EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000007815 (Gene tree)
Gene ID: 103464410
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 6726 bases
Position: chrLG5:7964727-7971452
Accession: 103464410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011475	dsrm	PF00035.26	6.2e-35	1	2
ENSPREP00000011475	dsrm	PF00035.26	6.2e-35	2	2
ENSPREP00000011475	DND1_DSRM	PF14709.7	9.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011602	-	1327	XM_008408482	ENSPREP00000011475	345 (aa)	XP_008406704	UPI0004A28B67

Gene Model

Click here to download ENSPREG00000007815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000007815	tarbp2	92	41.824	ENSPREG00000005680	prkra	91	41.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007815	tarbp2	100	65.574	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSPREG00000007815	tarbp2	100	92.464	ENSAPOG00000019892	tarbp2	100	92.464	Acanthochromis_polyacanthus
ENSPREG00000007815	tarbp2	100	65.574	ENSAMEG00000012601	TARBP2	100	66.120	Ailuropoda_melanoleuca
ENSPREG00000007815	tarbp2	100	89.565	ENSACIG00000016780	tarbp2	100	89.565	Amphilophus_citrinellus
ENSPREG00000007815	tarbp2	100	91.884	ENSAOCG00000005201	tarbp2	100	91.884	Amphiprion_ocellaris
ENSPREG00000007815	tarbp2	100	91.884	ENSAPEG00000008376	tarbp2	100	91.884	Amphiprion_percula
ENSPREG00000007815	tarbp2	100	91.014	ENSATEG00000025012	tarbp2	100	91.014	Anabas_testudineus
ENSPREG00000007815	tarbp2	99	69.916	ENSACAG00000001100	TARBP2	99	69.916	Anolis_carolinensis
ENSPREG00000007815	tarbp2	100	65.574	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSPREG00000007815	tarbp2	97	88.657	ENSACLG00000018569	tarbp2	97	88.657	Astatotilapia_calliptera
ENSPREG00000007815	tarbp2	100	81.356	ENSAMXG00000016665	tarbp2	100	84.104	Astyanax_mexicanus
ENSPREG00000007815	tarbp2	100	66.667	ENSBTAG00000000435	TARBP2	100	67.213	Bos_taurus
ENSPREG00000007815	tarbp2	100	65.847	ENSCJAG00000018668	TARBP2	100	66.393	Callithrix_jacchus
ENSPREG00000007815	tarbp2	100	68.588	ENSCAFG00000006874	TARBP2	100	68.588	Canis_familiaris
ENSPREG00000007815	tarbp2	100	65.847	ENSCAFG00020020735	TARBP2	100	68.406	Canis_lupus_dingo
ENSPREG00000007815	tarbp2	100	64.706	ENSCHIG00000026017	TARBP2	100	65.946	Capra_hircus
ENSPREG00000007815	tarbp2	100	66.120	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSPREG00000007815	tarbp2	65	70.222	ENSCAPG00000008981	TARBP2	100	70.222	Cavia_aperea
ENSPREG00000007815	tarbp2	100	66.940	ENSCPOG00000001009	TARBP2	100	66.940	Cavia_porcellus
ENSPREG00000007815	tarbp2	95	67.908	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSPREG00000007815	tarbp2	100	65.301	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSPREG00000007815	tarbp2	100	66.667	ENSCLAG00000009175	TARBP2	100	66.667	Chinchilla_lanigera
ENSPREG00000007815	tarbp2	100	65.301	ENSCSAG00000005479	TARBP2	100	66.120	Chlorocebus_sabaeus
ENSPREG00000007815	tarbp2	100	69.806	ENSCPBG00000000654	TARBP2	100	71.765	Chrysemys_picta_bellii
ENSPREG00000007815	tarbp2	100	65.574	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSPREG00000007815	tarbp2	100	64.674	ENSCGRG00001011856	TARBP2	100	65.753	Cricetulus_griseus_chok1gshd
