EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000007398 (Gene tree)
Gene ID: 103467613
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 22515 bases
Position: chrLG7:20281047-20303561
Accession: 103467613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000010847	RRM_1	PF00076.22	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000010973	-	765	XM_008414161	ENSPREP00000010847	254 (aa)	XP_008412383	UPI0004A28FBD

Gene Model

Click here to download ENSPREG00000007398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007398's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000007398	rbm38	72	62.304	ENSPREG00000007414	rbm24a	81	64.062
ENSPREG00000007398	rbm38	98	60.920	ENSPREG00000016652	-	100	60.166
ENSPREG00000007398	rbm38	59	69.872	ENSPREG00000000762	rbm24b	81	61.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007398	rbm38	91	58.547	ENSG00000132819	RBM38	91	84.821	Homo_sapiens
ENSPREG00000007398	rbm38	98	60.392	ENSAPOG00000009939	-	100	60.236	Acanthochromis_polyacanthus
ENSPREG00000007398	rbm38	100	89.370	ENSAPOG00000003301	rbm38	100	89.370	Acanthochromis_polyacanthus
ENSPREG00000007398	rbm38	100	85.827	ENSACIG00000000010	rbm38	100	85.827	Amphilophus_citrinellus
ENSPREG00000007398	rbm38	98	61.024	ENSACIG00000012502	-	100	81.197	Amphilophus_citrinellus
ENSPREG00000007398	rbm38	95	60.494	ENSAOCG00000012559	RBM38	86	65.049	Amphiprion_ocellaris
ENSPREG00000007398	rbm38	100	89.764	ENSAOCG00000013497	-	100	89.764	Amphiprion_ocellaris
ENSPREG00000007398	rbm38	100	89.764	ENSAPEG00000013137	rbm38	100	89.764	Amphiprion_percula
ENSPREG00000007398	rbm38	98	59.608	ENSAPEG00000023581	-	100	59.055	Amphiprion_percula
ENSPREG00000007398	rbm38	100	83.465	ENSATEG00000016366	rbm38	100	83.465	Anabas_testudineus
ENSPREG00000007398	rbm38	98	60.784	ENSATEG00000016710	-	100	59.055	Anabas_testudineus
ENSPREG00000007398	rbm38	91	58.120	ENSACAG00000016238	RBM38	88	56.652	Anolis_carolinensis
ENSPREG00000007398	rbm38	91	58.120	ENSANAG00000031959	RBM38	78	90.426	Aotus_nancymaae
ENSPREG00000007398	rbm38	98	60.700	ENSACLG00000019514	-	100	57.480	Astatotilapia_calliptera
ENSPREG00000007398	rbm38	98	58.268	ENSAMXG00000015601	-	100	57.874	Astyanax_mexicanus
ENSPREG00000007398	rbm38	95	54.545	ENSAMXG00000038120	rbm38	96	54.959	Astyanax_mexicanus
ENSPREG00000007398	rbm38	91	59.402	ENSBTAG00000008105	RBM38	89	56.540	Bos_taurus
ENSPREG00000007398	rbm38	59	60.526	WBGene00006321	sup-12	78	70.588	Caenorhabditis_elegans
ENSPREG00000007398	rbm38	91	58.120	ENSCJAG00000019139	RBM38	78	90.426	Callithrix_jacchus
ENSPREG00000007398	rbm38	91	58.120	ENSCAFG00020021943	RBM38	89	57.265	Canis_lupus_dingo
ENSPREG00000007398	rbm38	91	58.974	ENSCHIG00000002609	RBM38	89	55.983	Capra_hircus
ENSPREG00000007398	rbm38	91	58.974	ENSCPOG00000012781	RBM38	89	56.838	Cavia_porcellus
ENSPREG00000007398	rbm38	91	58.120	ENSCCAG00000036872	RBM38	78	90.426	Cebus_capucinus
ENSPREG00000007398	rbm38	91	58.974	ENSCATG00000032133	RBM38	78	90.426	Cercocebus_atys
ENSPREG00000007398	rbm38	91	59.402	ENSCLAG00000005906	RBM38	78	65.217	Chinchilla_lanigera
ENSPREG00000007398	rbm38	91	58.974	ENSCSAG00000015503	RBM38	89	56.410	Chlorocebus_sabaeus
