EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000007980 (Gene tree)
Gene ID: 103459529
Gene Symbol: trmu
Alias: -
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3351 bases
Position: chrLG23:8444207-8447557
Accession: 103459529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011756	tRNA_Me_trans	PF03054.16	2.7e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011885	-	1251	XM_008401164	ENSPREP00000011756	416 (aa)	XP_008399386	UPI0004A2A7E5

Gene Model

Click here to download ENSPREG00000007980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007980	trmu	99	70.433	ENSG00000100416	TRMU	96	76.730	Homo_sapiens
ENSPREG00000007980	trmu	99	87.740	ENSAPOG00000014458	trmu	99	87.740	Acanthochromis_polyacanthus
ENSPREG00000007980	trmu	98	72.414	ENSAMEG00000003319	TRMU	97	72.414	Ailuropoda_melanoleuca
ENSPREG00000007980	trmu	99	85.990	ENSACIG00000002101	trmu	99	85.990	Amphilophus_citrinellus
ENSPREG00000007980	trmu	99	88.675	ENSAOCG00000013155	trmu	99	88.675	Amphiprion_ocellaris
ENSPREG00000007980	trmu	99	88.434	ENSAPEG00000013350	trmu	99	88.434	Amphiprion_percula
ENSPREG00000007980	trmu	99	85.854	ENSATEG00000007814	trmu	99	85.854	Anabas_testudineus
ENSPREG00000007980	trmu	93	72.680	ENSAPLG00000016380	TRMU	99	72.680	Anas_platyrhynchos
ENSPREG00000007980	trmu	95	72.911	ENSACAG00000007720	TRMU	95	72.911	Anolis_carolinensis
ENSPREG00000007980	trmu	99	70.803	ENSANAG00000038053	TRMU	97	70.803	Aotus_nancymaae
ENSPREG00000007980	trmu	99	87.681	ENSACLG00000005395	trmu	98	88.889	Astatotilapia_calliptera
ENSPREG00000007980	trmu	99	78.780	ENSAMXG00000005282	trmu	99	78.780	Astyanax_mexicanus
ENSPREG00000007980	trmu	99	70.913	ENSBTAG00000005595	TRMU	99	70.913	Bos_taurus
ENSPREG00000007980	trmu	91	40.979	WBGene00007114	mttu-1	98	40.979	Caenorhabditis_elegans
ENSPREG00000007980	trmu	99	68.916	ENSCJAG00000000198	TRMU	99	68.916	Callithrix_jacchus
ENSPREG00000007980	trmu	99	71.776	ENSCAFG00000000779	TRMU	98	71.154	Canis_familiaris
ENSPREG00000007980	trmu	99	71.776	ENSCAFG00020009184	TRMU	98	71.154	Canis_lupus_dingo
ENSPREG00000007980	trmu	100	70.504	ENSCHIG00000017074	TRMU	99	70.673	Capra_hircus
ENSPREG00000007980	trmu	96	72.682	ENSTSYG00000003853	TRMU	95	72.682	Carlito_syrichta
ENSPREG00000007980	trmu	96	66.587	ENSCAPG00000013034	TRMU	98	66.587	Cavia_aperea
ENSPREG00000007980	trmu	99	70.602	ENSCPOG00000020780	TRMU	99	70.602	Cavia_porcellus
ENSPREG00000007980	trmu	99	69.398	ENSCCAG00000021641	TRMU	99	69.398	Cebus_capucinus
ENSPREG00000007980	trmu	96	71.930	ENSCATG00000032800	TRMU	95	71.930	Cercocebus_atys
ENSPREG00000007980	trmu	100	69.712	ENSCLAG00000017269	TRMU	99	69.712	Chinchilla_lanigera
ENSPREG00000007980	trmu	99	70.192	ENSCSAG00000005279	TRMU	99	70.192	Chlorocebus_sabaeus
ENSPREG00000007980	trmu	92	71.875	ENSCPBG00000011621	TRMU	96	71.875	Chrysemys_picta_bellii
ENSPREG00000007980	trmu	94	47.462	ENSCING00000019371	-	96	47.462	Ciona_intestinalis
ENSPREG00000007980	trmu	96	71.178	ENSCANG00000041645	TRMU	95	71.178	Colobus_angolensis_palliatus
ENSPREG00000007980	trmu	99	70.316	ENSCGRG00001001739	Trmu	98	70.316	Cricetulus_griseus_chok1gshd
