EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008032 (Gene tree)
Gene ID: 103473614
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8235 bases
Position: chrLG12:14116712-14124946
Accession: 103473614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011818	RTC	PF01137.21	3.9e-58	1	1
ENSPREP00000011818	RTC_insert	PF05189.13	6.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011948	-	1119	XM_008423981	ENSPREP00000011818	372 (aa)	XP_008422203	UPI0004A2DA49

Gene Model

Click here to download ENSPREG00000008032's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008032	rcl1	99	78.919	ENSG00000120158	RCL1	100	81.019	Homo_sapiens
ENSPREG00000008032	rcl1	100	91.667	ENSAPOG00000015666	rcl1	100	91.667	Acanthochromis_polyacanthus
ENSPREG00000008032	rcl1	99	79.730	ENSAMEG00000002631	RCL1	99	79.730	Ailuropoda_melanoleuca
ENSPREG00000008032	rcl1	100	90.591	ENSACIG00000021195	rcl1	100	90.591	Amphilophus_citrinellus
ENSPREG00000008032	rcl1	100	91.398	ENSAOCG00000002223	rcl1	100	91.398	Amphiprion_ocellaris
ENSPREG00000008032	rcl1	100	91.667	ENSAPEG00000006905	rcl1	100	91.667	Amphiprion_percula
ENSPREG00000008032	rcl1	100	88.978	ENSATEG00000020026	rcl1	100	88.978	Anabas_testudineus
ENSPREG00000008032	rcl1	88	76.292	ENSAPLG00000006031	RCL1	100	76.292	Anas_platyrhynchos
ENSPREG00000008032	rcl1	99	73.514	ENSACAG00000003640	RCL1	99	73.514	Anolis_carolinensis
ENSPREG00000008032	rcl1	99	78.378	ENSANAG00000037372	RCL1	99	78.378	Aotus_nancymaae
ENSPREG00000008032	rcl1	100	90.591	ENSACLG00000021724	rcl1	100	90.591	Astatotilapia_calliptera
ENSPREG00000008032	rcl1	99	82.337	ENSAMXG00000033394	rcl1	99	82.337	Astyanax_mexicanus
ENSPREG00000008032	rcl1	99	46.032	WBGene00022852	ZK1127.5	99	46.032	Caenorhabditis_elegans
ENSPREG00000008032	rcl1	99	78.649	ENSCJAG00000011202	RCL1	99	78.649	Callithrix_jacchus
ENSPREG00000008032	rcl1	99	79.730	ENSCAFG00000002091	RCL1	99	79.730	Canis_familiaris
ENSPREG00000008032	rcl1	99	79.730	ENSCAFG00020000638	RCL1	77	79.730	Canis_lupus_dingo
ENSPREG00000008032	rcl1	99	78.649	ENSCHIG00000012407	RCL1	99	78.649	Capra_hircus
ENSPREG00000008032	rcl1	88	80.488	ENSTSYG00000009592	RCL1	97	81.319	Carlito_syrichta
ENSPREG00000008032	rcl1	66	69.753	ENSCAPG00000013575	RCL1	100	69.753	Cavia_aperea
ENSPREG00000008032	rcl1	99	78.919	ENSCPOG00000015354	RCL1	99	78.919	Cavia_porcellus
ENSPREG00000008032	rcl1	99	78.649	ENSCCAG00000033505	RCL1	99	78.649	Cebus_capucinus
ENSPREG00000008032	rcl1	99	78.649	ENSCATG00000034721	RCL1	99	78.649	Cercocebus_atys
ENSPREG00000008032	rcl1	99	78.919	ENSCLAG00000007445	RCL1	99	78.919	Chinchilla_lanigera
ENSPREG00000008032	rcl1	99	78.649	ENSCSAG00000008811	RCL1	99	78.649	Chlorocebus_sabaeus
