EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000007592 (Gene tree)
Gene ID
103478088
Gene Symbol
cnot3a
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
11449 bases
Position
chrLG16:11079814-11091262
Accession
103478088
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000011335Not3PF04065.155.4e-9711
ENSPREP00000011310Not3PF04065.159.2e-9711
ENSPREP00000011259Not3PF04065.151.5e-9411
ENSPREP00000011335NOT2_3_5PF04153.189e-3911
ENSPREP00000011310NOT2_3_5PF04153.183.5e-3811
ENSPREP00000011259NOT2_3_5PF04153.185.7e-3711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000011461-1815-ENSPREP00000011335604 (aa)--
ENSPRET00000011437-2493-ENSPREP00000011310830 (aa)--
ENSPRET00000011386-2685XM_008431580ENSPREP00000011259894 (aa)XP_008429802-
Gene Model
Click here to download ENSPREG00000007592's gene model file
Pathways
Pathway IDPathway NameSource
pret03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007592's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000007592cnot3a9579.283ENSPREG00000000662cnot3b6679.283
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000007592cnot3a8686.381ENSG00000088038CNOT310094.330Homo_sapiens
ENSPREG00000007592cnot3a7487.963ENSAPOG00000015002cnot3b8188.727Acanthochromis_polyacanthus
ENSPREG00000007592cnot3a5787.189ENSAPOG00000015499CNOT39287.900Acanthochromis_polyacanthus
ENSPREG00000007592cnot3a8686.770ENSAMEG00000004528CNOT38588.525Ailuropoda_melanoleuca
ENSPREG00000007592cnot3a9998.718ENSACIG00000006635cnot3a10098.718Amphilophus_citrinellus
ENSPREG00000007592cnot3a9970.921ENSACIG00000003652cnot3b9886.722Amphilophus_citrinellus
ENSPREG00000007592cnot3a9895.142ENSAOCG00000023769cnot3a9983.480Amphiprion_ocellaris
ENSPREG00000007592cnot3a9673.593ENSAOCG00000018385-9777.990Amphiprion_ocellaris
ENSPREG00000007592cnot3a9287.500ENSAPEG00000002640cnot3b8993.333Amphiprion_percula
ENSPREG00000007592cnot3a10095.142ENSAPEG00000006624cnot3a10085.590Amphiprion_percula
ENSPREG00000007592cnot3a10094.737ENSATEG00000022737cnot3a10085.932Anabas_testudineus
ENSPREG00000007592cnot3a10088.327ENSATEG00000015777cnot3b6393.617Anabas_testudineus
ENSPREG00000007592cnot3a8489.600ENSACAG00000016085CNOT39089.216Anolis_carolinensis
ENSPREG00000007592cnot3a8686.381ENSANAG00000025756CNOT38688.197Aotus_nancymaae
ENSPREG00000007592cnot3a10095.142ENSACLG00000021136cnot3a10085.978Astatotilapia_calliptera
ENSPREG00000007592cnot3a10089.844ENSACLG00000016702cnot3b6986.989Astatotilapia_calliptera
ENSPREG00000007592cnot3a9895.089ENSAMXG00000009447cnot3b9982.450Astyanax_mexicanus
ENSPREG00000007592cnot3a10093.200ENSAMXG00000012359cnot3a10065.870Astyanax_mexicanus
ENSPREG00000007592cnot3a8686.381ENSBTAG00000014900CNOT38588.197Bos_taurus
ENSPREG00000007592cnot3a7052.083WBGene00003826ntl-39752.083Caenorhabditis_elegans
ENSPREG00000007592cnot3a8686.381ENSCJAG00000001094CNOT38488.197Callithrix_jacchus
ENSPREG00000007592cnot3a8686.381ENSCAFG00000002699CNOT38488.197Canis_familiaris
ENSPREG00000007592cnot3a8686.381ENSCAFG00020018359CNOT38488.197Canis_lupus_dingo
ENSPREG00000007592cnot3a8583.984ENSCHIG00000015302CNOT38586.184Capra_hircus
