EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000007618 (Gene tree)
Gene ID: 103479567
Gene Symbol: cmss1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 6229 bases
Position: chrLG2:17348798-17355026
Accession: 103479567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011175	CMS1	PF14617.6	7.6e-33	1	1
ENSPREP00000011175	DEAD	PF00270.29	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011302	-	885	XM_008434074	ENSPREP00000011175	294 (aa)	XP_008432296	-

Gene Model

Click here to download ENSPREG00000007618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007618	cmss1	69	61.881	ENSG00000184220	CMSS1	98	66.250	Homo_sapiens
ENSPREG00000007618	cmss1	69	82.759	ENSAPOG00000010604	cmss1	96	72.031	Acanthochromis_polyacanthus
ENSPREG00000007618	cmss1	86	56.299	ENSAMEG00000004092	CMSS1	96	56.693	Ailuropoda_melanoleuca
ENSPREG00000007618	cmss1	90	74.242	ENSACIG00000021854	cmss1	98	74.330	Amphilophus_citrinellus
ENSPREG00000007618	cmss1	80	79.060	ENSAOCG00000013361	cmss1	95	78.986	Amphiprion_ocellaris
ENSPREG00000007618	cmss1	78	78.947	ENSAPEG00000005829	cmss1	95	78.623	Amphiprion_percula
ENSPREG00000007618	cmss1	95	70.819	ENSATEG00000008209	cmss1	91	76.426	Anabas_testudineus
ENSPREG00000007618	cmss1	69	59.406	ENSAPLG00000010542	CMSS1	88	59.406	Anas_platyrhynchos
ENSPREG00000007618	cmss1	92	52.768	ENSACAG00000011065	CMSS1	92	54.406	Anolis_carolinensis
ENSPREG00000007618	cmss1	84	57.028	ENSANAG00000023565	CMSS1	94	57.028	Aotus_nancymaae
ENSPREG00000007618	cmss1	90	78.868	ENSACLG00000027294	cmss1	89	79.693	Astatotilapia_calliptera
ENSPREG00000007618	cmss1	68	62.500	ENSAMXG00000002046	cmss1	88	56.757	Astyanax_mexicanus
ENSPREG00000007618	cmss1	69	62.871	ENSBTAG00000013663	CMSS1	82	59.914	Bos_taurus
ENSPREG00000007618	cmss1	82	60.000	ENSCJAG00000000610	CMSS1	89	60.000	Callithrix_jacchus
ENSPREG00000007618	cmss1	69	61.881	ENSCAFG00000009230	CMSS1	89	56.400	Canis_familiaris
ENSPREG00000007618	cmss1	69	59.901	ENSCAFG00020024156	-	63	59.901	Canis_lupus_dingo
ENSPREG00000007618	cmss1	84	56.225	ENSCAFG00020009464	-	89	56.000	Canis_lupus_dingo
ENSPREG00000007618	cmss1	69	62.871	ENSCHIG00000013003	CMSS1	82	59.914	Capra_hircus
ENSPREG00000007618	cmss1	91	56.134	ENSTSYG00000009266	CMSS1	94	57.831	Carlito_syrichta
ENSPREG00000007618	cmss1	74	49.541	ENSCAPG00000013584	CMSS1	87	55.914	Cavia_aperea
ENSPREG00000007618	cmss1	82	59.167	ENSCPOG00000014680	CMSS1	85	59.751	Cavia_porcellus
ENSPREG00000007618	cmss1	82	59.167	ENSCCAG00000034685	CMSS1	89	59.167	Cebus_capucinus
ENSPREG00000007618	cmss1	69	62.871	ENSCATG00000031980	CMSS1	77	62.871	Cercocebus_atys
ENSPREG00000007618	cmss1	68	62.000	ENSCLAG00000011241	CMSS1	97	58.621	Chinchilla_lanigera