ENSPREG00000007980	trmu	99	65.207	ENSCGRG00000002781	Trmu	98	65.207	Cricetulus_griseus_crigri
ENSPREG00000007980	trmu	100	80.288	ENSCSEG00000012382	trmu	100	80.288	Cynoglossus_semilaevis
ENSPREG00000007980	trmu	99	92.048	ENSCVAG00000001366	trmu	99	92.048	Cyprinodon_variegatus
ENSPREG00000007980	trmu	99	75.362	ENSDARG00000043734	trmu	99	75.362	Danio_rerio
ENSPREG00000007980	trmu	62	58.301	ENSDNOG00000047245	-	95	56.827	Dasypus_novemcinctus
ENSPREG00000007980	trmu	96	72.180	ENSDORG00000007455	Trmu	97	72.180	Dipodomys_ordii
ENSPREG00000007980	trmu	93	43.264	FBgn0040337	CG3021	95	43.264	Drosophila_melanogaster
ENSPREG00000007980	trmu	94	56.997	ENSEBUG00000007454	trmu	100	55.331	Eptatretus_burgeri
ENSPREG00000007980	trmu	96	72.932	ENSEASG00005021725	TRMU	99	71.154	Equus_asinus_asinus
ENSPREG00000007980	trmu	96	72.932	ENSECAG00000000467	TRMU	99	71.154	Equus_caballus
ENSPREG00000007980	trmu	71	52.000	ENSEEUG00000000074	-	72	52.000	Erinaceus_europaeus
ENSPREG00000007980	trmu	99	79.327	ENSELUG00000009464	trmu	99	81.522	Esox_lucius
ENSPREG00000007980	trmu	96	72.932	ENSFCAG00000006533	TRMU	99	70.913	Felis_catus
ENSPREG00000007980	trmu	93	71.212	ENSFALG00000010035	TRMU	99	71.212	Ficedula_albicollis
ENSPREG00000007980	trmu	93	68.557	ENSFDAG00000017472	TRMU	99	68.557	Fukomys_damarensis
ENSPREG00000007980	trmu	99	91.084	ENSFHEG00000003162	trmu	99	91.084	Fundulus_heteroclitus
ENSPREG00000007980	trmu	97	71.744	ENSGMOG00000001323	trmu	100	71.744	Gadus_morhua
ENSPREG00000007980	trmu	99	72.315	ENSGALG00000031922	TRMU	99	72.315	Gallus_gallus
ENSPREG00000007980	trmu	98	96.088	ENSGAFG00000013331	trmu	98	96.088	Gambusia_affinis
ENSPREG00000007980	trmu	99	82.701	ENSGACG00000019024	trmu	99	82.701	Gasterosteus_aculeatus
ENSPREG00000007980	trmu	99	70.433	ENSGGOG00000000203	TRMU	99	70.433	Gorilla_gorilla
ENSPREG00000007980	trmu	99	87.198	ENSHBUG00000023421	trmu	98	88.347	Haplochromis_burtoni
ENSPREG00000007980	trmu	99	69.231	ENSHGLG00000009278	TRMU	99	69.231	Heterocephalus_glaber_female
ENSPREG00000007980	trmu	99	69.231	ENSHGLG00100018863	TRMU	99	69.231	Heterocephalus_glaber_male
ENSPREG00000007980	trmu	99	84.819	ENSHCOG00000013459	trmu	99	84.819	Hippocampus_comes
ENSPREG00000007980	trmu	96	80.952	ENSIPUG00000009785	trmu	98	80.952	Ictalurus_punctatus
ENSPREG00000007980	trmu	99	70.433	ENSSTOG00000010993	TRMU	99	70.433	Ictidomys_tridecemlineatus
ENSPREG00000007980	trmu	97	70.471	ENSJJAG00000000667	Trmu	97	70.471	Jaculus_jaculus
ENSPREG00000007980	trmu	99	84.819	ENSKMAG00000008516	trmu	99	84.819	Kryptolebias_marmoratus
ENSPREG00000007980	trmu	99	83.855	ENSLBEG00000018831	trmu	99	83.855	Labrus_bergylta
ENSPREG00000007980	trmu	98	73.430	ENSLACG00000013713	TRMU	99	73.430	Latimeria_chalumnae
ENSPREG00000007980	trmu	99	78.125	ENSLOCG00000016066	trmu	99	78.125	Lepisosteus_oculatus
ENSPREG00000007980	trmu	99	61.814	ENSLAFG00000005129	TRMU	99	61.814	Loxodonta_africana
ENSPREG00000007980	trmu	99	70.433	ENSMFAG00000039767	TRMU	99	70.433	Macaca_fascicularis
ENSPREG00000007980	trmu	99	70.433	ENSMMUG00000000807	TRMU	99	70.433	Macaca_mulatta
ENSPREG00000007980	trmu	99	70.433	ENSMNEG00000028164	TRMU	99	70.433	Macaca_nemestrina
