EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000007996 (Gene tree)
Gene ID: 103477264
Gene Symbol: tomm20a
Alias: -
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 44711 bases
Position: chrLG15:25488107-25532817
Accession: 103477264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011747	Tudor-knot	PF11717.8	2.5e-10	1	1
ENSPREP00000011771	Tudor-knot	PF11717.8	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011945	-	3817	XM_008430260	ENSPREP00000011815	1257 (aa)	XP_008428482	-
ENSPRET00000011877	-	4000	XM_008430256	ENSPREP00000011747	1318 (aa)	XP_008428478	UPI0004A2B08F
ENSPRET00000011901	-	3919	XM_008430259	ENSPREP00000011771	1291 (aa)	XP_008428481	UPI0004A34758

Gene Model

Click here to download ENSPREG00000007996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000007996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000007996	tomm20a	86	75.728	ENSG00000054267	ARID4B	85	75.243	Homo_sapiens
ENSPREG00000007996	tomm20a	100	85.301	ENSAPOG00000010823	tomm20a	100	83.854	Acanthochromis_polyacanthus
ENSPREG00000007996	tomm20a	93	91.726	ENSACIG00000006313	tomm20a	100	91.726	Amphilophus_citrinellus
ENSPREG00000007996	tomm20a	100	84.996	ENSAOCG00000003330	tomm20a	100	83.397	Amphiprion_ocellaris
ENSPREG00000007996	tomm20a	100	84.920	ENSAPEG00000024018	tomm20a	100	83.321	Amphiprion_percula
ENSPREG00000007996	tomm20a	100	83.422	ENSATEG00000014930	tomm20a	100	83.652	Anabas_testudineus
ENSPREG00000007996	tomm20a	100	50.250	ENSAPLG00000004422	ARID4B	99	48.772	Anas_platyrhynchos
ENSPREG00000007996	tomm20a	53	60.993	ENSACAG00000001289	ARID4B	99	50.558	Anolis_carolinensis
ENSPREG00000007996	tomm20a	100	51.495	ENSANAG00000038088	ARID4B	99	51.156	Aotus_nancymaae
ENSPREG00000007996	tomm20a	87	92.000	ENSACLG00000023521	tomm20a	98	89.423	Astatotilapia_calliptera
ENSPREG00000007996	tomm20a	85	89.796	ENSAMXG00000003657	tomm20a	90	76.755	Astyanax_mexicanus
ENSPREG00000007996	tomm20a	100	51.936	ENSBTAG00000000222	ARID4B	99	51.675	Bos_taurus
ENSPREG00000007996	tomm20a	54	61.699	ENSCJAG00000018055	ARID4B	62	61.678	Callithrix_jacchus
ENSPREG00000007996	tomm20a	100	51.817	ENSCAFG00000011439	ARID4B	54	61.560	Canis_familiaris
ENSPREG00000007996	tomm20a	99	51.879	ENSCAFG00020027130	ARID4B	54	60.986	Canis_lupus_dingo
ENSPREG00000007996	tomm20a	99	51.180	ENSCPOG00000034766	ARID4B	99	49.852	Cavia_porcellus
ENSPREG00000007996	tomm20a	54	60.912	ENSCCAG00000021520	ARID4B	54	60.809	Cebus_capucinus
ENSPREG00000007996	tomm20a	100	51.634	ENSCATG00000042166	ARID4B	54	60.809	Cercocebus_atys
ENSPREG00000007996	tomm20a	53	59.147	ENSCPBG00000004501	ARID4B	99	50.923	Chrysemys_picta_bellii
ENSPREG00000007996	tomm20a	99	78.217	ENSCSEG00000012928	tomm20a	98	78.019	Cynoglossus_semilaevis
ENSPREG00000007996	tomm20a	100	88.624	ENSCVAG00000003244	tomm20a	100	88.163	Cyprinodon_variegatus