ENSPREG00000007618	cmss1	69	62.871	ENSCSAG00000006024	CMSS1	82	62.871	Chlorocebus_sabaeus
ENSPREG00000007618	cmss1	68	46.000	ENSCHOG00000012098	CMSS1	89	44.000	Choloepus_hoffmanni
ENSPREG00000007618	cmss1	63	45.455	ENSCING00000014848	-	99	45.455	Ciona_intestinalis
ENSPREG00000007618	cmss1	69	62.871	ENSCANG00000031337	CMSS1	87	60.173	Colobus_angolensis_palliatus
ENSPREG00000007618	cmss1	69	60.891	ENSCGRG00001014305	Cmss1	73	60.891	Cricetulus_griseus_chok1gshd
ENSPREG00000007618	cmss1	69	60.891	ENSCGRG00000006722	Cmss1	79	60.891	Cricetulus_griseus_crigri
ENSPREG00000007618	cmss1	89	68.561	ENSCSEG00000004958	cmss1	90	68.561	Cynoglossus_semilaevis
ENSPREG00000007618	cmss1	87	84.436	ENSCVAG00000005039	cmss1	91	83.525	Cyprinodon_variegatus
ENSPREG00000007618	cmss1	87	61.004	ENSDARG00000112579	cmss1	91	60.674	Danio_rerio
ENSPREG00000007618	cmss1	69	61.386	ENSDNOG00000040418	CMSS1	82	58.190	Dasypus_novemcinctus
ENSPREG00000007618	cmss1	68	62.000	ENSDORG00000010461	Cmss1	83	58.228	Dipodomys_ordii
ENSPREG00000007618	cmss1	68	61.500	ENSEASG00005010966	CMSS1	92	61.881	Equus_asinus_asinus
ENSPREG00000007618	cmss1	96	51.056	ENSECAG00000015662	CMSS1	89	61.386	Equus_caballus
ENSPREG00000007618	cmss1	68	43.500	ENSEEUG00000007624	-	73	44.059	Erinaceus_europaeus
ENSPREG00000007618	cmss1	89	63.118	ENSELUG00000019459	cmss1	86	64.368	Esox_lucius
ENSPREG00000007618	cmss1	88	55.939	ENSFCAG00000044577	CMSS1	92	55.344	Felis_catus
ENSPREG00000007618	cmss1	69	58.911	ENSFALG00000005816	CMSS1	85	58.911	Ficedula_albicollis
ENSPREG00000007618	cmss1	69	62.871	ENSFDAG00000012577	CMSS1	89	62.871	Fukomys_damarensis
ENSPREG00000007618	cmss1	79	85.776	ENSFHEG00000012008	cmss1	95	85.776	Fundulus_heteroclitus
ENSPREG00000007618	cmss1	88	68.077	ENSGMOG00000016729	cmss1	90	68.077	Gadus_morhua
ENSPREG00000007618	cmss1	93	52.920	ENSGALG00000015267	CMSS1	77	60.396	Gallus_gallus
ENSPREG00000007618	cmss1	91	85.556	ENSGAFG00000021217	cmss1	97	85.551	Gambusia_affinis
ENSPREG00000007618	cmss1	94	68.478	ENSGACG00000002798	cmss1	90	69.884	Gasterosteus_aculeatus
ENSPREG00000007618	cmss1	84	53.755	ENSGAGG00000019861	CMSS1	79	62.376	Gopherus_agassizii
ENSPREG00000007618	cmss1	69	62.376	ENSGGOG00000014125	CMSS1	89	58.898	Gorilla_gorilla
ENSPREG00000007618	cmss1	96	76.241	ENSHBUG00000008431	cmss1	92	79.693	Haplochromis_burtoni
ENSPREG00000007618	cmss1	68	61.500	ENSHGLG00000019481	CMSS1	93	59.483	Heterocephalus_glaber_female
ENSPREG00000007618	cmss1	68	61.500	ENSHGLG00100010314	CMSS1	91	59.483	Heterocephalus_glaber_male
ENSPREG00000007618	cmss1	86	71.654	ENSHCOG00000003222	cmss1	85	71.654	Hippocampus_comes
