EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000007715 (Gene tree)
Gene ID: 103466620
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 9377 bases
Position: chrLG6:23935463-23944839
Accession: 103466620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011340	HRDC	PF00570.23	2.4e-13	1	1
ENSPREP00000011311	HRDC	PF00570.23	2.5e-13	1	1
ENSPREP00000011340	BDHCT	PF08072.11	5.3e-19	1	1
ENSPREP00000011311	BDHCT	PF08072.11	5.5e-19	1	1
ENSPREP00000011340	DEAD	PF00270.29	2.7e-18	1	1
ENSPREP00000011311	DEAD	PF00270.29	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011467	-	4110	XM_008412329	ENSPREP00000011340	1369 (aa)	XP_008410551	UPI0004A4094C
ENSPRET00000011438	-	4200	XM_008412328	ENSPREP00000011311	1399 (aa)	XP_008410550	UPI0004A34DA1

Gene Model

Click here to download ENSPREG00000007715's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03440	Homologous recombination	KEGG
pret03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007715	blm	59	65.045	ENSG00000197299	BLM	54	73.361	Homo_sapiens
ENSPREG00000007715	blm	100	71.058	ENSAPOG00000017966	blm	100	70.427	Acanthochromis_polyacanthus
ENSPREG00000007715	blm	60	64.231	ENSAMEG00000013843	BLM	55	63.846	Ailuropoda_melanoleuca
ENSPREG00000007715	blm	100	72.155	ENSACIG00000023762	blm	100	71.711	Amphilophus_citrinellus
ENSPREG00000007715	blm	100	70.959	ENSAOCG00000003318	blm	100	70.150	Amphiprion_ocellaris
ENSPREG00000007715	blm	100	71.148	ENSAPEG00000018105	blm	100	70.427	Amphiprion_percula
ENSPREG00000007715	blm	99	69.532	ENSATEG00000006421	blm	100	68.903	Anabas_testudineus
ENSPREG00000007715	blm	79	51.286	ENSAPLG00000006878	BLM	72	60.809	Anas_platyrhynchos
ENSPREG00000007715	blm	59	65.301	ENSACAG00000014275	BLM	84	65.161	Anolis_carolinensis
ENSPREG00000007715	blm	75	52.799	ENSANAG00000038415	BLM	53	69.639	Aotus_nancymaae
ENSPREG00000007715	blm	100	71.368	ENSACLG00000020354	blm	100	71.067	Astatotilapia_calliptera
ENSPREG00000007715	blm	99	54.739	ENSAMXG00000016970	blm	87	72.288	Astyanax_mexicanus
ENSPREG00000007715	blm	76	52.233	ENSCJAG00000009803	BLM	50	73.566	Callithrix_jacchus
ENSPREG00000007715	blm	59	62.728	ENSCAFG00000012385	BLM	58	62.607	Canis_familiaris
ENSPREG00000007715	blm	59	62.728	ENSCAFG00020016111	BLM	92	64.314	Canis_lupus_dingo
ENSPREG00000007715	blm	56	64.676	ENSCHIG00000010329	BLM	51	78.320	Capra_hircus
ENSPREG00000007715	blm	56	64.405	ENSTSYG00000012368	BLM	51	72.131	Carlito_syrichta
ENSPREG00000007715	blm	63	69.002	ENSCAPG00000017976	BLM	77	69.002	Cavia_aperea
ENSPREG00000007715	blm	59	61.501	ENSCPOG00000001761	BLM	59	61.501	Cavia_porcellus
ENSPREG00000007715	blm	78	54.167	ENSCCAG00000023069	BLM	55	73.361	Cebus_capucinus
ENSPREG00000007715	blm	56	64.917	ENSCATG00000040609	BLM	75	75.082	Cercocebus_atys
ENSPREG00000007715	blm	99	45.646	ENSCLAG00000012111	BLM	59	61.825	Chinchilla_lanigera
ENSPREG00000007715	blm	56	65.045	ENSCSAG00000017040	BLM	55	65.173	Chlorocebus_sabaeus