ENSPREG00000007592cnot3a8686.381ENSTSYG00000008058CNOT39388.235Carlito_syrichta
ENSPREG00000007592cnot3a8686.381ENSCAPG00000009533CNOT38888.235Cavia_aperea
ENSPREG00000007592cnot3a8686.381ENSCPOG00000020741CNOT38888.235Cavia_porcellus
ENSPREG00000007592cnot3a8686.381ENSCCAG00000036290CNOT38688.197Cebus_capucinus
ENSPREG00000007592cnot3a8686.381ENSCATG00000030324CNOT38888.235Cercocebus_atys
ENSPREG00000007592cnot3a8686.381ENSCLAG00000003302CNOT310085.366Chinchilla_lanigera
ENSPREG00000007592cnot3a8686.381ENSCSAG00000001900CNOT38888.235Chlorocebus_sabaeus
ENSPREG00000007592cnot3a9787.549ENSCPBG00000011655CNOT38988.889Chrysemys_picta_bellii
ENSPREG00000007592cnot3a8269.957ENSCING00000000293-7169.957Ciona_intestinalis
ENSPREG00000007592cnot3a8686.381ENSCANG00000013408CNOT39388.235Colobus_angolensis_palliatus
ENSPREG00000007592cnot3a8286.770ENSCGRG00001000855Cnot37588.562Cricetulus_griseus_chok1gshd
ENSPREG00000007592cnot3a6968.837ENSCGRG00000012929Cnot37368.837Cricetulus_griseus_crigri
ENSPREG00000007592cnot3a10093.927ENSCSEG00000003574cnot3a10084.159Cynoglossus_semilaevis
ENSPREG00000007592cnot3a10086.000ENSCSEG00000016892cnot3b6490.129Cynoglossus_semilaevis
ENSPREG00000007592cnot3a8487.097ENSCVAG00000022122cnot3b6987.097Cyprinodon_variegatus
ENSPREG00000007592cnot3a10095.181ENSCVAG00000008168cnot3a10089.474Cyprinodon_variegatus
ENSPREG00000007592cnot3a9591.093ENSDARG00000019842cnot3b6494.043Danio_rerio
ENSPREG00000007592cnot3a10093.089ENSDARG00000007135cnot3a9287.387Danio_rerio
ENSPREG00000007592cnot3a8685.992ENSDNOG00000045972CNOT39387.908Dasypus_novemcinctus
ENSPREG00000007592cnot3a8686.381ENSDORG00000008021Cnot39388.235Dipodomys_ordii
ENSPREG00000007592cnot3a71100.000ENSETEG00000006305CNOT370100.000Echinops_telfairi
ENSPREG00000007592cnot3a8075.794ENSEBUG00000010437cnot3a6874.537Eptatretus_burgeri
ENSPREG00000007592cnot3a8686.381ENSEASG00005021591CNOT39388.235Equus_asinus_asinus
ENSPREG00000007592cnot3a8686.381ENSECAG00000023181CNOT39388.235Equus_caballus
ENSPREG00000007592cnot3a9995.726ENSELUG00000014743cnot3a9192.694Esox_lucius
ENSPREG00000007592cnot3a10090.040ENSELUG00000000953cnot3b8883.713Esox_lucius
ENSPREG00000007592cnot3a8686.381ENSFCAG00000014042CNOT39788.197Felis_catus
ENSPREG00000007592cnot3a8487.500ENSFHEG00000001696cnot3b6487.500Fundulus_heteroclitus
ENSPREG00000007592cnot3a9997.890ENSFHEG00000023166cnot3a9698.718Fundulus_heteroclitus
ENSPREG00000007592cnot3a9185.141ENSGMOG00000005365cnot3a8989.091Gadus_morhua
ENSPREG00000007592cnot3a8086.694ENSGAFG00000003459cnot3b6586.694Gambusia_affinis
ENSPREG00000007592cnot3a10095.700ENSGAFG00000013094cnot3a10095.700Gambusia_affinis
ENSPREG00000007592cnot3a7383.582ENSGACG00000009395cnot3b5583.582Gasterosteus_aculeatus
ENSPREG00000007592cnot3a9185.141ENSGACG00000011489cnot3a9876.968Gasterosteus_aculeatus
ENSPREG00000007592cnot3a8382.941ENSGAGG00000012677CNOT38886.301Gopherus_agassizii
ENSPREG00000007592cnot3a8686.381ENSGGOG00000012996CNOT38688.197Gorilla_gorilla
ENSPREG00000007592cnot3a7294.059ENSHBUG00000019699cnot3b6394.059Haplochromis_burtoni
