EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000007928 (Gene tree)
Gene ID
103480306
Gene Symbol
-
Alias
-
Full Name
heterogeneous nuclear ribonucleoprotein C-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
9612 bases
Position
chrLG18:6824659-6834270
Accession
103480306
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000011672RRM_1PF00076.221e-1311
ENSPREP00000011655RRM_1PF00076.221.3e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000011785-1092XM_017310517ENSPREP00000011655363 (aa)XP_017166006-
ENSPRET00000011802-987XM_008435190ENSPREP00000011672306 (aa)XP_008433412UPI0004A47309
Gene Model
Click here to download ENSPREG00000007928's gene model file
Pathways
Pathway IDPathway NameSource
pret03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007928's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000007928-8451.439ENSPREG00000001956ralyl7558.447
ENSPREG00000007928-8275.984ENSPREG00000001852-8477.165
ENSPREG00000007928-9447.195ENSPREG00000013805-9146.801
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000007928-7354.867ENSG00000184672RALYL9179.221Homo_sapiens
ENSPREG00000007928-9385.915ENSAPOG00000006963hnrnpc9286.268Acanthochromis_polyacanthus
ENSPREG00000007928-8989.051ENSACIG00000000270-9089.259Amphilophus_citrinellus
ENSPREG00000007928-9665.763ENSACIG00000016568-8278.346Amphilophus_citrinellus
ENSPREG00000007928-8275.591ENSAOCG00000021616-7877.559Amphiprion_ocellaris
ENSPREG00000007928-9385.563ENSAOCG00000003896-9285.915Amphiprion_ocellaris
ENSPREG00000007928-9385.563ENSAPEG00000001489-9285.915Amphiprion_percula
ENSPREG00000007928-8376.357ENSAPEG00000019962-8177.953Amphiprion_percula
ENSPREG00000007928-9385.915ENSATEG00000011734-9285.915Anabas_testudineus
ENSPREG00000007928-8676.779ENSATEG00000018006-7683.732Anabas_testudineus
ENSPREG00000007928-7350.209ENSAPLG00000015574RALYL7554.222Anas_platyrhynchos
ENSPREG00000007928-7349.372ENSACAG00000028464RALYL7451.965Anolis_carolinensis
ENSPREG00000007928-7355.310ENSANAG00000023383RALYL7358.571Aotus_nancymaae
ENSPREG00000007928-8774.908ENSACLG00000005707-8678.740Astatotilapia_calliptera
ENSPREG00000007928-9388.380ENSACLG00000000995-9288.380Astatotilapia_calliptera
ENSPREG00000007928-9388.380ENSACLG00000013636-9088.380Astatotilapia_calliptera
ENSPREG00000007928-6874.408ENSAMXG00000042946hnrnpc9573.404Astyanax_mexicanus
ENSPREG00000007928-8176.613ENSAMXG00000034915zgc:557338674.000Astyanax_mexicanus
ENSPREG00000007928-7354.867ENSCJAG00000000402RALYL7358.095Callithrix_jacchus
ENSPREG00000007928-9146.780ENSCPOG00000012314RALYL7455.856Cavia_porcellus
ENSPREG00000007928-9148.936ENSCCAG00000025003RALYL7579.221Cebus_capucinus
ENSPREG00000007928-7354.867ENSCATG00000042145RALYL7359.242Cercocebus_atys
ENSPREG00000007928-7351.681ENSCLAG00000005228RALYL7455.856Chinchilla_lanigera
ENSPREG00000007928-6951.542ENSCHOG00000013228RALYL7451.111Choloepus_hoffmanni