ENSPREG00000008032	rcl1	86	69.279	ENSCHOG00000007216	RCL1	99	69.279	Choloepus_hoffmanni
ENSPREG00000008032	rcl1	100	75.668	ENSCPBG00000025481	RCL1	94	76.667	Chrysemys_picta_bellii
ENSPREG00000008032	rcl1	99	58.649	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSPREG00000008032	rcl1	99	78.649	ENSCANG00000027099	RCL1	99	78.649	Colobus_angolensis_palliatus
ENSPREG00000008032	rcl1	99	79.189	ENSCGRG00001013748	Rcl1	99	79.189	Cricetulus_griseus_chok1gshd
ENSPREG00000008032	rcl1	88	79.939	ENSCGRG00000005843	Rcl1	99	79.939	Cricetulus_griseus_crigri
ENSPREG00000008032	rcl1	100	88.710	ENSCSEG00000000712	rcl1	98	88.710	Cynoglossus_semilaevis
ENSPREG00000008032	rcl1	100	94.355	ENSCVAG00000011536	rcl1	100	94.355	Cyprinodon_variegatus
ENSPREG00000008032	rcl1	99	81.199	ENSDARG00000038312	rcl1	100	81.199	Danio_rerio
ENSPREG00000008032	rcl1	72	79.323	ENSDNOG00000019911	RCL1	100	81.019	Dasypus_novemcinctus
ENSPREG00000008032	rcl1	99	79.730	ENSDORG00000015645	Rcl1	99	79.730	Dipodomys_ordii
ENSPREG00000008032	rcl1	98	53.351	FBgn0020909	Rtc1	97	53.619	Drosophila_melanogaster
ENSPREG00000008032	rcl1	88	54.878	ENSETEG00000014087	-	100	54.878	Echinops_telfairi
ENSPREG00000008032	rcl1	100	54.692	ENSEBUG00000016621	-	99	54.692	Eptatretus_burgeri
ENSPREG00000008032	rcl1	99	78.919	ENSEASG00005010653	RCL1	99	78.919	Equus_asinus_asinus
ENSPREG00000008032	rcl1	99	78.919	ENSECAG00000015973	RCL1	99	78.919	Equus_caballus
ENSPREG00000008032	rcl1	99	67.297	ENSEEUG00000009801	RCL1	99	67.297	Erinaceus_europaeus
ENSPREG00000008032	rcl1	100	80.914	ENSELUG00000007353	rcl1	100	80.914	Esox_lucius
ENSPREG00000008032	rcl1	99	78.919	ENSFCAG00000014557	RCL1	99	78.919	Felis_catus
ENSPREG00000008032	rcl1	100	70.161	ENSFALG00000010553	RCL1	98	70.161	Ficedula_albicollis
ENSPREG00000008032	rcl1	88	77.744	ENSFDAG00000004209	RCL1	100	77.744	Fukomys_damarensis
ENSPREG00000008032	rcl1	100	95.161	ENSFHEG00000011228	rcl1	100	95.161	Fundulus_heteroclitus
ENSPREG00000008032	rcl1	100	82.527	ENSGMOG00000004677	rcl1	100	82.527	Gadus_morhua
ENSPREG00000008032	rcl1	99	74.663	ENSGALG00000015024	RCL1	99	74.663	Gallus_gallus
ENSPREG00000008032	rcl1	100	98.118	ENSGAFG00000007257	rcl1	100	98.118	Gambusia_affinis
ENSPREG00000008032	rcl1	100	88.172	ENSGACG00000017474	rcl1	100	88.172	Gasterosteus_aculeatus
ENSPREG00000008032	rcl1	100	75.668	ENSGAGG00000003689	RCL1	100	75.668	Gopherus_agassizii
ENSPREG00000008032	rcl1	99	78.378	ENSGGOG00000015041	RCL1	99	78.378	Gorilla_gorilla
ENSPREG00000008032	rcl1	100	90.860	ENSHBUG00000001393	rcl1	100	90.860	Haplochromis_burtoni
ENSPREG00000008032	rcl1	99	77.838	ENSHGLG00000016452	RCL1	99	77.838	Heterocephalus_glaber_female
ENSPREG00000008032	rcl1	99	65.854	ENSHGLG00000005368	-	99	65.854	Heterocephalus_glaber_female