ENSPREG00000007618	cmss1	85	62.400	ENSIPUG00000011591	cmss1	90	60.920	Ictalurus_punctatus
ENSPREG00000007618	cmss1	69	61.881	ENSSTOG00000019366	CMSS1	85	57.261	Ictidomys_tridecemlineatus
ENSPREG00000007618	cmss1	74	59.361	ENSJJAG00000014894	Cmss1	97	59.361	Jaculus_jaculus
ENSPREG00000007618	cmss1	91	64.312	ENSKMAG00000002390	cmss1	96	64.479	Kryptolebias_marmoratus
ENSPREG00000007618	cmss1	69	75.980	ENSLBEG00000006298	cmss1	98	66.038	Labrus_bergylta
ENSPREG00000007618	cmss1	69	63.366	ENSLACG00000009293	CMSS1	88	63.366	Latimeria_chalumnae
ENSPREG00000007618	cmss1	92	54.613	ENSLOCG00000009391	cmss1	89	56.322	Lepisosteus_oculatus
ENSPREG00000007618	cmss1	68	62.500	ENSLAFG00000017509	CMSS1	89	62.871	Loxodonta_africana
ENSPREG00000007618	cmss1	69	62.376	ENSMFAG00000045006	CMSS1	77	62.376	Macaca_fascicularis
ENSPREG00000007618	cmss1	69	61.881	ENSMMUG00000002939	CMSS1	97	58.744	Macaca_mulatta
ENSPREG00000007618	cmss1	69	62.376	ENSMNEG00000031315	CMSS1	77	62.376	Macaca_nemestrina
ENSPREG00000007618	cmss1	69	62.376	ENSMLEG00000033660	CMSS1	77	62.376	Mandrillus_leucophaeus
ENSPREG00000007618	cmss1	94	75.636	ENSMAMG00000017176	cmss1	89	79.231	Mastacembelus_armatus
ENSPREG00000007618	cmss1	90	78.868	ENSMZEG00005021886	cmss1	89	79.693	Maylandia_zebra
ENSPREG00000007618	cmss1	69	60.396	ENSMGAG00000014360	CMSS1	89	60.396	Meleagris_gallopavo
ENSPREG00000007618	cmss1	84	38.956	ENSMAUG00000020609	Cmss1	85	39.600	Mesocricetus_auratus
ENSPREG00000007618	cmss1	68	63.500	ENSMICG00000048977	CMSS1	90	59.751	Microcebus_murinus
ENSPREG00000007618	cmss1	69	61.881	ENSMOCG00000021937	Cmss1	73	61.881	Microtus_ochrogaster
ENSPREG00000007618	cmss1	87	66.797	ENSMMOG00000019794	cmss1	97	66.406	Mola_mola
ENSPREG00000007618	cmss1	93	53.480	ENSMODG00000002275	CMSS1	76	63.366	Monodelphis_domestica
ENSPREG00000007618	cmss1	89	75.940	ENSMALG00000004250	cmss1	90	75.758	Monopterus_albus
ENSPREG00000007618	cmss1	80	59.322	MGP_CAROLIEiJ_G0020824	Cmss1	82	60.435	Mus_caroli
ENSPREG00000007618	cmss1	80	58.898	ENSMUSG00000022748	Cmss1	82	60.000	Mus_musculus
ENSPREG00000007618	cmss1	69	61.881	MGP_PahariEiJ_G0016524	Cmss1	73	61.881	Mus_pahari
ENSPREG00000007618	cmss1	90	53.875	MGP_SPRETEiJ_G0021724	Cmss1	88	56.680	Mus_spretus
ENSPREG00000007618	cmss1	68	61.809	ENSMPUG00000011324	CMSS1	90	58.333	Mustela_putorius_furo
ENSPREG00000007618	cmss1	68	61.881	ENSMLUG00000001131	CMSS1	90	58.025	Myotis_lucifugus
ENSPREG00000007618	cmss1	98	50.871	ENSNGAG00000020316	Cmss1	84	56.846	Nannospalax_galili
ENSPREG00000007618	cmss1	90	78.868	ENSNBRG00000003095	cmss1	89	79.693	Neolamprologus_brichardi
ENSPREG00000007618	cmss1	68	62.500	ENSNLEG00000034172	CMSS1	89	59.322	Nomascus_leucogenys