ENSPREG00000007928-7354.867ENSCANG00000039144RALYL7359.242Colobus_angolensis_palliatus
ENSPREG00000007928-8746.290ENSCGRG00001009241Ralyl7455.157Cricetulus_griseus_chok1gshd
ENSPREG00000007928-7177.064ENSCSEG00000019769-7077.885Cynoglossus_semilaevis
ENSPREG00000007928-7875.417ENSCSEG00000021349-7277.826Cynoglossus_semilaevis
ENSPREG00000007928-8278.516ENSCVAG00000016981-8771.080Cyprinodon_variegatus
ENSPREG00000007928-9677.288ENSCVAG00000002797-9876.976Cyprinodon_variegatus
ENSPREG00000007928-9175.269ENSDARG00000103845zgc:557339076.800Danio_rerio
ENSPREG00000007928-7973.251ENSDARG00000053810hnrnpc7873.123Danio_rerio
ENSPREG00000007928-7351.046ENSDORG00000003721Ralyl7455.605Dipodomys_ordii
ENSPREG00000007928-5355.429ENSETEG00000014028RALYL8658.140Echinops_telfairi
ENSPREG00000007928-7841.254ENSEBUG00000012363hnrnpc6448.624Eptatretus_burgeri
ENSPREG00000007928-8842.701ENSEBUG00000006049RALYL7346.948Eptatretus_burgeri
ENSPREG00000007928-7351.464ENSEEUG00000007202RALYL7655.111Erinaceus_europaeus
ENSPREG00000007928-8278.195ENSELUG00000007714-8778.764Esox_lucius
ENSPREG00000007928-8376.953ENSELUG00000004132-8777.220Esox_lucius
ENSPREG00000007928-6958.065ENSFALG00000008647RALYL9658.140Ficedula_albicollis
ENSPREG00000007928-10089.869ENSFHEG00000003605-10089.542Fundulus_heteroclitus
ENSPREG00000007928-8372.894ENSFHEG00000007278-8469.534Fundulus_heteroclitus
ENSPREG00000007928-7353.509ENSGALG00000036938RALYL7454.222Gallus_gallus
ENSPREG00000007928-10094.118ENSGAFG00000020486-10094.118Gambusia_affinis
ENSPREG00000007928-8376.744ENSGAFG00000020992-8277.165Gambusia_affinis
ENSPREG00000007928-7167.713ENSGACG00000018932-8369.231Gasterosteus_aculeatus
ENSPREG00000007928-8775.277ENSGACG00000017772-9676.587Gasterosteus_aculeatus
ENSPREG00000007928-7354.867ENSGGOG00000000841RALYL7359.242Gorilla_gorilla
ENSPREG00000007928-8775.277ENSHBUG00000010527-7978.516Haplochromis_burtoni
ENSPREG00000007928-9388.732ENSHBUG00000018342-9288.732Haplochromis_burtoni
ENSPREG00000007928-7351.261ENSHGLG00000004866RALYL7455.405Heterocephalus_glaber_female
ENSPREG00000007928-7351.261ENSHGLG00100017480RALYL7455.405Heterocephalus_glaber_male
ENSPREG00000007928-8473.529ENSHCOG00000012333hnrnpc8673.684Hippocampus_comes
ENSPREG00000007928-8476.448ENSIPUG00000011271hnrnpc9576.712Ictalurus_punctatus
ENSPREG00000007928-8176.210ENSIPUG00000008666zgc:557339178.846Ictalurus_punctatus
ENSPREG00000007928-7350.628ENSSTOG00000012583RALYL7555.157Ictidomys_tridecemlineatus
ENSPREG00000007928-9287.589ENSKMAG00000011170-9187.324Kryptolebias_marmoratus
ENSPREG00000007928-8275.984ENSKMAG00000018265-7876.772Kryptolebias_marmoratus
ENSPREG00000007928-8976.241ENSLBEG00000024418-8575.285Labrus_bergylta
ENSPREG00000007928-8575.665ENSLBEG00000006193-7975.984Labrus_bergylta
ENSPREG00000007928-8880.741ENSLBEG00000006979-8680.876Labrus_bergylta
ENSPREG00000007928-8667.399ENSLOCG00000002560hnrnpc8868.217Lepisosteus_oculatus
