCOG00000004071	-	76	82.206	Hippocampus_comes
ENSPREG00000007274	-	67	62.271	ENSIPUG00000009089	rbm14b	86	48.312	Ictalurus_punctatus
ENSPREG00000007274	-	74	55.742	ENSIPUG00000021256	rbm14a	83	55.635	Ictalurus_punctatus
ENSPREG00000007274	-	72	63.273	ENSKMAG00000020444	rbm14b	65	63.273	Kryptolebias_marmoratus
ENSPREG00000007274	-	99	85.577	ENSKMAG00000008514	-	99	84.778	Kryptolebias_marmoratus
ENSPREG00000007274	-	99	82.218	ENSLBEG00000001217	-	95	82.319	Labrus_bergylta
ENSPREG00000007274	-	53	63.043	ENSLBEG00000027934	rbm14b	60	63.043	Labrus_bergylta
ENSPREG00000007274	-	70	63.100	ENSMAMG00000014394	rbm14b	79	47.951	Mastacembelus_armatus
ENSPREG00000007274	-	100	81.818	ENSMAMG00000021313	-	100	81.629	Mastacembelus_armatus
ENSPREG00000007274	-	100	86.174	ENSMZEG00005001201	-	100	86.338	Maylandia_zebra
ENSPREG00000007274	-	67	62.816	ENSMZEG00005020834	rbm14b	64	62.816	Maylandia_zebra
ENSPREG00000007274	-	67	59.259	ENSMMOG00000012912	rbm14b	68	57.971	Mola_mola
ENSPREG00000007274	-	93	82.341	ENSMMOG00000014501	-	95	80.806	Mola_mola
ENSPREG00000007274	-	70	58.201	ENSMALG00000015445	rbm14b	83	58.225	Monopterus_albus
ENSPREG00000007274	-	67	62.816	ENSNBRG00000003378	rbm14b	64	62.816	Neolamprologus_brichardi
ENSPREG00000007274	-	99	85.741	ENSNBRG00000004960	-	95	84.369	Neolamprologus_brichardi
ENSPREG00000007274	-	70	60.695	ENSONIG00000013035	rbm14b	82	58.942	Oreochromis_niloticus
ENSPREG00000007274	-	89	84.989	ENSONIG00000008557	-	95	84.322	Oreochromis_niloticus
ENSPREG00000007274	-	73	49.153	ENSORLG00000008051	rbm14b	82	49.160	Oryzias_latipes
ENSPREG00000007274	-	100	84.160	ENSORLG00000001900	-	100	83.779	Oryzias_latipes
ENSPREG00000007274	-	100	84.160	ENSORLG00020019144	-	100	83.779	Oryzias_latipes_hni
ENSPREG00000007274	-	73	48.832	ENSORLG00020005551	rbm14b	82	48.247	Oryzias_latipes_hni
ENSPREG00000007274	-	73	48.941	ENSORLG00015022683	rbm14b	82	48.950	Oryzias_latipes_hsok
ENSPREG00000007274	-	100	84.160	ENSORLG00015000082	-	100	83.779	Oryzias_latipes_hsok
ENSPREG00000007274	-	79	86.486	ENSOMEG00000006508	-	100	89.744	Oryzias_melastigma
ENSPREG00000007274	-	71	63.273	ENSOMEG00000000910	rbm14b	78	57.908	Oryzias_melastigma
ENSPREG00000007274	-	73	50.763	ENSPKIG00000009078	rbm14b	85	49.244	Paramormyrops_kingsleyae
ENSPREG00000007274	-	80	79.097	ENSPMGG00000018869	-	93	87.162	Periophthalmus_magnuspinnatus
ENSPREG00000007274	-	67	62.590	ENSPMGG00000013064	rbm14b	66	62.590	Periophthalmus_magnuspinnatus
ENSPREG00000007274	-	100	99.424	ENSPFOG00000004843	-	100	99.424	Poecilia_formosa
ENSPREG00000007274	-	75	48.133	ENSPFOG00000003614	rbm14b	83	48.240	Poecilia_formosa
ENSPREG00000007274	-	100	99.424	ENSPLAG00000017359	-	100	99.424	Poecilia_latipinna
ENSPREG00000007274	-	100	99.424	ENSPMEG00000004894	-	100	99.424	Poecilia_mexicana
ENSPREG00000007274	-	72	63.636	ENSPMEG00000012911	rbm14b	65	63.636	Poecilia_mexicana
ENSPREG00000007274	-	67	62.816	ENSPNYG00000023605	rbm14b	74	62.816	Pundamilia_nyererei
ENSPREG00000007274	-	100	86.174	ENSPNYG00000015906	-	95	86.338	Pundamilia_nyererei
ENSPREG00000007274	-	73	57.794	ENSPNAG00000012473	rbm14a	87	56.221	Pygocentrus_nattereri
ENSPREG00000007274	-	69	62.637	ENSPNAG00000001977	rbm14b	83	48.421	Pygocentrus_nattereri
ENSPREG00000007274	-	78	51.245	ENSSFOG00015023796	rbm14b	88	51.037	Scleropages_formosus
ENSPREG00000007274	-	100	84.381	ENSSMAG00000002055	-	100	84.000	Scophthalmus_maximus
ENSPREG00000007274	-	72	63.899	ENSSMAG00000004522	rbm14b	79	63.899	Scophthalmus_maximus
ENSPREG00000007274	-	96	85.827	ENSSDUG00000020756	-	100	84.717	Seriola_dumerili
ENSPREG00000007274	-	72	62.816	ENSSDUG00000007975	rbm14b	65	62.816	Seriola_dumerili
ENSPREG00000007274	-	96	85.323	ENSSLDG00000006311	-	95	84.240	Seriola_lalandi_dorsalis
ENSPREG00000007274	-	72	62.816	ENSSLDG00000006472	rbm14b	65	62.816	Seriola_lalandi_dorsalis
ENSPREG00000007274	-	99	87.189	ENSSPAG00000010825	-	98	87.030	Stegastes_partitus
ENSPREG00000007274	-	72	62.816	ENSSPAG00000004231	rbm14b	64	62.816	Stegastes_partitus
ENSPREG00000007274	-	67	62.319	ENSTRUG00000005716	rbm14b	64	62.319	Takifugu_rubripes
ENSPREG00000007274	-	100	78.011	ENSTRUG00000009504	-	94	76.850	Takifugu_rubripes
ENSPREG00000007274	-	88	76.522	ENSTNIG00000000058	-	80	83.073	Tetraodon_nigroviridis
ENSPREG00000007274	-	70	54.521	ENSTNIG00000006844	rbm14b	79	55.000	Tetraodon_nigroviridis
ENSPREG00000007274	-	99	94.658	ENSXCOG00000006825	-	94	94.658	Xiphophorus_couchianus
ENSPREG00000007274	-	100	99.040	ENSXMAG00000000338	-	100	98.876	Xiphophorus_maculatus
ENSPREG00000007274	-	72	63.273	ENSXMAG00000008390	rbm14b	65	63.273	Xiphophorus_maculatus