ENSPREG00000007715	blm	50	59.259	ENSCHOG00000006255	BLM	50	59.259	Choloepus_hoffmanni
ENSPREG00000007715	blm	82	50.831	ENSCPBG00000025000	BLM	72	68.194	Chrysemys_picta_bellii
ENSPREG00000007715	blm	56	65.891	ENSCGRG00001024897	Blm	55	65.891	Cricetulus_griseus_chok1gshd
ENSPREG00000007715	blm	95	65.742	ENSCSEG00000013483	blm	98	66.616	Cynoglossus_semilaevis
ENSPREG00000007715	blm	76	78.017	ENSCVAG00000017583	blm	97	75.127	Cyprinodon_variegatus
ENSPREG00000007715	blm	99	57.429	ENSDARG00000077089	blm	100	56.777	Danio_rerio
ENSPREG00000007715	blm	60	64.066	ENSDNOG00000010159	BLM	59	64.194	Dasypus_novemcinctus
ENSPREG00000007715	blm	59	61.985	ENSDORG00000011033	Blm	79	62.107	Dipodomys_ordii
ENSPREG00000007715	blm	57	40.898	FBgn0002906	Blm	52	41.228	Drosophila_melanogaster
ENSPREG00000007715	blm	52	51.793	ENSETEG00000015019	BLM	52	51.793	Echinops_telfairi
ENSPREG00000007715	blm	56	61.190	ENSEASG00005006727	BLM	54	61.140	Equus_asinus_asinus
ENSPREG00000007715	blm	56	64.570	ENSECAG00000011405	BLM	55	64.524	Equus_caballus
ENSPREG00000007715	blm	59	63.683	ENSEEUG00000001434	BLM	59	63.171	Erinaceus_europaeus
ENSPREG00000007715	blm	99	57.038	ENSELUG00000019098	blm	99	56.091	Esox_lucius
ENSPREG00000007715	blm	64	64.578	ENSFCAG00000006087	BLM	59	72.393	Felis_catus
ENSPREG00000007715	blm	76	53.542	ENSFALG00000010981	BLM	68	62.057	Ficedula_albicollis
ENSPREG00000007715	blm	100	79.507	ENSFHEG00000002553	blm	100	78.929	Fundulus_heteroclitus
ENSPREG00000007715	blm	99	59.351	ENSGMOG00000016431	blm	98	69.930	Gadus_morhua
ENSPREG00000007715	blm	82	50.959	ENSGALG00000008256	BLM	58	63.442	Gallus_gallus
ENSPREG00000007715	blm	100	92.560	ENSGAFG00000001117	blm	100	92.852	Gambusia_affinis
ENSPREG00000007715	blm	99	65.925	ENSGACG00000010863	blm	100	87.500	Gasterosteus_aculeatus
ENSPREG00000007715	blm	65	56.352	ENSGAGG00000005383	BLM	77	66.224	Gopherus_agassizii
ENSPREG00000007715	blm	59	64.789	ENSGGOG00000007710	BLM	75	75.082	Gorilla_gorilla
ENSPREG00000007715	blm	100	71.141	ENSHBUG00000015943	blm	100	71.357	Haplochromis_burtoni
ENSPREG00000007715	blm	85	63.567	ENSHGLG00000013231	BLM	62	63.567	Heterocephalus_glaber_female
ENSPREG00000007715	blm	74	67.847	ENSHCOG00000011455	blm	100	67.216	Hippocampus_comes
ENSPREG00000007715	blm	75	63.168	ENSIPUG00000000529	blm	86	61.808	Ictalurus_punctatus
ENSPREG00000007715	blm	56	64.450	ENSSTOG00000005000	BLM	55	64.487	Ictidomys_tridecemlineatus
ENSPREG00000007715	blm	56	57.545	ENSJJAG00000016322	Blm	73	53.257	Jaculus_jaculus
ENSPREG00000007715	blm	100	76.081	ENSKMAG00000016608	blm	100	75.432	Kryptolebias_marmoratus
ENSPREG00000007715	blm	60	78.271	ENSLBEG00000018729	blm	96	78.303	Labrus_bergylta
ENSPREG00000007715	blm	60	68.734	ENSLACG00000006490	BLM	57	68.354	Latimeria_chalumnae
ENSPREG00000007715	blm	99	51.701	ENSLOCG00000014302	blm	87	68.794	Lepisosteus_oculatus