ENSPREG00000007928-7354.867ENSMNEG00000033288RALYL7359.242Macaca_nemestrina
ENSPREG00000007928-7354.867ENSMLEG00000038284RALYL7359.242Mandrillus_leucophaeus
ENSPREG00000007928-8676.030ENSMAMG00000008033-8478.862Mastacembelus_armatus
ENSPREG00000007928-9384.211ENSMAMG00000012236-9285.614Mastacembelus_armatus
ENSPREG00000007928-8774.908ENSMZEG00005024249-8078.740Maylandia_zebra
ENSPREG00000007928-9388.380ENSMZEG00005020460-9288.380Maylandia_zebra
ENSPREG00000007928-8746.290ENSMAUG00000015149Ralyl7455.157Mesocricetus_auratus
ENSPREG00000007928-7354.626ENSMICG00000005558RALYL7879.221Microcebus_murinus
ENSPREG00000007928-8745.936ENSMOCG00000017371Ralyl7455.157Microtus_ochrogaster
ENSPREG00000007928-8177.600ENSMMOG00000019520-8477.778Mola_mola
ENSPREG00000007928-8384.706ENSMMOG00000021465-8884.462Mola_mola
ENSPREG00000007928-8374.902ENSMALG00000007520-9076.952Monopterus_albus
ENSPREG00000007928-8679.545ENSMALG00000014623-7979.447Monopterus_albus
ENSPREG00000007928-8745.936ENSMUSG00000039717Ralyl9177.922Mus_musculus
ENSPREG00000007928-7351.883ENSMPUG00000010724RALYL7454.260Mustela_putorius_furo
ENSPREG00000007928-8746.643ENSNGAG00000013375Ralyl7455.157Nannospalax_galili
ENSPREG00000007928-8989.011ENSNBRG00000004912-8988.848Neolamprologus_brichardi
ENSPREG00000007928-8775.277ENSNBRG00000015676-7978.516Neolamprologus_brichardi
ENSPREG00000007928-7354.867ENSNLEG00000002702RALYL6959.242Nomascus_leucogenys
ENSPREG00000007928-5849.485ENSOPRG00000013650-9848.969Ochotona_princeps
ENSPREG00000007928-7352.101ENSODEG00000001012RALYL7455.856Octodon_degus
ENSPREG00000007928-8774.908ENSONIG00000018350-7978.125Oreochromis_niloticus
ENSPREG00000007928-9283.972ENSONIG00000007859-9485.036Oreochromis_niloticus
ENSPREG00000007928-8275.573ENSORLG00000003144-7876.718Oryzias_latipes
ENSPREG00000007928-9378.246ENSORLG00000009999-9378.596Oryzias_latipes
ENSPREG00000007928-9377.895ENSORLG00020018228hnrnpc9378.246Oryzias_latipes_hni
ENSPREG00000007928-9378.246ENSORLG00015019755-9378.596Oryzias_latipes_hsok
ENSPREG00000007928-9568.438ENSORLG00015009460-7876.718Oryzias_latipes_hsok
ENSPREG00000007928-8278.431ENSOMEG00000022665-7979.216Oryzias_melastigma
ENSPREG00000007928-8778.731ENSOMEG00000020488-8780.000Oryzias_melastigma
ENSPREG00000007928-7354.867ENSPPAG00000038705RALYL7359.242Pan_paniscus
ENSPREG00000007928-7354.386ENSPPRG00000018612RALYL7358.216Panthera_pardus
ENSPREG00000007928-7354.386ENSPTIG00000020331RALYL7358.216Panthera_tigris_altaica
ENSPREG00000007928-7354.867ENSPTRG00000020381RALYL7359.242Pan_troglodytes
ENSPREG00000007928-7354.867ENSPANG00000029305RALYL7359.242Papio_anubis
ENSPREG00000007928-9174.216ENSPKIG00000008592-8775.451Paramormyrops_kingsleyae
ENSPREG00000007928-9174.386ENSPKIG00000022837-8675.725Paramormyrops_kingsleyae
ENSPREG00000007928-7350.209ENSPSIG00000011135RALYL7354.709Pelodiscus_sinensis
ENSPREG00000007928-6777.184ENSPMGG00000017774-8667.476Periophthalmus_magnuspinnatus