ENSPREG00000007815	tarbp2	100	64.674	ENSCGRG00000009088	TARBP2	100	67.901	Cricetulus_griseus_crigri
ENSPREG00000007815	tarbp2	100	89.565	ENSCSEG00000010631	tarbp2	100	89.565	Cynoglossus_semilaevis
ENSPREG00000007815	tarbp2	100	95.652	ENSCVAG00000009832	tarbp2	100	95.652	Cyprinodon_variegatus
ENSPREG00000007815	tarbp2	100	82.184	ENSDARG00000070471	tarbp2	100	82.471	Danio_rerio
ENSPREG00000007815	tarbp2	100	66.120	ENSDNOG00000002144	TARBP2	100	66.393	Dasypus_novemcinctus
ENSPREG00000007815	tarbp2	63	71.041	ENSDORG00000001390	Tarbp2	91	71.041	Dipodomys_ordii
ENSPREG00000007815	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSPREG00000007815	tarbp2	95	57.927	ENSEBUG00000002377	tarbp2	98	58.841	Eptatretus_burgeri
ENSPREG00000007815	tarbp2	100	66.940	ENSEASG00005010030	TARBP2	100	66.940	Equus_asinus_asinus
ENSPREG00000007815	tarbp2	100	68.091	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSPREG00000007815	tarbp2	84	63.175	ENSEEUG00000001128	-	99	62.500	Erinaceus_europaeus
ENSPREG00000007815	tarbp2	100	85.632	ENSELUG00000010642	tarbp2	100	87.393	Esox_lucius
ENSPREG00000007815	tarbp2	100	66.393	ENSFCAG00000007757	TARBP2	100	66.940	Felis_catus
ENSPREG00000007815	tarbp2	100	66.667	ENSFDAG00000011932	TARBP2	100	69.672	Fukomys_damarensis
ENSPREG00000007815	tarbp2	94	95.679	ENSFHEG00000016118	tarbp2	100	95.679	Fundulus_heteroclitus
ENSPREG00000007815	tarbp2	100	84.438	ENSGMOG00000001290	tarbp2	100	84.438	Gadus_morhua
ENSPREG00000007815	tarbp2	63	72.146	ENSGALG00000038939	-	83	72.146	Gallus_gallus
ENSPREG00000007815	tarbp2	100	97.971	ENSGAFG00000013341	tarbp2	100	97.971	Gambusia_affinis
ENSPREG00000007815	tarbp2	100	87.324	ENSGACG00000006645	tarbp2	100	87.606	Gasterosteus_aculeatus
ENSPREG00000007815	tarbp2	100	70.083	ENSGAGG00000021169	TARBP2	100	69.806	Gopherus_agassizii
ENSPREG00000007815	tarbp2	95	67.908	ENSGGOG00000012637	TARBP2	72	92.982	Gorilla_gorilla
ENSPREG00000007815	tarbp2	100	90.145	ENSHBUG00000018639	tarbp2	100	90.145	Haplochromis_burtoni
ENSPREG00000007815	tarbp2	100	66.393	ENSHGLG00000001284	TARBP2	100	66.393	Heterocephalus_glaber_female
ENSPREG00000007815	tarbp2	100	66.393	ENSHGLG00100011274	TARBP2	100	66.393	Heterocephalus_glaber_male
ENSPREG00000007815	tarbp2	100	85.797	ENSHCOG00000001027	tarbp2	100	85.797	Hippocampus_comes
ENSPREG00000007815	tarbp2	100	81.375	ENSIPUG00000023701	tarbp2	100	81.375	Ictalurus_punctatus
ENSPREG00000007815	tarbp2	95	69.054	ENSSTOG00000003678	TARBP2	100	68.852	Ictidomys_tridecemlineatus
ENSPREG00000007815	tarbp2	100	92.754	ENSKMAG00000012142	tarbp2	100	92.754	Kryptolebias_marmoratus
ENSPREG00000007815	tarbp2	100	89.548	ENSLBEG00000015027	tarbp2	100	89.548	Labrus_bergylta
ENSPREG00000007815	tarbp2	95	66.159	ENSLACG00000007087	TARBP2	95	66.869	Latimeria_chalumnae
ENSPREG00000007815	tarbp2	100	80.460	ENSLOCG00000005711	tarbp2	100	80.460	Lepisosteus_oculatus
ENSPREG00000007815	tarbp2	71	65.267	ENSLAFG00000002620	TARBP2	93	65.267	Loxodonta_africana
ENSPREG00000007815	tarbp2	100	65.301	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSPREG00000007815	tarbp2	100	65.574	ENSMMUG00000018492	TARBP2	100	66.393	Macaca_mulatta