ENSPREG00000007592cnot3a10095.142ENSHBUG00000005275cnot3a10086.087Haplochromis_burtoni
ENSPREG00000007592cnot3a8686.381ENSHGLG00000008821CNOT310080.460Heterocephalus_glaber_female
ENSPREG00000007592cnot3a8382.707ENSHGLG00100006181CNOT310080.460Heterocephalus_glaber_male
ENSPREG00000007592cnot3a9798.718ENSHCOG00000020968cnot3a10082.116Hippocampus_comes
ENSPREG00000007592cnot3a9996.154ENSIPUG00000009046cnot3b7096.154Ictalurus_punctatus
ENSPREG00000007592cnot3a9994.444ENSIPUG00000000167cnot37194.468Ictalurus_punctatus
ENSPREG00000007592cnot3a8686.381ENSSTOG00000028248CNOT38888.235Ictidomys_tridecemlineatus
ENSPREG00000007592cnot3a8486.770ENSJJAG00000014594Cnot39388.562Jaculus_jaculus
ENSPREG00000007592cnot3a10095.142ENSKMAG00000004863cnot3a10090.761Kryptolebias_marmoratus
ENSPREG00000007592cnot3a8188.672ENSKMAG00000018723cnot3b6794.043Kryptolebias_marmoratus
ENSPREG00000007592cnot3a7794.495ENSLBEG00000017296cnot3a6994.346Labrus_bergylta
ENSPREG00000007592cnot3a9590.040ENSLBEG00000018278cnot3b7289.577Labrus_bergylta
ENSPREG00000007592cnot3a8585.992ENSLACG00000009742CNOT39087.255Latimeria_chalumnae
ENSPREG00000007592cnot3a7490.374ENSLOCG00000000005cnot3b9390.850Lepisosteus_oculatus
ENSPREG00000007592cnot3a8685.271ENSLAFG00000022133CNOT37087.622Loxodonta_africana
ENSPREG00000007592cnot3a8686.381ENSMFAG00000040073CNOT38888.235Macaca_fascicularis
ENSPREG00000007592cnot3a8292.735ENSMMUG00000009698CNOT310096.078Macaca_mulatta
ENSPREG00000007592cnot3a8686.381ENSMNEG00000036750CNOT38888.235Macaca_nemestrina
ENSPREG00000007592cnot3a8686.381ENSMLEG00000036579CNOT38788.235Mandrillus_leucophaeus
ENSPREG00000007592cnot3a10094.737ENSMAMG00000019397cnot3a10082.391Mastacembelus_armatus
ENSPREG00000007592cnot3a10063.494ENSMAMG00000019357cnot3b6293.191Mastacembelus_armatus
ENSPREG00000007592cnot3a10095.142ENSMZEG00005016304cnot3a10085.978Maylandia_zebra
ENSPREG00000007592cnot3a10089.844ENSMZEG00005002466cnot3b6986.989Maylandia_zebra
ENSPREG00000007592cnot3a8686.770ENSMAUG00000014996Cnot38888.562Mesocricetus_auratus
ENSPREG00000007592cnot3a8686.381ENSMICG00000002370CNOT37588.235Microcebus_murinus
ENSPREG00000007592cnot3a10068.315ENSMMOG00000013086cnot3b9985.944Mola_mola
ENSPREG00000007592cnot3a9992.735ENSMMOG00000016446cnot3a10082.766Mola_mola
ENSPREG00000007592cnot3a8287.160ENSMODG00000004066CNOT39688.889Monodelphis_domestica
ENSPREG00000007592cnot3a7985.811ENSMALG00000004936cnot3b9585.522Monopterus_albus
ENSPREG00000007592cnot3a10093.927ENSMALG00000009204cnot3a10083.097Monopterus_albus
ENSPREG00000007592cnot3a8686.770MGP_CAROLIEiJ_G0029095Cnot310098.000Mus_caroli
ENSPREG00000007592cnot3a8686.770ENSMUSG00000035632Cnot310098.000Mus_musculus
ENSPREG00000007592cnot3a8686.770MGP_PahariEiJ_G0020964Cnot310098.000Mus_pahari
ENSPREG00000007592cnot3a8686.770MGP_SPRETEiJ_G0030148Cnot310098.000Mus_spretus
ENSPREG00000007592cnot3a8686.381ENSMPUG00000010352CNOT38488.197Mustela_putorius_furo
ENSPREG00000007592cnot3a8286.381ENSNGAG00000013266Cnot38588.197Nannospalax_galili
ENSPREG00000007592cnot3a10095.142ENSNBRG00000002401cnot3a10084.022Neolamprologus_brichardi