ENSPREG00000007980	trmu	96	71.930	ENSMLEG00000033884	TRMU	95	71.930	Mandrillus_leucophaeus
ENSPREG00000007980	trmu	99	84.058	ENSMAMG00000004717	trmu	99	84.058	Mastacembelus_armatus
ENSPREG00000007980	trmu	99	87.681	ENSMZEG00005015797	trmu	99	87.681	Maylandia_zebra
ENSPREG00000007980	trmu	80	70.468	ENSMGAG00000007550	TRMU	99	70.468	Meleagris_gallopavo
ENSPREG00000007980	trmu	99	70.073	ENSMAUG00000022282	Trmu	99	70.073	Mesocricetus_auratus
ENSPREG00000007980	trmu	96	72.180	ENSMICG00000029046	TRMU	97	72.180	Microcebus_murinus
ENSPREG00000007980	trmu	96	70.927	ENSMOCG00000014641	Trmu	96	70.927	Microtus_ochrogaster
ENSPREG00000007980	trmu	99	84.019	ENSMMOG00000007229	trmu	99	84.019	Mola_mola
ENSPREG00000007980	trmu	95	70.101	ENSMODG00000007433	TRMU	93	70.101	Monodelphis_domestica
ENSPREG00000007980	trmu	99	83.614	ENSMALG00000007721	trmu	99	83.614	Monopterus_albus
ENSPREG00000007980	trmu	98	69.682	MGP_CAROLIEiJ_G0020134	Trmu	98	69.682	Mus_caroli
ENSPREG00000007980	trmu	99	69.586	ENSMUSG00000022386	Trmu	99	69.586	Mus_musculus
ENSPREG00000007980	trmu	99	69.343	MGP_PahariEiJ_G0020139	Trmu	99	69.343	Mus_pahari
ENSPREG00000007980	trmu	99	69.586	MGP_SPRETEiJ_G0021031	Trmu	99	69.586	Mus_spretus
ENSPREG00000007980	trmu	99	70.673	ENSMPUG00000002523	TRMU	99	70.673	Mustela_putorius_furo
ENSPREG00000007980	trmu	99	70.531	ENSNGAG00000005132	Trmu	99	70.531	Nannospalax_galili
ENSPREG00000007980	trmu	99	87.681	ENSNBRG00000022690	trmu	99	89.250	Neolamprologus_brichardi
ENSPREG00000007980	trmu	99	70.192	ENSNLEG00000015773	TRMU	99	70.192	Nomascus_leucogenys
ENSPREG00000007980	trmu	79	60.550	ENSMEUG00000000216	TRMU	99	60.550	Notamacropus_eugenii
ENSPREG00000007980	trmu	100	70.192	ENSODEG00000014745	TRMU	100	70.335	Octodon_degus
ENSPREG00000007980	trmu	99	87.440	ENSONIG00000009821	trmu	99	87.440	Oreochromis_niloticus
ENSPREG00000007980	trmu	94	66.496	ENSOANG00000001891	TRMU	99	66.496	Ornithorhynchus_anatinus
ENSPREG00000007980	trmu	92	71.094	ENSOCUG00000003664	TRMU	96	69.900	Oryctolagus_cuniculus
ENSPREG00000007980	trmu	99	82.169	ENSORLG00000019015	trmu	99	82.169	Oryzias_latipes
ENSPREG00000007980	trmu	99	82.651	ENSORLG00020006830	trmu	99	82.651	Oryzias_latipes_hni
ENSPREG00000007980	trmu	99	82.651	ENSORLG00015003907	trmu	99	82.651	Oryzias_latipes_hsok
ENSPREG00000007980	trmu	60	81.855	ENSOMEG00000015541	trmu	90	81.855	Oryzias_melastigma
ENSPREG00000007980	trmu	99	70.024	ENSOGAG00000008096	TRMU	100	70.024	Otolemur_garnettii
ENSPREG00000007980	trmu	91	68.947	ENSOARG00000019475	TRMU	93	68.947	Ovis_aries
ENSPREG00000007980	trmu	99	70.433	ENSPPAG00000033944	TRMU	99	70.433	Pan_paniscus
ENSPREG00000007980	trmu	96	72.932	ENSPPRG00000004197	TRMU	98	71.154	Panthera_pardus
ENSPREG00000007980	trmu	67	72.924	ENSPTIG00000014122	TRMU	97	74.621	Panthera_tigris_altaica
ENSPREG00000007980	trmu	99	70.433	ENSPTRG00000014510	TRMU	99	70.433	Pan_troglodytes
ENSPREG00000007980	trmu	100	69.471	ENSPANG00000023074	TRMU	97	69.041	Papio_anubis
ENSPREG00000007980	trmu	99	77.184	ENSPKIG00000002849	trmu	99	77.184	Paramormyrops_kingsleyae
ENSPREG00000007980	trmu	88	73.626	ENSPSIG00000013020	TRMU	95	73.626	Pelodiscus_sinensis