ENSPREG00000007996	tomm20a	100	66.182	ENSDARG00000090656	tomm20a	99	66.096	Danio_rerio
ENSPREG00000007996	tomm20a	89	57.412	ENSETEG00000005596	ARID4B	93	56.706	Echinops_telfairi
ENSPREG00000007996	tomm20a	70	53.710	ENSELUG00000018441	tomm20a	91	54.485	Esox_lucius
ENSPREG00000007996	tomm20a	100	52.003	ENSFALG00000013548	ARID4B	97	51.134	Ficedula_albicollis
ENSPREG00000007996	tomm20a	100	88.506	ENSFHEG00000003798	tomm20a	100	88.199	Fundulus_heteroclitus
ENSPREG00000007996	tomm20a	90	73.123	ENSGMOG00000018747	tomm20a	91	70.267	Gadus_morhua
ENSPREG00000007996	tomm20a	99	76.180	ENSGACG00000004298	tomm20a	100	76.695	Gasterosteus_aculeatus
ENSPREG00000007996	tomm20a	91	70.519	ENSGAGG00000020544	ARID4B	97	50.867	Gopherus_agassizii
ENSPREG00000007996	tomm20a	100	81.575	ENSHBUG00000020369	tomm20a	100	81.728	Haplochromis_burtoni
ENSPREG00000007996	tomm20a	97	82.609	ENSHCOG00000010376	tomm20a	100	81.522	Hippocampus_comes
ENSPREG00000007996	tomm20a	100	62.991	ENSIPUG00000014234	arid4b	99	62.270	Ictalurus_punctatus
ENSPREG00000007996	tomm20a	53	61.150	ENSJJAG00000021368	Arid4b	54	60.912	Jaculus_jaculus
ENSPREG00000007996	tomm20a	84	91.463	ENSKMAG00000010987	tomm20a	98	91.935	Kryptolebias_marmoratus
ENSPREG00000007996	tomm20a	100	60.409	ENSLOCG00000015899	tomm20a	99	61.674	Lepisosteus_oculatus
ENSPREG00000007996	tomm20a	99	51.371	ENSLAFG00000014295	ARID4B	99	50.892	Loxodonta_africana
ENSPREG00000007996	tomm20a	93	82.213	ENSMAMG00000017134	tomm20a	99	82.058	Mastacembelus_armatus
ENSPREG00000007996	tomm20a	100	81.422	ENSMZEG00005009879	tomm20a	100	81.575	Maylandia_zebra
ENSPREG00000007996	tomm20a	100	51.168	ENSMGAG00000011896	ARID4B	99	50.515	Meleagris_gallopavo
ENSPREG00000007996	tomm20a	93	86.184	ENSMMOG00000000561	tomm20a	94	95.516	Mola_mola
ENSPREG00000007996	tomm20a	100	51.917	ENSMODG00000008417	ARID4B	99	51.711	Monodelphis_domestica
ENSPREG00000007996	tomm20a	100	82.722	ENSMALG00000005205	tomm20a	100	83.563	Monopterus_albus
ENSPREG00000007996	tomm20a	100	45.357	ENSMUSG00000039219	Arid4b	99	50.889	Mus_musculus
ENSPREG00000007996	tomm20a	100	52.044	MGP_SPRETEiJ_G0019094	Arid4b	99	51.183	Mus_spretus
ENSPREG00000007996	tomm20a	100	51.747	ENSNGAG00000014629	Arid4b	99	51.180	Nannospalax_galili
ENSPREG00000007996	tomm20a	93	87.736	ENSNBRG00000019684	tomm20a	100	89.858	Neolamprologus_brichardi
ENSPREG00000007996	tomm20a	100	51.491	ENSNLEG00000002665	ARID4B	54	60.948	Nomascus_leucogenys
ENSPREG00000007996	tomm20a	100	52.792	ENSODEG00000005373	ARID4B	99	51.596	Octodon_degus
ENSPREG00000007996	tomm20a	100	78.168	ENSORLG00000012510	tomm20a	100	76.947	Oryzias_latipes
ENSPREG00000007996	tomm20a	91	85.407	ENSORLG00020013988	tomm20a	100	86.353	Oryzias_latipes_hni
ENSPREG00000007996	tomm20a	91	85.817	ENSORLG00015022835	tomm20a	100	86.288	Oryzias_latipes_hsok
ENSPREG00000007996	tomm20a	100	79.173	ENSOMEG00000000521	tomm20a	100	79.096	Oryzias_melastigma