ENSPREG00000007815	tarbp2	100	65.301	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSPREG00000007815	tarbp2	100	65.301	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSPREG00000007815	tarbp2	95	89.602	ENSMAMG00000010272	tarbp2	97	88.081	Mastacembelus_armatus
ENSPREG00000007815	tarbp2	100	89.855	ENSMZEG00005006895	tarbp2	100	89.855	Maylandia_zebra
ENSPREG00000007815	tarbp2	100	64.402	ENSMAUG00000019805	Tarbp2	100	66.301	Mesocricetus_auratus
ENSPREG00000007815	tarbp2	94	68.406	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSPREG00000007815	tarbp2	100	65.940	ENSMOCG00000003691	Tarbp2	100	65.940	Microtus_ochrogaster
ENSPREG00000007815	tarbp2	94	89.091	ENSMMOG00000010374	tarbp2	100	89.091	Mola_mola
ENSPREG00000007815	tarbp2	100	89.855	ENSMALG00000009773	tarbp2	100	89.855	Monopterus_albus
ENSPREG00000007815	tarbp2	100	65.479	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSPREG00000007815	tarbp2	100	65.479	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSPREG00000007815	tarbp2	100	65.479	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSPREG00000007815	tarbp2	100	65.479	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSPREG00000007815	tarbp2	100	66.575	ENSMPUG00000005944	TARBP2	100	66.575	Mustela_putorius_furo
ENSPREG00000007815	tarbp2	100	67.213	ENSMLUG00000010035	TARBP2	100	67.213	Myotis_lucifugus
ENSPREG00000007815	tarbp2	100	65.574	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSPREG00000007815	tarbp2	100	69.653	ENSMEUG00000001916	TARBP2	100	69.653	Notamacropus_eugenii
ENSPREG00000007815	tarbp2	65	71.556	ENSOPRG00000011397	TARBP2	100	71.556	Ochotona_princeps
ENSPREG00000007815	tarbp2	60	72.566	ENSODEG00000013413	TARBP2	100	72.566	Octodon_degus
ENSPREG00000007815	tarbp2	95	85.920	ENSONIG00000005115	tarbp2	96	85.920	Oreochromis_niloticus
ENSPREG00000007815	tarbp2	100	68.033	ENSOCUG00000005700	TARBP2	100	68.033	Oryctolagus_cuniculus
ENSPREG00000007815	tarbp2	100	90.725	ENSORLG00000005209	tarbp2	100	90.725	Oryzias_latipes
ENSPREG00000007815	tarbp2	100	90.435	ENSORLG00020017755	tarbp2	100	90.435	Oryzias_latipes_hni
ENSPREG00000007815	tarbp2	100	90.725	ENSORLG00015013237	tarbp2	100	90.725	Oryzias_latipes_hsok
ENSPREG00000007815	tarbp2	100	91.594	ENSOMEG00000018860	tarbp2	100	91.594	Oryzias_melastigma
ENSPREG00000007815	tarbp2	100	64.343	ENSOGAG00000001744	TARBP2	100	65.847	Otolemur_garnettii
ENSPREG00000007815	tarbp2	100	66.393	ENSOARG00000016437	TARBP2	100	66.940	Ovis_aries
ENSPREG00000007815	tarbp2	100	65.574	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSPREG00000007815	tarbp2	100	66.393	ENSPPRG00000000189	TARBP2	100	66.940	Panthera_pardus
ENSPREG00000007815	tarbp2	100	67.308	ENSPTIG00000007859	TARBP2	100	67.308	Panthera_tigris_altaica
ENSPREG00000007815	tarbp2	100	65.574	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSPREG00000007815	tarbp2	100	65.301	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSPREG00000007815	tarbp2	100	79.775	ENSPKIG00000002455	tarbp2	100	79.775	Paramormyrops_kingsleyae
ENSPREG00000007815	tarbp2	100	88.986	ENSPMGG00000006497	tarbp2	100	88.986	Periophthalmus_magnuspinnatus