ENSPREG00000007592cnot3a9284.274ENSNBRG00000003336cnot3b9489.333Neolamprologus_brichardi
ENSPREG00000007592cnot3a7091.566ENSNLEG00000006272CNOT38788.235Nomascus_leucogenys
ENSPREG00000007592cnot3a71100.000ENSMEUG00000002952CNOT368100.000Notamacropus_eugenii
ENSPREG00000007592cnot3a66100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSPREG00000007592cnot3a8686.381ENSODEG00000000705CNOT310088.608Octodon_degus
ENSPREG00000007592cnot3a10095.142ENSONIG00000006568cnot3a10085.870Oreochromis_niloticus
ENSPREG00000007592cnot3a9389.453ENSONIG00000007047cnot3b6986.617Oreochromis_niloticus
ENSPREG00000007592cnot3a8686.381ENSOCUG00000007691CNOT38888.235Oryctolagus_cuniculus
ENSPREG00000007592cnot3a10088.281ENSORLG00000005982cnot3b6894.017Oryzias_latipes
ENSPREG00000007592cnot3a10094.737ENSORLG00000011174cnot3a10085.120Oryzias_latipes
ENSPREG00000007592cnot3a10094.737ENSORLG00020008009cnot3a10084.902Oryzias_latipes_hni
ENSPREG00000007592cnot3a10088.281ENSORLG00020005779cnot3b6794.017Oryzias_latipes_hni
ENSPREG00000007592cnot3a10094.737ENSORLG00015013729cnot3a10084.573Oryzias_latipes_hsok
ENSPREG00000007592cnot3a10088.281ENSORLG00015019021cnot3b6794.017Oryzias_latipes_hsok
ENSPREG00000007592cnot3a10088.281ENSOMEG00000015557cnot3b6894.017Oryzias_melastigma
ENSPREG00000007592cnot3a10094.737ENSOMEG00000010309cnot3a9295.669Oryzias_melastigma
ENSPREG00000007592cnot3a8686.381ENSOGAG00000006945CNOT37588.235Otolemur_garnettii
ENSPREG00000007592cnot3a7491.444ENSOARG00000002981CNOT36491.444Ovis_aries
ENSPREG00000007592cnot3a8686.381ENSPPAG00000002748CNOT38688.197Pan_paniscus
ENSPREG00000007592cnot3a8686.381ENSPPRG00000011705CNOT39788.197Panthera_pardus
ENSPREG00000007592cnot3a8686.381ENSPTIG00000008781CNOT310086.928Panthera_tigris_altaica
ENSPREG00000007592cnot3a8686.381ENSPTRG00000011444CNOT38688.197Pan_troglodytes
ENSPREG00000007592cnot3a8686.381ENSPTRG00000046717-8688.197Pan_troglodytes
ENSPREG00000007592cnot3a8686.381ENSPANG00000009375CNOT38888.235Papio_anubis
ENSPREG00000007592cnot3a9689.453ENSPKIG00000015967-9995.299Paramormyrops_kingsleyae
ENSPREG00000007592cnot3a9890.811ENSPKIG00000011733CNOT39184.918Paramormyrops_kingsleyae
ENSPREG00000007592cnot3a5290.598ENSPMGG00000012037cnot3a8990.598Periophthalmus_magnuspinnatus
ENSPREG00000007592cnot3a9486.441ENSPMGG00000022539cnot3b6492.093Periophthalmus_magnuspinnatus
ENSPREG00000007592cnot3a8686.770ENSPEMG00000024185Cnot39388.562Peromyscus_maniculatus_bairdii
ENSPREG00000007592cnot3a8686.770ENSPCIG00000023018CNOT39688.562Phascolarctos_cinereus
ENSPREG00000007592cnot3a9185.484ENSPFOG00000007168cnot3b6585.484Poecilia_formosa
ENSPREG00000007592cnot3a10096.582ENSPFOG00000008693cnot3a9696.582Poecilia_formosa
ENSPREG00000007592cnot3a10096.362ENSPLAG00000013324cnot3a10096.362Poecilia_latipinna
ENSPREG00000007592cnot3a9585.484ENSPLAG00000013457cnot3b6585.484Poecilia_latipinna
ENSPREG00000007592cnot3a10096.582ENSPMEG00000017718cnot3a10096.582Poecilia_mexicana
ENSPREG00000007592cnot3a9585.484ENSPMEG00000010184cnot3b6585.484Poecilia_mexicana
ENSPREG00000007592cnot3a8685.992ENSPPYG00000010372CNOT38887.908Pongo_abelii