ENSPREG00000007398	rbm38	92	57.384	ENSCPBG00000024059	RBM38	84	63.830	Chrysemys_picta_bellii
ENSPREG00000007398	rbm38	59	60.625	ENSCING00000025102	-	53	70.732	Ciona_intestinalis
ENSPREG00000007398	rbm38	91	44.681	ENSCANG00000030105	-	78	42.979	Colobus_angolensis_palliatus
ENSPREG00000007398	rbm38	72	65.217	ENSCGRG00001012928	Rbm38	89	56.540	Cricetulus_griseus_chok1gshd
ENSPREG00000007398	rbm38	98	61.417	ENSCSEG00000004701	-	100	60.236	Cynoglossus_semilaevis
ENSPREG00000007398	rbm38	84	65.258	ENSCSEG00000020943	rbm38	63	68.041	Cynoglossus_semilaevis
ENSPREG00000007398	rbm38	100	92.126	ENSCVAG00000015952	rbm38	100	92.126	Cyprinodon_variegatus
ENSPREG00000007398	rbm38	98	61.961	ENSCVAG00000005472	-	100	59.843	Cyprinodon_variegatus
ENSPREG00000007398	rbm38	98	62.550	ENSDARG00000058818	rbm38	83	68.293	Danio_rerio
ENSPREG00000007398	rbm38	91	56.897	ENSDNOG00000032004	RBM38	98	55.603	Dasypus_novemcinctus
ENSPREG00000007398	rbm38	91	58.120	ENSECAG00000007700	RBM38	89	57.265	Equus_caballus
ENSPREG00000007398	rbm38	91	57.021	ENSEEUG00000013489	RBM38	89	54.468	Erinaceus_europaeus
ENSPREG00000007398	rbm38	98	59.073	ENSELUG00000005849	-	100	58.301	Esox_lucius
ENSPREG00000007398	rbm38	92	68.376	ENSELUG00000000585	-	100	66.239	Esox_lucius
ENSPREG00000007398	rbm38	91	58.547	ENSFCAG00000042916	RBM38	78	89.362	Felis_catus
ENSPREG00000007398	rbm38	69	69.318	ENSFALG00000010805	RBM38	88	65.143	Ficedula_albicollis
ENSPREG00000007398	rbm38	98	60.000	ENSFHEG00000006160	-	100	59.449	Fundulus_heteroclitus
ENSPREG00000007398	rbm38	100	92.941	ENSFHEG00000017748	rbm38	100	90.551	Fundulus_heteroclitus
ENSPREG00000007398	rbm38	76	65.625	ENSGMOG00000016655	-	100	66.146	Gadus_morhua
ENSPREG00000007398	rbm38	92	56.356	ENSGALG00000026081	RBM38	84	63.102	Gallus_gallus
ENSPREG00000007398	rbm38	93	73.840	ENSGACG00000015224	rbm38	100	73.840	Gasterosteus_aculeatus
ENSPREG00000007398	rbm38	93	57.500	ENSGACG00000009873	-	100	56.667	Gasterosteus_aculeatus
ENSPREG00000007398	rbm38	92	57.384	ENSGAGG00000001187	RBM38	84	63.102	Gopherus_agassizii
ENSPREG00000007398	rbm38	100	85.433	ENSHBUG00000012058	rbm38	100	85.433	Haplochromis_burtoni
ENSPREG00000007398	rbm38	98	60.700	ENSHBUG00000011778	-	100	57.480	Haplochromis_burtoni
ENSPREG00000007398	rbm38	91	59.829	ENSHGLG00000015077	RBM38	89	57.692	Heterocephalus_glaber_female
ENSPREG00000007398	rbm38	81	64.423	ENSHCOG00000005622	-	57	64.734	Hippocampus_comes
ENSPREG00000007398	rbm38	100	61.176	ENSHCOG00000019040	rbm38	100	61.176	Hippocampus_comes
ENSPREG00000007398	rbm38	98	57.087	ENSIPUG00000019349	-	100	55.512	Ictalurus_punctatus
ENSPREG00000007398	rbm38	91	73.222	ENSKMAG00000012402	rbm38	99	73.222	Kryptolebias_marmoratus
ENSPREG00000007398	rbm38	98	57.692	ENSLBEG00000016163	RBM38	100	58.140	Labrus_bergylta
ENSPREG00000007398	rbm38	100	84.252	ENSLBEG00000018878	rbm38	100	84.252	Labrus_bergylta
ENSPREG00000007398	rbm38	98	61.111	ENSLOCG00000003456	rbm38	100	57.143	Lepisosteus_oculatus
ENSPREG00000007398	rbm38	91	58.974	ENSMFAG00000043808	RBM38	78	90.426	Macaca_fascicularis
ENSPREG00000007398	rbm38	91	58.974	ENSMMUG00000031391	RBM38	78	90.426	Macaca_mulatta
ENSPREG00000007398	rbm38	91	58.974	ENSMNEG00000034683	RBM38	78	90.426	Macaca_nemestrina