ENSPREG00000007715	blm	56	65.173	ENSMFAG00000042982	BLM	75	75.410	Macaca_fascicularis
ENSPREG00000007715	blm	56	65.173	ENSMMUG00000019526	BLM	75	75.410	Macaca_mulatta
ENSPREG00000007715	blm	56	64.917	ENSMNEG00000031251	BLM	75	75.082	Macaca_nemestrina
ENSPREG00000007715	blm	56	61.538	ENSMLEG00000032934	BLM	54	61.667	Mandrillus_leucophaeus
ENSPREG00000007715	blm	99	69.308	ENSMAMG00000008726	blm	99	69.496	Mastacembelus_armatus
ENSPREG00000007715	blm	100	70.154	ENSMZEG00005022323	blm	100	70.105	Maylandia_zebra
ENSPREG00000007715	blm	85	65.128	ENSMAUG00000008953	Blm	60	65.513	Mesocricetus_auratus
ENSPREG00000007715	blm	56	64.295	ENSMICG00000034442	BLM	50	73.156	Microcebus_murinus
ENSPREG00000007715	blm	56	65.810	ENSMOCG00000016367	Blm	58	65.597	Microtus_ochrogaster
ENSPREG00000007715	blm	100	67.264	ENSMMOG00000006959	blm	100	66.356	Mola_mola
ENSPREG00000007715	blm	99	45.017	ENSMODG00000019449	BLM	54	65.223	Monodelphis_domestica
ENSPREG00000007715	blm	100	70.178	ENSMALG00000007323	blm	100	70.185	Monopterus_albus
ENSPREG00000007715	blm	56	65.116	MGP_CAROLIEiJ_G0029907	Blm	55	64.987	Mus_caroli
ENSPREG00000007715	blm	56	65.116	ENSMUSG00000030528	Blm	54	65.116	Mus_musculus
ENSPREG00000007715	blm	56	65.633	MGP_PahariEiJ_G0013129	Blm	55	65.504	Mus_pahari
ENSPREG00000007715	blm	56	65.290	MGP_SPRETEiJ_G0031009	Blm	55	65.290	Mus_spretus
ENSPREG00000007715	blm	56	64.631	ENSMLUG00000014697	BLM	55	64.249	Myotis_lucifugus
ENSPREG00000007715	blm	100	70.323	ENSNBRG00000019702	blm	100	70.344	Neolamprologus_brichardi
ENSPREG00000007715	blm	56	62.356	ENSNLEG00000012087	BLM	74	60.814	Nomascus_leucogenys
ENSPREG00000007715	blm	79	48.350	ENSMEUG00000007253	BLM	54	61.651	Notamacropus_eugenii
ENSPREG00000007715	blm	52	64.665	ENSOPRG00000011667	BLM	51	64.246	Ochotona_princeps
ENSPREG00000007715	blm	74	50.571	ENSODEG00000015373	BLM	80	56.611	Octodon_degus
ENSPREG00000007715	blm	100	68.432	ENSONIG00000015193	blm	100	68.569	Oreochromis_niloticus
ENSPREG00000007715	blm	55	64.942	ENSOANG00000009316	-	99	64.812	Ornithorhynchus_anatinus
ENSPREG00000007715	blm	100	72.354	ENSORLG00000008110	blm	100	71.449	Oryzias_latipes
ENSPREG00000007715	blm	100	72.354	ENSORLG00020004812	blm	100	71.377	Oryzias_latipes_hni
ENSPREG00000007715	blm	100	72.066	ENSORLG00015018640	blm	100	72.762	Oryzias_latipes_hsok
ENSPREG00000007715	blm	100	71.460	ENSOMEG00000023545	blm	100	71.315	Oryzias_melastigma
ENSPREG00000007715	blm	59	65.301	ENSPPAG00000032173	BLM	54	73.566	Pan_paniscus
ENSPREG00000007715	blm	56	63.811	ENSPTIG00000016168	BLM	50	72.154	Panthera_tigris_altaica
ENSPREG00000007715	blm	59	65.000	ENSPTRG00000007460	BLM	54	73.511	Pan_troglodytes
ENSPREG00000007715	blm	56	65.045	ENSPANG00000018572	BLM	75	75.410	Papio_anubis
ENSPREG00000007715	blm	99	55.163	ENSPKIG00000008954	blm	87	71.429	Paramormyrops_kingsleyae
ENSPREG00000007715	blm	70	68.528	ENSPMGG00000006629	blm	100	69.036	Periophthalmus_magnuspinnatus
