EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000007817 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 433 bases
Position: chrLG7:21011613-21012045
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011477	SM-ATX	PF14438.6	3.4e-08	1	1
ENSPREP00000011477	LSM14	PF12701.7	1.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011604	-	264	-	ENSPREP00000011477	87 (aa)	-	-

Gene Model

Click here to download ENSPREG00000007817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000007817	-	95	65.060	ENSPREG00000016484	-	54	65.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007817	-	93	77.778	ENSAPOG00000009997	-	75	77.778	Acanthochromis_polyacanthus
ENSPREG00000007817	-	93	87.654	ENSACIG00000003134	-	66	87.654	Amphilophus_citrinellus
ENSPREG00000007817	-	93	81.481	ENSAPEG00000013779	-	80	81.481	Amphiprion_percula
ENSPREG00000007817	-	98	85.227	ENSATEG00000015882	-	100	85.227	Anabas_testudineus
ENSPREG00000007817	-	95	65.060	ENSCVAG00000005570	-	86	65.060	Cyprinodon_variegatus
ENSPREG00000007817	-	93	91.358	ENSCVAG00000012411	-	84	91.358	Cyprinodon_variegatus
ENSPREG00000007817	-	93	95.062	ENSGAFG00000013718	-	84	95.062	Gambusia_affinis
ENSPREG00000007817	-	91	82.278	ENSHBUG00000012323	-	75	82.278	Haplochromis_burtoni
ENSPREG00000007817	-	94	65.854	ENSHBUG00000011864	-	62	65.854	Haplochromis_burtoni
ENSPREG00000007817	-	90	62.821	ENSHCOG00000004862	-	72	62.821	Hippocampus_comes
ENSPREG00000007817	-	93	90.123	ENSKMAG00000012850	-	84	90.123	Kryptolebias_marmoratus
ENSPREG00000007817	-	93	88.889	ENSKMAG00000016674	-	74	88.889	Kryptolebias_marmoratus
ENSPREG00000007817	-	93	87.654	ENSLBEG00000007971	-	78	87.654	Labrus_bergylta
ENSPREG00000007817	-	95	66.265	ENSLBEG00000016427	lsm14b	58	66.265	Labrus_bergylta
ENSPREG00000007817	-	92	72.500	ENSNGAG00000016305	-	64	72.500	Nannospalax_galili
ENSPREG00000007817	-	94	65.854	ENSNBRG00000022606	-	62	65.854	Neolamprologus_brichardi
ENSPREG00000007817	-	91	81.013	ENSNBRG00000022370	-	75	81.013	Neolamprologus_brichardi
ENSPREG00000007817	-	91	87.342	ENSORLG00020018184	-	81	87.342	Oryzias_latipes_hni
ENSPREG00000007817	-	91	87.342	ENSOMEG00000007241	-	95	87.342	Oryzias_melastigma
ENSPREG00000007817	-	93	77.778	ENSPKIG00000003275	lsm14b	75	77.778	Paramormyrops_kingsleyae
ENSPREG00000007817	-	93	66.667	ENSPMGG00000014569	lsm14b	51	66.667	Periophthalmus_magnuspinnatus
ENSPREG00000007817	-	93	77.778	ENSPMGG00000004595	-	82	77.778	Periophthalmus_magnuspinnatus
ENSPREG00000007817	-	91	82.278	ENSPNYG00000021706	-	75	82.278	Pundamilia_nyererei
ENSPREG00000007817	-	94	65.854	ENSPNYG00000019601	-	62	65.854	Pundamilia_nyererei
ENSPREG00000007817	-	93	88.889	ENSSLDG00000012686	-	88	88.889	Seriola_lalandi_dorsalis
ENSPREG00000007817	-	93	88.889	ENSSLDG00000011341	-	88	88.889	Seriola_lalandi_dorsalis
ENSPREG00000007817	-	94	65.854	ENSSLDG00000011706	-	89	65.854	Seriola_lalandi_dorsalis
ENSPREG00000007817	-	91	84.810	ENSSPAG00000018837	-	78	84.810	Stegastes_partitus
ENSPREG00000007817	-	100	89.011	ENSXCOG00000011423	-	100	89.011	Xiphophorus_couchianus
ENSPREG00000007817	-	90	67.949	ENSXCOG00000017365	-	79	67.949	Xiphophorus_couchianus
ENSPREG00000007817	-	100	87.912	ENSXMAG00000015481	-	100	87.912	Xiphophorus_maculatus