ENSPREG00000007398	rbm38	98	62.205	ENSMAMG00000020499	RBM38	100	60.474	Mastacembelus_armatus
ENSPREG00000007398	rbm38	100	87.008	ENSMAMG00000024135	rbm38	100	85.039	Mastacembelus_armatus
ENSPREG00000007398	rbm38	100	85.433	ENSMZEG00005026036	rbm38	100	85.433	Maylandia_zebra
ENSPREG00000007398	rbm38	98	60.700	ENSMZEG00005000849	-	100	57.480	Maylandia_zebra
ENSPREG00000007398	rbm38	72	65.761	ENSMAUG00000021211	Rbm38	89	57.384	Mesocricetus_auratus
ENSPREG00000007398	rbm38	91	57.692	ENSMICG00000038011	RBM38	98	56.962	Microcebus_murinus
ENSPREG00000007398	rbm38	72	65.761	ENSMOCG00000008715	Rbm38	89	57.265	Microtus_ochrogaster
ENSPREG00000007398	rbm38	98	59.608	ENSMMOG00000020051	-	100	58.661	Mola_mola
ENSPREG00000007398	rbm38	92	55.932	ENSMODG00000016458	RBM38	91	55.508	Monodelphis_domestica
ENSPREG00000007398	rbm38	76	69.588	ENSMALG00000004680	RBM38	71	68.394	Monopterus_albus
ENSPREG00000007398	rbm38	100	70.472	ENSMALG00000022327	rbm38	100	68.217	Monopterus_albus
ENSPREG00000007398	rbm38	91	58.547	MGP_CAROLIEiJ_G0024745	Rbm38	89	55.696	Mus_caroli
ENSPREG00000007398	rbm38	91	58.547	ENSMUSG00000027510	Rbm38	89	55.696	Mus_musculus
ENSPREG00000007398	rbm38	91	57.692	MGP_PahariEiJ_G0026186	Rbm38	58	86.667	Mus_pahari
ENSPREG00000007398	rbm38	91	58.547	MGP_SPRETEiJ_G0025665	Rbm38	89	55.696	Mus_spretus
ENSPREG00000007398	rbm38	72	65.761	ENSMPUG00000006518	RBM38	89	63.043	Mustela_putorius_furo
ENSPREG00000007398	rbm38	91	58.120	ENSMLUG00000011140	RBM38	98	54.701	Myotis_lucifugus
ENSPREG00000007398	rbm38	98	60.700	ENSNBRG00000022545	-	100	58.203	Neolamprologus_brichardi
ENSPREG00000007398	rbm38	100	85.827	ENSNBRG00000022685	rbm38	100	85.827	Neolamprologus_brichardi
ENSPREG00000007398	rbm38	91	60.256	ENSODEG00000007980	RBM38	89	57.983	Octodon_degus
ENSPREG00000007398	rbm38	98	85.542	ENSONIG00000017073	rbm38	100	85.542	Oreochromis_niloticus
ENSPREG00000007398	rbm38	98	60.547	ENSONIG00000020324	-	100	58.039	Oreochromis_niloticus
ENSPREG00000007398	rbm38	78	61.616	ENSOANG00000009259	RBM38	69	63.243	Ornithorhynchus_anatinus
ENSPREG00000007398	rbm38	98	57.198	ENSORLG00000027180	-	100	56.693	Oryzias_latipes
ENSPREG00000007398	rbm38	100	82.353	ENSORLG00000012154	rbm38	100	79.216	Oryzias_latipes
ENSPREG00000007398	rbm38	100	56.705	ENSORLG00020020751	-	100	56.693	Oryzias_latipes_hni
ENSPREG00000007398	rbm38	100	83.137	ENSORLG00020017871	rbm38	100	79.216	Oryzias_latipes_hni
ENSPREG00000007398	rbm38	98	58.661	ENSORLG00015017040	-	100	58.984	Oryzias_latipes_hsok
ENSPREG00000007398	rbm38	100	83.137	ENSORLG00015012606	rbm38	100	79.216	Oryzias_latipes_hsok
ENSPREG00000007398	rbm38	100	83.137	ENSOMEG00000006805	rbm38	100	79.216	Oryzias_melastigma
ENSPREG00000007398	rbm38	98	58.039	ENSOMEG00000023912	-	100	57.812	Oryzias_melastigma
ENSPREG00000007398	rbm38	91	58.974	ENSOGAG00000029136	RBM38	88	56.118	Otolemur_garnettii
ENSPREG00000007398	rbm38	91	58.547	ENSPPRG00000009507	RBM38	78	89.362	Panthera_pardus
ENSPREG00000007398	rbm38	77	63.776	ENSPTRG00000013661	RBM38	78	90.426	Pan_troglodytes
ENSPREG00000007398	rbm38	95	46.939	ENSPANG00000033127	-	89	45.532	Papio_anubis
ENSPREG00000007398	rbm38	91	58.974	ENSPANG00000020919	-	78	90.426	Papio_anubis