ENSPREG00000007928-7184.722ENSPMGG00000013144-7884.135Periophthalmus_magnuspinnatus
ENSPREG00000007928-8746.290ENSPEMG00000016447Ralyl7455.157Peromyscus_maniculatus_bairdii
ENSPREG00000007928-6953.070ENSPMAG00000002407RALYL9653.097Petromyzon_marinus
ENSPREG00000007928-9568.831ENSPFOG00000002643-8076.357Poecilia_formosa
ENSPREG00000007928-10094.463ENSPFOG00000001583-10094.463Poecilia_formosa
ENSPREG00000007928-10094.771ENSPLAG00000015305-10094.771Poecilia_latipinna
ENSPREG00000007928-8276.772ENSPLAG00000000061-7877.559Poecilia_latipinna
ENSPREG00000007928-10095.098ENSPMEG00000004802-10095.098Poecilia_mexicana
ENSPREG00000007928-8276.378ENSPMEG00000016524-7877.165Poecilia_mexicana
ENSPREG00000007928-7346.637ENSPPYG00000018710-6745.933Pongo_abelii
ENSPREG00000007928-7351.261ENSPVAG00000010821RALYL7852.542Pteropus_vampyrus
ENSPREG00000007928-9187.004ENSPNYG00000020293-9287.361Pundamilia_nyererei
ENSPREG00000007928-8775.277ENSPNYG00000003747-8578.516Pundamilia_nyererei
ENSPREG00000007928-8176.210ENSPNAG00000015686hnrnpc8475.397Pygocentrus_nattereri
ENSPREG00000007928-8175.984ENSPNAG00000019200zgc:557337977.778Pygocentrus_nattereri
ENSPREG00000007928-7354.867ENSRROG00000023925RALYL8077.215Rhinopithecus_roxellana
ENSPREG00000007928-8470.992ENSSFOG00015012015-8082.297Scleropages_formosus
ENSPREG00000007928-8374.427ENSSFOG00015012924-7892.208Scleropages_formosus
ENSPREG00000007928-9381.119ENSSMAG00000013592-9180.420Scophthalmus_maximus
ENSPREG00000007928-8474.046ENSSMAG00000011147-7781.905Scophthalmus_maximus
ENSPREG00000007928-9386.620ENSSDUG00000001723-9286.620Seriola_dumerili
ENSPREG00000007928-8677.736ENSSDUG00000006730-8077.559Seriola_dumerili
ENSPREG00000007928-8677.736ENSSLDG00000007474-8779.216Seriola_lalandi_dorsalis
ENSPREG00000007928-9186.380ENSSLDG00000007454-9286.170Seriola_lalandi_dorsalis
ENSPREG00000007928-9286.121ENSSPAG00000023204-9286.620Stegastes_partitus
ENSPREG00000007928-8675.849ENSSPAG00000013996-7976.772Stegastes_partitus
ENSPREG00000007928-7151.282ENSTGUG00000011689RALYL7654.222Taeniopygia_guttata
ENSPREG00000007928-8679.771ENSTRUG00000020158-8979.630Takifugu_rubripes
ENSPREG00000007928-8376.245ENSTNIG00000007427-8376.265Tetraodon_nigroviridis
ENSPREG00000007928-8373.438ENSTNIG00000000334-9374.409Tetraodon_nigroviridis
ENSPREG00000007928-7047.436ENSTBEG00000005551RALYL8648.430Tupaia_belangeri
ENSPREG00000007928-7350.427ENSTTRG00000015762RALYL7354.128Tursiops_truncatus
ENSPREG00000007928-7349.780ENSVPAG00000008501RALYL7353.774Vicugna_pacos
ENSPREG00000007928-8886.667ENSXCOG00000006552-8187.649Xiphophorus_couchianus
ENSPREG00000007928-5183.537ENSXCOG00000019434-9170.968Xiphophorus_couchianus
ENSPREG00000007928-8275.984ENSXMAG00000022849-8276.772Xiphophorus_maculatus
ENSPREG00000007928-10093.791ENSXMAG00000009333-10093.791Xiphophorus_maculatus

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