ENSPREG00000008032	rcl1	99	66.667	ENSHGLG00100018010	-	99	66.667	Heterocephalus_glaber_male
ENSPREG00000008032	rcl1	99	72.432	ENSHGLG00100008718	-	99	72.432	Heterocephalus_glaber_male
ENSPREG00000008032	rcl1	100	89.785	ENSHCOG00000020170	rcl1	100	89.785	Hippocampus_comes
ENSPREG00000008032	rcl1	100	82.796	ENSIPUG00000018054	RCL1	100	82.796	Ictalurus_punctatus
ENSPREG00000008032	rcl1	99	77.838	ENSSTOG00000000023	RCL1	99	77.838	Ictidomys_tridecemlineatus
ENSPREG00000008032	rcl1	54	62.376	ENSJJAG00000000764	-	98	62.376	Jaculus_jaculus
ENSPREG00000008032	rcl1	99	79.459	ENSJJAG00000022803	-	99	79.459	Jaculus_jaculus
ENSPREG00000008032	rcl1	99	69.189	ENSJJAG00000015632	-	99	69.189	Jaculus_jaculus
ENSPREG00000008032	rcl1	100	92.742	ENSKMAG00000011946	rcl1	100	92.742	Kryptolebias_marmoratus
ENSPREG00000008032	rcl1	100	85.753	ENSLBEG00000003957	rcl1	100	85.753	Labrus_bergylta
ENSPREG00000008032	rcl1	93	75.072	ENSLACG00000004594	RCL1	100	79.193	Latimeria_chalumnae
ENSPREG00000008032	rcl1	100	79.839	ENSLOCG00000010148	rcl1	98	79.839	Lepisosteus_oculatus
ENSPREG00000008032	rcl1	99	77.568	ENSLAFG00000017495	RCL1	99	77.568	Loxodonta_africana
ENSPREG00000008032	rcl1	99	78.649	ENSMFAG00000037906	RCL1	99	78.649	Macaca_fascicularis
ENSPREG00000008032	rcl1	99	78.649	ENSMNEG00000012288	RCL1	99	78.649	Macaca_nemestrina
ENSPREG00000008032	rcl1	99	78.649	ENSMLEG00000043088	RCL1	99	78.649	Mandrillus_leucophaeus
ENSPREG00000008032	rcl1	100	91.935	ENSMAMG00000008311	rcl1	100	91.935	Mastacembelus_armatus
ENSPREG00000008032	rcl1	100	90.591	ENSMZEG00005017292	rcl1	100	90.591	Maylandia_zebra
ENSPREG00000008032	rcl1	58	74.091	ENSMGAG00000002245	RCL1	100	74.091	Meleagris_gallopavo
ENSPREG00000008032	rcl1	58	81.019	ENSMAUG00000008922	Rcl1	100	81.019	Mesocricetus_auratus
ENSPREG00000008032	rcl1	99	79.404	ENSMICG00000015562	RCL1	99	79.404	Microcebus_murinus
ENSPREG00000008032	rcl1	99	78.919	ENSMOCG00000012145	Rcl1	99	78.919	Microtus_ochrogaster
ENSPREG00000008032	rcl1	100	87.399	ENSMMOG00000021264	rcl1	100	87.399	Mola_mola
ENSPREG00000008032	rcl1	95	77.557	ENSMODG00000015377	RCL1	93	77.557	Monodelphis_domestica
ENSPREG00000008032	rcl1	100	90.323	ENSMALG00000018618	rcl1	100	90.323	Monopterus_albus
ENSPREG00000008032	rcl1	99	78.919	MGP_CAROLIEiJ_G0022853	Rcl1	99	78.919	Mus_caroli
ENSPREG00000008032	rcl1	99	78.378	ENSMUSG00000024785	Rcl1	99	78.378	Mus_musculus
ENSPREG00000008032	rcl1	99	79.189	MGP_PahariEiJ_G0014346	Rcl1	100	79.532	Mus_pahari
ENSPREG00000008032	rcl1	99	78.378	MGP_SPRETEiJ_G0023771	Rcl1	100	78.947	Mus_spretus
ENSPREG00000008032	rcl1	99	78.919	ENSMPUG00000004998	RCL1	99	78.919	Mustela_putorius_furo
ENSPREG00000008032	rcl1	99	77.568	ENSMLUG00000009654	RCL1	99	77.568	Myotis_lucifugus
