EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000007940 (Gene tree)
Gene ID: 103478079
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 12287 bases
Position: chrLG16:11154989-11167275
Accession: 103478079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011711	Fox-1_C	PF12414.8	4.9e-18	1	1
ENSPREP00000011711	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011841	-	1095	XM_008431572	ENSPREP00000011711	364 (aa)	XP_008429794	-

Gene Model

Click here to download ENSPREG00000007940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000007940	rbfox1l	97	51.743	ENSPREG00000012886	rbfox3b	82	57.426
ENSPREG00000007940	rbfox1l	55	57.983	ENSPREG00000012955	rbfox2	100	57.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007940	rbfox1l	97	84.906	ENSAPOG00000016304	rbfox1l	98	85.714	Acanthochromis_polyacanthus
ENSPREG00000007940	rbfox1l	100	83.152	ENSACIG00000006441	rbfox1l	100	82.609	Amphilophus_citrinellus
ENSPREG00000007940	rbfox1l	87	90.312	ENSAOCG00000020938	rbfox1l	99	90.625	Amphiprion_ocellaris
ENSPREG00000007940	rbfox1l	100	90.164	ENSAPEG00000008232	rbfox1l	100	90.437	Amphiprion_percula
ENSPREG00000007940	rbfox1l	100	86.280	ENSATEG00000022649	rbfox1l	100	86.280	Anabas_testudineus
ENSPREG00000007940	rbfox1l	63	68.526	ENSACAG00000011931	-	91	68.651	Anolis_carolinensis
ENSPREG00000007940	rbfox1l	100	84.595	ENSACLG00000021394	rbfox1l	100	84.595	Astatotilapia_calliptera
ENSPREG00000007940	rbfox1l	100	80.052	ENSAMXG00000010470	rbfox1l	100	81.088	Astyanax_mexicanus
ENSPREG00000007940	rbfox1l	64	65.600	ENSCPBG00000010944	-	100	56.701	Chrysemys_picta_bellii
ENSPREG00000007940	rbfox1l	100	81.510	ENSCSEG00000018898	rbfox1l	100	81.250	Cynoglossus_semilaevis
ENSPREG00000007940	rbfox1l	100	90.078	ENSCVAG00000007986	rbfox1l	100	90.078	Cyprinodon_variegatus
ENSPREG00000007940	rbfox1l	100	76.943	ENSDARG00000021184	rbfox1l	100	78.756	Danio_rerio
ENSPREG00000007940	rbfox1l	100	78.626	ENSELUG00000015077	rbfox1l	100	78.880	Esox_lucius
ENSPREG00000007940	rbfox1l	100	75.137	ENSFHEG00000016557	rbfox1l	100	74.863	Fundulus_heteroclitus
ENSPREG00000007940	rbfox1l	100	78.329	ENSGMOG00000005040	rbfox1l	100	78.329	Gadus_morhua
ENSPREG00000007940	rbfox1l	92	92.898	ENSGAFG00000013211	rbfox1l	97	92.898	Gambusia_affinis
ENSPREG00000007940	rbfox1l	100	84.856	ENSGACG00000010757	rbfox1l	100	84.856	Gasterosteus_aculeatus
ENSPREG00000007940	rbfox1l	66	64.341	ENSGAGG00000012440	-	90	66.667	Gopherus_agassizii
ENSPREG00000007940	rbfox1l	100	84.595	ENSHBUG00000013406	rbfox1l	100	84.595	Haplochromis_burtoni
ENSPREG00000007940	rbfox1l	100	80.208	ENSHCOG00000020771	rbfox1l	100	81.250	Hippocampus_comes