ENSPREG00000007980	trmu	99	82.609	ENSPMGG00000004083	trmu	99	82.609	Periophthalmus_magnuspinnatus
ENSPREG00000007980	trmu	99	69.586	ENSPEMG00000014007	Trmu	99	69.586	Peromyscus_maniculatus_bairdii
ENSPREG00000007980	trmu	96	67.250	ENSPCIG00000009923	TRMU	95	67.079	Phascolarctos_cinereus
ENSPREG00000007980	trmu	98	94.828	ENSPFOG00000008197	trmu	91	94.828	Poecilia_formosa
ENSPREG00000007980	trmu	100	98.317	ENSPLAG00000008414	trmu	100	98.317	Poecilia_latipinna
ENSPREG00000007980	trmu	99	98.313	ENSPMEG00000004326	trmu	99	98.313	Poecilia_mexicana
ENSPREG00000007980	trmu	99	70.913	ENSPPYG00000011949	TRMU	99	70.913	Pongo_abelii
ENSPREG00000007980	trmu	93	63.144	ENSPCAG00000013462	TRMU	99	63.144	Procavia_capensis
ENSPREG00000007980	trmu	99	70.073	ENSPCOG00000016539	TRMU	99	70.073	Propithecus_coquereli
ENSPREG00000007980	trmu	96	66.416	ENSPVAG00000013202	TRMU	99	65.144	Pteropus_vampyrus
ENSPREG00000007980	trmu	99	87.198	ENSPNYG00000005629	trmu	99	87.198	Pundamilia_nyererei
ENSPREG00000007980	trmu	98	80.196	ENSPNAG00000006339	trmu	96	80.196	Pygocentrus_nattereri
ENSPREG00000007980	trmu	99	69.830	ENSRNOG00000016465	Trmu	99	69.830	Rattus_norvegicus
ENSPREG00000007980	trmu	99	69.231	ENSRBIG00000038973	TRMU	99	69.231	Rhinopithecus_bieti
ENSPREG00000007980	trmu	99	69.471	ENSRROG00000004267	TRMU	99	69.471	Rhinopithecus_roxellana
ENSPREG00000007980	trmu	91	34.165	YDL033C	SLM3	91	34.165	Saccharomyces_cerevisiae
ENSPREG00000007980	trmu	99	70.120	ENSSBOG00000030184	TRMU	99	70.120	Saimiri_boliviensis_boliviensis
ENSPREG00000007980	trmu	92	75.066	ENSSFOG00015020664	trmu	100	75.066	Scleropages_formosus
ENSPREG00000007980	trmu	99	84.988	ENSSMAG00000019450	trmu	99	84.988	Scophthalmus_maximus
ENSPREG00000007980	trmu	99	87.470	ENSSDUG00000011913	trmu	99	87.470	Seriola_dumerili
ENSPREG00000007980	trmu	99	87.229	ENSSLDG00000011684	trmu	99	87.229	Seriola_lalandi_dorsalis
ENSPREG00000007980	trmu	95	62.025	ENSSPUG00000017123	TRMU	93	62.025	Sphenodon_punctatus
ENSPREG00000007980	trmu	99	84.578	ENSSPAG00000021875	trmu	99	84.578	Stegastes_partitus
ENSPREG00000007980	trmu	97	71.464	ENSSSCG00000000007	TRMU	99	69.690	Sus_scrofa
ENSPREG00000007980	trmu	89	74.799	ENSTGUG00000003663	-	100	74.799	Taeniopygia_guttata
ENSPREG00000007980	trmu	99	83.535	ENSTRUG00000001231	trmu	100	83.535	Takifugu_rubripes
ENSPREG00000007980	trmu	99	83.453	ENSTNIG00000010484	trmu	98	83.453	Tetraodon_nigroviridis
ENSPREG00000007980	trmu	75	56.303	ENSTBEG00000011276	-	80	56.303	Tupaia_belangeri
ENSPREG00000007980	trmu	96	72.932	ENSTTRG00000004160	TRMU	95	72.932	Tursiops_truncatus
ENSPREG00000007980	trmu	70	74.658	ENSUAMG00000024825	TRMU	97	74.658	Ursus_americanus
ENSPREG00000007980	trmu	95	60.705	ENSUMAG00000019079	TRMU	97	74.319	Ursus_maritimus
ENSPREG00000007980	trmu	53	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSPREG00000007980	trmu	99	69.952	ENSVVUG00000024963	TRMU	99	69.952	Vulpes_vulpes
ENSPREG00000007980	trmu	99	72.705	ENSXETG00000023304	trmu	97	72.705	Xenopus_tropicalis
ENSPREG00000007980	trmu	100	94.988	ENSXCOG00000015105	trmu	100	94.988	Xiphophorus_couchianus
ENSPREG00000007980	trmu	100	97.115	ENSXMAG00000006697	trmu	100	97.115	Xiphophorus_maculatus