ENSPREG00000007715	blm	79	51.033	ENSPCIG00000006609	BLM	58	61.366	Phascolarctos_cinereus
ENSPREG00000007715	blm	100	96.350	ENSPFOG00000005059	blm	100	96.350	Poecilia_formosa
ENSPREG00000007715	blm	100	95.036	ENSPLAG00000017344	blm	100	95.328	Poecilia_latipinna
ENSPREG00000007715	blm	100	96.429	ENSPMEG00000000321	blm	100	96.429	Poecilia_mexicana
ENSPREG00000007715	blm	56	64.020	ENSPPYG00000006784	BLM	55	64.277	Pongo_abelii
ENSPREG00000007715	blm	59	60.917	ENSPCAG00000008960	BLM	59	60.314	Procavia_capensis
ENSPREG00000007715	blm	56	56.450	ENSPCOG00000000439	BLM	56	59.524	Propithecus_coquereli
ENSPREG00000007715	blm	70	75.415	ENSPVAG00000011642	BLM	59	75.415	Pteropus_vampyrus
ENSPREG00000007715	blm	100	63.649	ENSPNYG00000010956	blm	100	63.528	Pundamilia_nyererei
ENSPREG00000007715	blm	100	57.542	ENSPNAG00000011714	blm	100	57.331	Pygocentrus_nattereri
ENSPREG00000007715	blm	56	65.000	ENSRNOG00000011213	Blm	55	65.128	Rattus_norvegicus
ENSPREG00000007715	blm	59	64.405	ENSRBIG00000029656	BLM	75	75.082	Rhinopithecus_bieti
ENSPREG00000007715	blm	50	72.746	ENSRROG00000037871	BLM	75	75.082	Rhinopithecus_roxellana
ENSPREG00000007715	blm	71	54.167	ENSSBOG00000030957	BLM	54	72.951	Saimiri_boliviensis_boliviensis
ENSPREG00000007715	blm	79	50.815	ENSSHAG00000007988	BLM	61	61.150	Sarcophilus_harrisii
ENSPREG00000007715	blm	76	63.153	ENSSFOG00015015462	blm	80	62.488	Scleropages_formosus
ENSPREG00000007715	blm	100	68.674	ENSSMAG00000001120	blm	100	68.651	Scophthalmus_maximus
ENSPREG00000007715	blm	100	70.442	ENSSDUG00000010955	blm	100	69.729	Seriola_dumerili
ENSPREG00000007715	blm	100	69.850	ENSSLDG00000000634	blm	100	68.924	Seriola_lalandi_dorsalis
ENSPREG00000007715	blm	59	59.615	ENSSARG00000006398	BLM	62	59.640	Sorex_araneus
ENSPREG00000007715	blm	75	53.340	ENSSPUG00000000013	BLM	69	63.742	Sphenodon_punctatus
ENSPREG00000007715	blm	99	71.027	ENSSPAG00000013999	blm	99	71.227	Stegastes_partitus
ENSPREG00000007715	blm	61	64.463	ENSSSCG00000001816	BLM	62	64.050	Sus_scrofa
ENSPREG00000007715	blm	79	46.497	ENSTGUG00000009959	-	84	55.172	Taeniopygia_guttata
ENSPREG00000007715	blm	99	64.735	ENSTRUG00000019860	blm	99	64.306	Takifugu_rubripes
ENSPREG00000007715	blm	94	69.037	ENSTNIG00000019246	blm	95	68.803	Tetraodon_nigroviridis
ENSPREG00000007715	blm	56	65.122	ENSTTRG00000016386	BLM	55	64.607	Tursiops_truncatus
ENSPREG00000007715	blm	71	54.162	ENSUMAG00000009105	BLM	96	66.482	Ursus_maritimus
ENSPREG00000007715	blm	64	61.232	ENSVPAG00000000085	BLM	64	61.232	Vicugna_pacos
ENSPREG00000007715	blm	64	64.011	ENSVVUG00000006402	BLM	67	63.736	Vulpes_vulpes
ENSPREG00000007715	blm	99	47.622	ENSXETG00000007847	blm	55	66.624	Xenopus_tropicalis
ENSPREG00000007715	blm	100	90.079	ENSXCOG00000020227	blm	100	90.364	Xiphophorus_couchianus
ENSPREG00000007715	blm	100	92.363	ENSXMAG00000002951	blm	100	92.648	Xiphophorus_maculatus