ENSPREG00000008032	rcl1	99	78.919	ENSNGAG00000015327	Rcl1	99	78.919	Nannospalax_galili
ENSPREG00000008032	rcl1	91	88.724	ENSNBRG00000019854	rcl1	99	83.747	Neolamprologus_brichardi
ENSPREG00000008032	rcl1	99	76.757	ENSNLEG00000008891	RCL1	99	76.757	Nomascus_leucogenys
ENSPREG00000008032	rcl1	99	71.622	ENSMEUG00000007653	RCL1	99	71.622	Notamacropus_eugenii
ENSPREG00000008032	rcl1	99	77.027	ENSOPRG00000010965	RCL1	99	77.027	Ochotona_princeps
ENSPREG00000008032	rcl1	88	65.957	ENSODEG00000004151	RCL1	96	65.957	Octodon_degus
ENSPREG00000008032	rcl1	100	91.935	ENSONIG00000003871	rcl1	100	91.935	Oreochromis_niloticus
ENSPREG00000008032	rcl1	66	77.108	ENSOANG00000013193	-	98	77.108	Ornithorhynchus_anatinus
ENSPREG00000008032	rcl1	99	78.378	ENSOCUG00000008161	RCL1	99	78.378	Oryctolagus_cuniculus
ENSPREG00000008032	rcl1	100	86.022	ENSORLG00000010443	rcl1	100	86.022	Oryzias_latipes
ENSPREG00000008032	rcl1	100	86.290	ENSORLG00020012211	rcl1	100	86.290	Oryzias_latipes_hni
ENSPREG00000008032	rcl1	100	85.753	ENSORLG00015001122	rcl1	100	85.753	Oryzias_latipes_hsok
ENSPREG00000008032	rcl1	100	88.710	ENSOMEG00000022976	rcl1	88	88.710	Oryzias_melastigma
ENSPREG00000008032	rcl1	99	78.378	ENSOGAG00000007480	RCL1	99	78.378	Otolemur_garnettii
ENSPREG00000008032	rcl1	99	78.649	ENSOARG00000013463	RCL1	99	78.649	Ovis_aries
ENSPREG00000008032	rcl1	99	78.649	ENSPPAG00000037958	RCL1	99	78.649	Pan_paniscus
ENSPREG00000008032	rcl1	99	78.108	ENSPPRG00000022645	RCL1	99	78.108	Panthera_pardus
ENSPREG00000008032	rcl1	88	79.205	ENSPTIG00000019031	RCL1	100	80.093	Panthera_tigris_altaica
ENSPREG00000008032	rcl1	99	78.378	ENSPTRG00000020743	RCL1	99	78.378	Pan_troglodytes
ENSPREG00000008032	rcl1	99	78.649	ENSPANG00000025151	RCL1	99	78.649	Papio_anubis
ENSPREG00000008032	rcl1	100	80.645	ENSPKIG00000021022	rcl1	100	80.645	Paramormyrops_kingsleyae
ENSPREG00000008032	rcl1	88	77.204	ENSPSIG00000012302	RCL1	100	77.204	Pelodiscus_sinensis
ENSPREG00000008032	rcl1	100	89.785	ENSPMGG00000024007	rcl1	100	89.785	Periophthalmus_magnuspinnatus
ENSPREG00000008032	rcl1	99	79.189	ENSPEMG00000023275	Rcl1	99	79.189	Peromyscus_maniculatus_bairdii
ENSPREG00000008032	rcl1	98	30.728	ENSPMAG00000009110	rtca	97	30.728	Petromyzon_marinus
ENSPREG00000008032	rcl1	99	77.838	ENSPCIG00000000188	RCL1	99	77.838	Phascolarctos_cinereus
ENSPREG00000008032	rcl1	100	98.925	ENSPFOG00000019682	rcl1	99	98.925	Poecilia_formosa
ENSPREG00000008032	rcl1	100	99.194	ENSPLAG00000022354	rcl1	100	99.194	Poecilia_latipinna
ENSPREG00000008032	rcl1	100	98.925	ENSPMEG00000008131	rcl1	100	98.925	Poecilia_mexicana
ENSPREG00000008032	rcl1	99	79.189	ENSPPYG00000019244	RCL1	99	79.189	Pongo_abelii