ENSPREG00000007398	rbm38	98	58.333	ENSPKIG00000018122	-	95	82.883	Paramormyrops_kingsleyae
ENSPREG00000007398	rbm38	98	55.642	ENSPKIG00000025417	rbm38	83	62.679	Paramormyrops_kingsleyae
ENSPREG00000007398	rbm38	92	56.118	ENSPSIG00000011649	RBM38	77	62.032	Pelodiscus_sinensis
ENSPREG00000007398	rbm38	100	72.157	ENSPMGG00000011343	rbm38	100	74.118	Periophthalmus_magnuspinnatus
ENSPREG00000007398	rbm38	98	57.198	ENSPMGG00000017094	-	100	55.686	Periophthalmus_magnuspinnatus
ENSPREG00000007398	rbm38	92	56.356	ENSPCIG00000013648	RBM38	91	55.508	Phascolarctos_cinereus
ENSPREG00000007398	rbm38	100	99.606	ENSPFOG00000011658	rbm38	100	99.606	Poecilia_formosa
ENSPREG00000007398	rbm38	98	60.385	ENSPLAG00000002500	-	100	61.024	Poecilia_latipinna
ENSPREG00000007398	rbm38	100	99.213	ENSPLAG00000005218	rbm38	100	99.213	Poecilia_latipinna
ENSPREG00000007398	rbm38	100	99.213	ENSPMEG00000015770	rbm38	100	99.213	Poecilia_mexicana
ENSPREG00000007398	rbm38	91	58.120	ENSPCOG00000026201	RBM38	77	90.426	Propithecus_coquereli
ENSPREG00000007398	rbm38	72	40.217	ENSPVAG00000006457	RBM38	89	34.615	Pteropus_vampyrus
ENSPREG00000007398	rbm38	100	85.039	ENSPNYG00000021373	rbm38	100	85.039	Pundamilia_nyererei
ENSPREG00000007398	rbm38	98	60.700	ENSPNYG00000019727	-	100	81.197	Pundamilia_nyererei
ENSPREG00000007398	rbm38	98	59.055	ENSPNAG00000015123	-	88	82.456	Pygocentrus_nattereri
ENSPREG00000007398	rbm38	94	59.184	ENSPNAG00000010596	rbm38	98	58.506	Pygocentrus_nattereri
ENSPREG00000007398	rbm38	91	59.402	ENSRNOG00000006420	Rbm38	89	56.118	Rattus_norvegicus
ENSPREG00000007398	rbm38	92	50.847	ENSRROG00000036388	-	88	48.729	Rhinopithecus_roxellana
ENSPREG00000007398	rbm38	91	57.265	ENSSBOG00000031053	RBM38	88	90.426	Saimiri_boliviensis_boliviensis
ENSPREG00000007398	rbm38	98	57.540	ENSSFOG00015004453	rbm38	100	53.906	Scleropages_formosus
ENSPREG00000007398	rbm38	100	87.008	ENSSDUG00000022611	rbm38	100	87.008	Seriola_dumerili
ENSPREG00000007398	rbm38	98	61.328	ENSSDUG00000021082	RBM38	100	59.843	Seriola_dumerili
ENSPREG00000007398	rbm38	98	61.328	ENSSLDG00000011778	RBM38	100	59.449	Seriola_lalandi_dorsalis
ENSPREG00000007398	rbm38	100	87.008	ENSSLDG00000010845	rbm38	100	87.008	Seriola_lalandi_dorsalis
ENSPREG00000007398	rbm38	98	60.784	ENSSPAG00000020989	RBM38	100	59.843	Stegastes_partitus
ENSPREG00000007398	rbm38	100	89.370	ENSSPAG00000011113	rbm38	100	89.370	Stegastes_partitus
ENSPREG00000007398	rbm38	91	58.120	ENSSSCG00000007504	RBM38	89	55.983	Sus_scrofa
ENSPREG00000007398	rbm38	100	78.740	ENSTRUG00000024954	rbm38	100	75.197	Takifugu_rubripes
ENSPREG00000007398	rbm38	98	59.449	ENSTRUG00000019869	-	100	59.449	Takifugu_rubripes
ENSPREG00000007398	rbm38	94	60.166	ENSTNIG00000007093	-	100	58.091	Tetraodon_nigroviridis
ENSPREG00000007398	rbm38	74	64.550	ENSUAMG00000019780	RBM38	89	55.556	Ursus_americanus
ENSPREG00000007398	rbm38	91	58.120	ENSVVUG00000017246	RBM38	89	57.265	Vulpes_vulpes
ENSPREG00000007398	rbm38	76	63.402	ENSXETG00000011268	rbm38	98	56.067	Xenopus_tropicalis
ENSPREG00000007398	rbm38	83	53.540	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSPREG00000007398	rbm38	100	97.244	ENSXMAG00000023662	rbm38	100	97.244	Xiphophorus_maculatus