ENSPREG00000007618	cmss1	69	52.970	ENSMEUG00000014505	CMSS1	99	50.000	Notamacropus_eugenii
ENSPREG00000007618	cmss1	69	62.871	ENSOPRG00000002986	CMSS1	73	62.871	Ochotona_princeps
ENSPREG00000007618	cmss1	69	54.455	ENSODEG00000009446	-	78	54.455	Octodon_degus
ENSPREG00000007618	cmss1	68	62.500	ENSODEG00000005226	-	83	58.898	Octodon_degus
ENSPREG00000007618	cmss1	90	48.106	ENSODEG00000001853	-	71	53.465	Octodon_degus
ENSPREG00000007618	cmss1	90	53.759	ENSODEG00000003558	-	84	58.009	Octodon_degus
ENSPREG00000007618	cmss1	89	79.693	ENSONIG00000006678	cmss1	99	80.077	Oreochromis_niloticus
ENSPREG00000007618	cmss1	93	52.555	ENSOANG00000007529	CMSS1	99	56.652	Ornithorhynchus_anatinus
ENSPREG00000007618	cmss1	84	56.627	ENSOCUG00000025366	CMSS1	85	59.167	Oryctolagus_cuniculus
ENSPREG00000007618	cmss1	89	75.096	ENSORLG00000020340	cmss1	90	75.096	Oryzias_latipes
ENSPREG00000007618	cmss1	72	72.770	ENSORLG00020012235	cmss1	97	61.686	Oryzias_latipes_hni
ENSPREG00000007618	cmss1	90	63.333	ENSORLG00015015551	cmss1	98	63.910	Oryzias_latipes_hsok
ENSPREG00000007618	cmss1	89	74.905	ENSOMEG00000012555	cmss1	89	75.862	Oryzias_melastigma
ENSPREG00000007618	cmss1	69	63.861	ENSOGAG00000002045	CMSS1	89	63.861	Otolemur_garnettii
ENSPREG00000007618	cmss1	69	62.562	ENSOARG00000017899	CMSS1	78	59.657	Ovis_aries
ENSPREG00000007618	cmss1	90	54.307	ENSPPAG00000038515	CMSS1	85	58.898	Pan_paniscus
ENSPREG00000007618	cmss1	88	55.939	ENSPPRG00000016767	CMSS1	92	55.939	Panthera_pardus
ENSPREG00000007618	cmss1	88	55.939	ENSPTIG00000018274	CMSS1	84	60.000	Panthera_tigris_altaica
ENSPREG00000007618	cmss1	69	62.376	ENSPTRG00000015157	CMSS1	95	58.898	Pan_troglodytes
ENSPREG00000007618	cmss1	69	62.871	ENSPANG00000019980	CMSS1	90	60.173	Papio_anubis
ENSPREG00000007618	cmss1	93	61.029	ENSPKIG00000012609	cmss1	96	63.774	Paramormyrops_kingsleyae
ENSPREG00000007618	cmss1	69	61.881	ENSPSIG00000003849	CMSS1	88	61.881	Pelodiscus_sinensis
ENSPREG00000007618	cmss1	69	75.000	ENSPMGG00000010286	cmss1	99	71.616	Periophthalmus_magnuspinnatus
ENSPREG00000007618	cmss1	90	52.593	ENSPEMG00000016384	Cmss1	89	54.724	Peromyscus_maniculatus_bairdii
ENSPREG00000007618	cmss1	69	50.490	ENSPMAG00000001146	cmss1	99	50.739	Petromyzon_marinus
ENSPREG00000007618	cmss1	69	61.881	ENSPCIG00000015656	CMSS1	93	55.777	Phascolarctos_cinereus
ENSPREG00000007618	cmss1	95	94.604	ENSPFOG00000016849	cmss1	97	94.604	Poecilia_formosa
ENSPREG00000007618	cmss1	95	94.245	ENSPLAG00000008323	cmss1	97	94.245	Poecilia_latipinna
ENSPREG00000007618	cmss1	89	96.169	ENSPMEG00000021020	cmss1	95	96.000	Poecilia_mexicana
ENSPREG00000007618	cmss1	69	62.871	ENSPPYG00000013606	CMSS1	85	59.322	Pongo_abelii