ENSPREG00000007592cnot3a6293.220ENSPCAG00000011999CNOT35693.220Procavia_capensis
ENSPREG00000007592cnot3a8686.381ENSPCOG00000017673CNOT39788.197Propithecus_coquereli
ENSPREG00000007592cnot3a8685.603ENSPVAG00000015564CNOT37087.582Pteropus_vampyrus
ENSPREG00000007592cnot3a9988.583ENSPNYG00000003358cnot3b6885.768Pundamilia_nyererei
ENSPREG00000007592cnot3a10095.142ENSPNYG00000002282cnot3a10086.196Pundamilia_nyererei
ENSPREG00000007592cnot3a10092.800ENSPNAG00000017679cnot3a9496.154Pygocentrus_nattereri
ENSPREG00000007592cnot3a10090.726ENSPNAG00000027459cnot3b6493.617Pygocentrus_nattereri
ENSPREG00000007592cnot3a8686.770ENSRNOG00000053234Cnot38888.562Rattus_norvegicus
ENSPREG00000007592cnot3a8686.381ENSRBIG00000031025CNOT39388.235Rhinopithecus_bieti
ENSPREG00000007592cnot3a8686.381ENSRROG00000003872CNOT39388.235Rhinopithecus_roxellana
ENSPREG00000007592cnot3a10086.381ENSSBOG00000030268CNOT38088.197Saimiri_boliviensis_boliviensis
ENSPREG00000007592cnot3a9988.672ENSSFOG00015000248cnot36894.872Scleropages_formosus
ENSPREG00000007592cnot3a10093.089ENSSFOG00015019203-6995.745Scleropages_formosus
ENSPREG00000007592cnot3a8089.200ENSSMAG00000016031cnot3b6193.191Scophthalmus_maximus
ENSPREG00000007592cnot3a10093.522ENSSMAG00000013235cnot3a10085.559Scophthalmus_maximus
ENSPREG00000007592cnot3a9998.291ENSSDUG00000008181cnot3a10098.291Seriola_dumerili
ENSPREG00000007592cnot3a8988.426ENSSDUG00000003428cnot3b6293.617Seriola_dumerili
ENSPREG00000007592cnot3a9594.737ENSSLDG00000014733cnot3a9986.599Seriola_lalandi_dorsalis
ENSPREG00000007592cnot3a8988.426ENSSLDG00000014376cnot3b6293.617Seriola_lalandi_dorsalis
ENSPREG00000007592cnot3a8587.160ENSSPUG00000008510CNOT38988.889Sphenodon_punctatus
ENSPREG00000007592cnot3a9895.142ENSSPAG00000003858cnot3a9196.797Stegastes_partitus
ENSPREG00000007592cnot3a10089.062ENSSPAG00000001429cnot3b6694.468Stegastes_partitus
ENSPREG00000007592cnot3a8686.381ENSSSCG00000003264CNOT38488.197Sus_scrofa
ENSPREG00000007592cnot3a10093.522ENSTRUG00000015732cnot3a10083.607Takifugu_rubripes
ENSPREG00000007592cnot3a10088.770ENSTRUG00000007248cnot3b6091.064Takifugu_rubripes
ENSPREG00000007592cnot3a7385.547ENSTNIG00000005663cnot3b6191.064Tetraodon_nigroviridis
ENSPREG00000007592cnot3a9193.927ENSTNIG00000008082cnot3a6697.447Tetraodon_nigroviridis
ENSPREG00000007592cnot3a5594.737ENSTBEG00000009620-5494.737Tupaia_belangeri
ENSPREG00000007592cnot3a8686.770ENSUAMG00000005234CNOT38788.562Ursus_americanus
ENSPREG00000007592cnot3a8393.191ENSUMAG00000010934CNOT39193.162Ursus_maritimus
ENSPREG00000007592cnot3a5993.396ENSVPAG00000001320-5293.396Vicugna_pacos
ENSPREG00000007592cnot3a8586.381ENSVVUG00000008239CNOT38388.197Vulpes_vulpes
ENSPREG00000007592cnot3a8484.496ENSXETG00000003166cnot38987.419Xenopus_tropicalis
ENSPREG00000007592cnot3a8686.290ENSXCOG00000018976cnot3b6686.290Xiphophorus_couchianus
ENSPREG00000007592cnot3a9998.312ENSXCOG00000019460cnot3a10096.301Xiphophorus_couchianus
ENSPREG00000007592cnot3a9186.290ENSXMAG00000014176cnot3b6886.290Xiphophorus_maculatus
ENSPREG00000007592cnot3a10095.700ENSXMAG00000012273cnot3a10095.700Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us