ENSPREG00000007996	tomm20a	99	52.811	ENSOARG00000003481	ARID4B	97	52.083	Ovis_aries
ENSPREG00000007996	tomm20a	100	52.471	ENSPPRG00000013739	ARID4B	99	52.054	Panthera_pardus
ENSPREG00000007996	tomm20a	100	53.206	ENSPTIG00000012520	ARID4B	99	52.612	Panthera_tigris_altaica
ENSPREG00000007996	tomm20a	93	49.272	ENSPSIG00000011632	ARID4B	99	48.171	Pelodiscus_sinensis
ENSPREG00000007996	tomm20a	57	54.212	ENSPMGG00000001596	tomm20a	89	78.295	Periophthalmus_magnuspinnatus
ENSPREG00000007996	tomm20a	100	51.982	ENSPCIG00000029756	ARID4B	99	51.194	Phascolarctos_cinereus
ENSPREG00000007996	tomm20a	100	97.224	ENSPFOG00000019430	tomm20a	100	97.224	Poecilia_formosa
ENSPREG00000007996	tomm20a	100	97.456	ENSPLAG00000010554	tomm20a	100	97.456	Poecilia_latipinna
ENSPREG00000007996	tomm20a	100	97.205	ENSPMEG00000003093	tomm20a	100	97.205	Poecilia_mexicana
ENSPREG00000007996	tomm20a	76	61.789	ENSPVAG00000015159	ARID4B	99	51.263	Pteropus_vampyrus
ENSPREG00000007996	tomm20a	99	76.935	ENSPNYG00000013988	tomm20a	100	75.383	Pundamilia_nyererei
ENSPREG00000007996	tomm20a	100	67.322	ENSPNAG00000000523	tomm20a	92	66.438	Pygocentrus_nattereri
ENSPREG00000007996	tomm20a	87	47.714	ENSRNOG00000016391	LOC100912163	96	47.475	Rattus_norvegicus
ENSPREG00000007996	tomm20a	94	70.455	ENSRBIG00000042029	ARID4B	92	58.931	Rhinopithecus_bieti
ENSPREG00000007996	tomm20a	100	51.491	ENSRROG00000045203	ARID4B	54	60.948	Rhinopithecus_roxellana
ENSPREG00000007996	tomm20a	100	50.838	ENSSHAG00000015214	ARID4B	99	50.996	Sarcophilus_harrisii
ENSPREG00000007996	tomm20a	100	59.880	ENSSFOG00015000132	arid4b	99	60.627	Scleropages_formosus
ENSPREG00000007996	tomm20a	75	49.701	ENSSFOG00015008923	tomm20a	98	48.279	Scleropages_formosus
ENSPREG00000007996	tomm20a	100	80.316	ENSSMAG00000010430	tomm20a	100	79.865	Scophthalmus_maximus
ENSPREG00000007996	tomm20a	100	84.962	ENSSDUG00000003019	tomm20a	100	83.664	Seriola_dumerili
ENSPREG00000007996	tomm20a	100	51.787	ENSSPUG00000015466	ARID4B	97	51.043	Sphenodon_punctatus
ENSPREG00000007996	tomm20a	100	84.375	ENSSPAG00000007358	tomm20a	100	83.155	Stegastes_partitus
ENSPREG00000007996	tomm20a	54	61.433	ENSSSCG00000010156	ARID4B	62	61.699	Sus_scrofa
ENSPREG00000007996	tomm20a	100	52.666	ENSTGUG00000010246	ARID4B	99	51.324	Taeniopygia_guttata
ENSPREG00000007996	tomm20a	69	69.147	ENSTRUG00000002893	tomm20a	100	67.325	Takifugu_rubripes
ENSPREG00000007996	tomm20a	71	69.533	ENSTBEG00000003961	ARID4B	61	68.796	Tupaia_belangeri
ENSPREG00000007996	tomm20a	100	52.750	ENSTTRG00000002228	ARID4B	54	60.585	Tursiops_truncatus
ENSPREG00000007996	tomm20a	69	58.674	ENSVPAG00000006841	ARID4B	68	59.551	Vicugna_pacos
ENSPREG00000007996	tomm20a	99	50.515	ENSVVUG00000008154	ARID4B	53	59.201	Vulpes_vulpes
ENSPREG00000007996	tomm20a	100	96.517	ENSXMAG00000006538	tomm20a	100	96.517	Xiphophorus_maculatus