ENSPREG00000008032	rcl1	99	72.703	ENSPCAG00000001440	RCL1	99	72.703	Procavia_capensis
ENSPREG00000008032	rcl1	99	79.459	ENSPCOG00000009611	RCL1	99	79.459	Propithecus_coquereli
ENSPREG00000008032	rcl1	99	78.378	ENSPVAG00000015752	RCL1	99	78.378	Pteropus_vampyrus
ENSPREG00000008032	rcl1	100	90.860	ENSPNYG00000012910	rcl1	100	90.860	Pundamilia_nyererei
ENSPREG00000008032	rcl1	99	82.609	ENSPNAG00000028307	rcl1	91	82.609	Pygocentrus_nattereri
ENSPREG00000008032	rcl1	99	78.108	ENSRNOG00000015491	Rcl1	99	78.108	Rattus_norvegicus
ENSPREG00000008032	rcl1	99	78.378	ENSRBIG00000035818	RCL1	99	78.378	Rhinopithecus_bieti
ENSPREG00000008032	rcl1	99	78.649	ENSRROG00000029781	RCL1	99	78.649	Rhinopithecus_roxellana
ENSPREG00000008032	rcl1	98	36.927	YOL010W	-	97	36.927	Saccharomyces_cerevisiae
ENSPREG00000008032	rcl1	99	78.919	ENSSBOG00000026369	RCL1	99	78.919	Saimiri_boliviensis_boliviensis
ENSPREG00000008032	rcl1	89	78.550	ENSSHAG00000014086	RCL1	100	78.550	Sarcophilus_harrisii
ENSPREG00000008032	rcl1	100	80.645	ENSSFOG00015023020	rcl1	100	80.645	Scleropages_formosus
ENSPREG00000008032	rcl1	100	90.591	ENSSMAG00000019751	rcl1	86	90.591	Scophthalmus_maximus
ENSPREG00000008032	rcl1	100	91.129	ENSSDUG00000006349	rcl1	100	91.129	Seriola_dumerili
ENSPREG00000008032	rcl1	100	90.323	ENSSLDG00000022076	rcl1	100	90.323	Seriola_lalandi_dorsalis
ENSPREG00000008032	rcl1	99	78.919	ENSSARG00000009260	RCL1	99	78.919	Sorex_araneus
ENSPREG00000008032	rcl1	99	76.486	ENSSPUG00000016330	RCL1	99	76.486	Sphenodon_punctatus
ENSPREG00000008032	rcl1	100	93.280	ENSSPAG00000018038	rcl1	100	93.280	Stegastes_partitus
ENSPREG00000008032	rcl1	99	78.919	ENSSSCG00000005217	RCL1	82	78.919	Sus_scrofa
ENSPREG00000008032	rcl1	99	74.194	ENSTGUG00000005138	RCL1	99	74.194	Taeniopygia_guttata
ENSPREG00000008032	rcl1	100	88.172	ENSTRUG00000010493	rcl1	100	88.172	Takifugu_rubripes
ENSPREG00000008032	rcl1	100	85.215	ENSTNIG00000013214	rcl1	99	85.215	Tetraodon_nigroviridis
ENSPREG00000008032	rcl1	99	74.324	ENSTBEG00000016339	RCL1	99	74.324	Tupaia_belangeri
ENSPREG00000008032	rcl1	99	78.378	ENSTTRG00000016525	RCL1	99	78.378	Tursiops_truncatus
ENSPREG00000008032	rcl1	99	79.730	ENSUAMG00000005598	RCL1	99	81.562	Ursus_americanus
ENSPREG00000008032	rcl1	88	79.878	ENSUMAG00000017890	RCL1	97	79.878	Ursus_maritimus
ENSPREG00000008032	rcl1	88	79.573	ENSVPAG00000009188	RCL1	100	79.573	Vicugna_pacos
ENSPREG00000008032	rcl1	88	80.851	ENSVVUG00000007304	RCL1	89	80.851	Vulpes_vulpes
ENSPREG00000008032	rcl1	100	71.733	ENSXETG00000000592	rcl1	100	71.733	Xenopus_tropicalis
ENSPREG00000008032	rcl1	100	99.194	ENSXCOG00000004922	rcl1	100	99.194	Xiphophorus_couchianus
ENSPREG00000008032	rcl1	100	99.194	ENSXMAG00000022366	RCL1	100	99.194	Xiphophorus_maculatus