ENSPREG00000007940	rbfox1l	99	72.513	ENSIPUG00000000065	rbfox1l	99	75.978	Ictalurus_punctatus
ENSPREG00000007940	rbfox1l	100	85.455	ENSKMAG00000005146	rbfox1l	100	85.974	Kryptolebias_marmoratus
ENSPREG00000007940	rbfox1l	100	85.640	ENSLBEG00000017089	rbfox1l	100	86.162	Labrus_bergylta
ENSPREG00000007940	rbfox1l	100	85.640	ENSMAMG00000019480	rbfox1l	100	86.423	Mastacembelus_armatus
ENSPREG00000007940	rbfox1l	100	84.595	ENSMZEG00005016374	rbfox1l	100	84.595	Maylandia_zebra
ENSPREG00000007940	rbfox1l	100	83.290	ENSMMOG00000016530	rbfox1l	100	83.290	Mola_mola
ENSPREG00000007940	rbfox1l	100	81.462	ENSMALG00000009384	rbfox1l	100	81.723	Monopterus_albus
ENSPREG00000007940	rbfox1l	100	83.551	ENSNBRG00000003346	rbfox1l	100	83.551	Neolamprologus_brichardi
ENSPREG00000007940	rbfox1l	100	85.117	ENSONIG00000012754	rbfox1l	100	85.117	Oreochromis_niloticus
ENSPREG00000007940	rbfox1l	100	85.640	ENSORLG00000011269	rbfox1l	100	85.901	Oryzias_latipes
ENSPREG00000007940	rbfox1l	100	85.901	ENSORLG00020000162	rbfox1l	100	86.423	Oryzias_latipes_hni
ENSPREG00000007940	rbfox1l	100	85.901	ENSORLG00015013464	rbfox1l	100	86.423	Oryzias_latipes_hsok
ENSPREG00000007940	rbfox1l	100	86.162	ENSOMEG00000010584	rbfox1l	100	86.423	Oryzias_melastigma
ENSPREG00000007940	rbfox1l	100	81.250	ENSPKIG00000012029	rbfox1l	100	82.031	Paramormyrops_kingsleyae
ENSPREG00000007940	rbfox1l	100	76.042	ENSPMGG00000012082	rbfox1l	100	76.302	Periophthalmus_magnuspinnatus
ENSPREG00000007940	rbfox1l	100	93.701	ENSPFOG00000009338	rbfox1l	100	93.701	Poecilia_formosa
ENSPREG00000007940	rbfox1l	85	86.943	ENSPLAG00000012816	rbfox1l	99	86.943	Poecilia_latipinna
ENSPREG00000007940	rbfox1l	100	98.626	ENSPMEG00000017597	rbfox1l	100	98.626	Poecilia_mexicana
ENSPREG00000007940	rbfox1l	100	84.856	ENSPNYG00000002098	rbfox1l	100	84.856	Pundamilia_nyererei
ENSPREG00000007940	rbfox1l	100	77.003	ENSPNAG00000001620	rbfox1l	100	80.103	Pygocentrus_nattereri
ENSPREG00000007940	rbfox1l	100	76.623	ENSSFOG00015000675	rbfox1l	100	78.961	Scleropages_formosus
ENSPREG00000007940	rbfox1l	100	82.723	ENSSMAG00000013090	rbfox1l	100	82.984	Scophthalmus_maximus
ENSPREG00000007940	rbfox1l	100	83.805	ENSSDUG00000008705	rbfox1l	100	84.576	Seriola_dumerili
ENSPREG00000007940	rbfox1l	100	84.021	ENSSLDG00000022256	rbfox1l	100	85.052	Seriola_lalandi_dorsalis
ENSPREG00000007940	rbfox1l	100	89.891	ENSSPAG00000016620	rbfox1l	100	90.164	Stegastes_partitus
ENSPREG00000007940	rbfox1l	96	79.404	ENSTRUG00000015905	rbfox1l	100	80.000	Takifugu_rubripes
ENSPREG00000007940	rbfox1l	63	76.493	ENSTNIG00000008088	rbfox1l	100	76.580	Tetraodon_nigroviridis
ENSPREG00000007940	rbfox1l	100	94.226	ENSXMAG00000023471	rbfox1l	100	94.226	Xiphophorus_maculatus