ENSPREG00000007618	cmss1	90	56.000	ENSPCOG00000020035	CMSS1	90	59.751	Propithecus_coquereli
ENSPREG00000007618	cmss1	82	50.417	ENSPVAG00000017031	CMSS1	84	49.793	Pteropus_vampyrus
ENSPREG00000007618	cmss1	81	79.079	ENSPNYG00000013428	cmss1	86	80.000	Pundamilia_nyererei
ENSPREG00000007618	cmss1	89	59.316	ENSPNAG00000007912	cmss1	88	60.536	Pygocentrus_nattereri
ENSPREG00000007618	cmss1	82	58.678	ENSRNOG00000027888	Cmss1	92	58.678	Rattus_norvegicus
ENSPREG00000007618	cmss1	69	62.376	ENSRBIG00000037931	CMSS1	77	62.376	Rhinopithecus_bieti
ENSPREG00000007618	cmss1	69	62.376	ENSRROG00000042910	CMSS1	77	62.376	Rhinopithecus_roxellana
ENSPREG00000007618	cmss1	82	59.583	ENSSBOG00000030980	CMSS1	89	59.583	Saimiri_boliviensis_boliviensis
ENSPREG00000007618	cmss1	69	62.871	ENSSHAG00000009321	CMSS1	80	62.871	Sarcophilus_harrisii
ENSPREG00000007618	cmss1	78	68.696	ENSSFOG00015001509	cmss1	85	66.798	Scleropages_formosus
ENSPREG00000007618	cmss1	87	77.734	ENSSMAG00000001653	cmss1	90	76.806	Scophthalmus_maximus
ENSPREG00000007618	cmss1	94	76.895	ENSSDUG00000007719	cmss1	95	79.783	Seriola_dumerili
ENSPREG00000007618	cmss1	96	72.414	ENSSLDG00000012300	cmss1	93	79.556	Seriola_lalandi_dorsalis
ENSPREG00000007618	cmss1	69	51.980	ENSSARG00000003584	CMSS1	72	51.980	Sorex_araneus
ENSPREG00000007618	cmss1	69	60.396	ENSSPUG00000003865	CMSS1	89	60.396	Sphenodon_punctatus
ENSPREG00000007618	cmss1	94	74.729	ENSSPAG00000019182	cmss1	83	74.729	Stegastes_partitus
ENSPREG00000007618	cmss1	68	61.500	ENSSSCG00000011970	CMSS1	84	58.091	Sus_scrofa
ENSPREG00000007618	cmss1	69	59.406	ENSTGUG00000013635	CMSS1	88	59.406	Taeniopygia_guttata
ENSPREG00000007618	cmss1	94	64.364	ENSTRUG00000015265	cmss1	89	69.412	Takifugu_rubripes
ENSPREG00000007618	cmss1	69	69.951	ENSTNIG00000002880	cmss1	94	63.636	Tetraodon_nigroviridis
ENSPREG00000007618	cmss1	69	43.564	ENSTBEG00000016722	CMSS1	72	43.564	Tupaia_belangeri
ENSPREG00000007618	cmss1	84	56.225	ENSTTRG00000001562	CMSS1	88	55.600	Tursiops_truncatus
ENSPREG00000007618	cmss1	82	57.917	ENSUAMG00000024209	CMSS1	95	59.227	Ursus_americanus
ENSPREG00000007618	cmss1	69	62.376	ENSUMAG00000001983	CMSS1	90	58.475	Ursus_maritimus
ENSPREG00000007618	cmss1	54	60.625	ENSVPAG00000000263	CMSS1	57	60.625	Vicugna_pacos
ENSPREG00000007618	cmss1	68	61.500	ENSVVUG00000021647	-	98	56.680	Vulpes_vulpes
ENSPREG00000007618	cmss1	69	60.891	ENSVVUG00000007776	-	80	60.891	Vulpes_vulpes
ENSPREG00000007618	cmss1	94	53.455	ENSXETG00000011858	cmss1	92	52.273	Xenopus_tropicalis
ENSPREG00000007618	cmss1	94	86.957	ENSXCOG00000018724	cmss1	100	86.395	Xiphophorus_couchianus
ENSPREG00000007618	cmss1	91	86.891	ENSXMAG00000011243	cmss1	98	86.973	Xiphophorus_maculatus