ENSPREG00000007815	tarbp2	100	65.217	ENSPEMG00000014285	Tarbp2	100	64.384	Peromyscus_maniculatus_bairdii
ENSPREG00000007815	tarbp2	92	61.682	ENSPMAG00000000105	tarbp2	99	61.682	Petromyzon_marinus
ENSPREG00000007815	tarbp2	100	69.275	ENSPCIG00000006672	TARBP2	92	69.275	Phascolarctos_cinereus
ENSPREG00000007815	tarbp2	100	99.130	ENSPFOG00000007586	tarbp2	100	99.130	Poecilia_formosa
ENSPREG00000007815	tarbp2	100	98.841	ENSPLAG00000017659	tarbp2	100	98.841	Poecilia_latipinna
ENSPREG00000007815	tarbp2	100	99.130	ENSPMEG00000007775	tarbp2	100	99.130	Poecilia_mexicana
ENSPREG00000007815	tarbp2	95	67.372	ENSPPYG00000004583	TARBP2	95	68.072	Pongo_abelii
ENSPREG00000007815	tarbp2	78	63.918	ENSPCAG00000005352	TARBP2	63	70.000	Procavia_capensis
ENSPREG00000007815	tarbp2	100	66.393	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSPREG00000007815	tarbp2	100	65.312	ENSPVAG00000012286	TARBP2	100	65.312	Pteropus_vampyrus
ENSPREG00000007815	tarbp2	100	90.145	ENSPNYG00000014125	tarbp2	100	90.145	Pundamilia_nyererei
ENSPREG00000007815	tarbp2	100	84.393	ENSPNAG00000011128	tarbp2	100	84.682	Pygocentrus_nattereri
ENSPREG00000007815	tarbp2	100	64.932	ENSRNOG00000042355	Tarbp2	100	66.033	Rattus_norvegicus
ENSPREG00000007815	tarbp2	100	65.574	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSPREG00000007815	tarbp2	100	65.574	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSPREG00000007815	tarbp2	100	65.847	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSPREG00000007815	tarbp2	94	72.531	ENSSHAG00000007064	TARBP2	100	72.531	Sarcophilus_harrisii
ENSPREG00000007815	tarbp2	100	79.224	ENSSFOG00015010784	tarbp2	100	80.447	Scleropages_formosus
ENSPREG00000007815	tarbp2	100	90.598	ENSSMAG00000012769	tarbp2	100	90.598	Scophthalmus_maximus
ENSPREG00000007815	tarbp2	100	92.174	ENSSDUG00000018818	tarbp2	100	92.174	Seriola_dumerili
ENSPREG00000007815	tarbp2	100	91.594	ENSSLDG00000001835	tarbp2	100	91.594	Seriola_lalandi_dorsalis
ENSPREG00000007815	tarbp2	76	67.662	ENSSARG00000001010	TARBP2	73	67.662	Sorex_araneus
ENSPREG00000007815	tarbp2	99	52.478	ENSSPUG00000005895	TARBP2	98	53.179	Sphenodon_punctatus
ENSPREG00000007815	tarbp2	100	92.754	ENSSPAG00000022797	tarbp2	100	92.754	Stegastes_partitus
ENSPREG00000007815	tarbp2	100	65.847	ENSSSCG00000000276	TARBP2	100	68.116	Sus_scrofa
ENSPREG00000007815	tarbp2	71	55.725	ENSTGUG00000017031	TARBP2	70	80.328	Taeniopygia_guttata
ENSPREG00000007815	tarbp2	100	90.435	ENSTRUG00000014379	tarbp2	100	90.435	Takifugu_rubripes
ENSPREG00000007815	tarbp2	100	89.855	ENSTNIG00000007065	tarbp2	100	89.855	Tetraodon_nigroviridis
ENSPREG00000007815	tarbp2	100	65.847	ENSTTRG00000017177	TARBP2	100	66.667	Tursiops_truncatus
ENSPREG00000007815	tarbp2	100	66.120	ENSUAMG00000009011	TARBP2	100	66.667	Ursus_americanus
ENSPREG00000007815	tarbp2	100	65.574	ENSUMAG00000010461	TARBP2	100	66.120	Ursus_maritimus
ENSPREG00000007815	tarbp2	100	65.847	ENSVVUG00000028150	TARBP2	100	68.406	Vulpes_vulpes
ENSPREG00000007815	tarbp2	97	71.512	ENSXETG00000012644	tarbp2	97	71.221	Xenopus_tropicalis
ENSPREG00000007815	tarbp2	100	98.261	ENSXMAG00000017836	tarbp2	100	98.261	Xiphophorus_maculatus