EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008060 (Gene tree)
Gene ID: 103472987
Gene Symbol: sfpq
Alias: -
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 23433 bases
Position: chrLG11:27228801-27252233
Accession: 103472987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011851	RRM_1	PF00076.22	2.5e-31	1	2
ENSPREP00000011851	RRM_1	PF00076.22	2.5e-31	2	2
ENSPREP00000011868	RRM_1	PF00076.22	2.8e-31	1	2
ENSPREP00000011868	RRM_1	PF00076.22	2.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011982	-	2810	XM_008422878	ENSPREP00000011851	680 (aa)	XP_008421100	UPI0004A3A913
ENSPRET00000011999	-	2130	XM_008422876	ENSPREP00000011868	709 (aa)	XP_008421098	UPI0004A473B1

Gene Model

Click here to download ENSPREG00000008060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008060	sfpq	60	54.139	ENSPREG00000007786	pspc1	62	59.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008060	sfpq	66	78.678	ENSAPOG00000024257	sfpq	100	70.851	Acanthochromis_polyacanthus
ENSPREG00000008060	sfpq	59	69.444	ENSAMEG00000000815	SFPQ	98	67.593	Ailuropoda_melanoleuca
ENSPREG00000008060	sfpq	100	71.507	ENSACIG00000000905	sfpq	100	64.135	Amphilophus_citrinellus
ENSPREG00000008060	sfpq	68	77.755	ENSAOCG00000002889	sfpq	100	71.511	Amphiprion_ocellaris
ENSPREG00000008060	sfpq	68	77.755	ENSAPEG00000016556	sfpq	100	71.511	Amphiprion_percula
ENSPREG00000008060	sfpq	94	76.484	ENSATEG00000002981	sfpq	100	64.185	Anabas_testudineus
ENSPREG00000008060	sfpq	56	60.880	ENSANAG00000027438	-	90	47.761	Aotus_nancymaae
ENSPREG00000008060	sfpq	100	69.903	ENSACLG00000022332	sfpq	100	69.359	Astatotilapia_calliptera
ENSPREG00000008060	sfpq	63	71.239	ENSAMXG00000011538	sfpq	85	64.851	Astyanax_mexicanus
ENSPREG00000008060	sfpq	59	69.444	ENSCAFG00000003595	-	85	57.241	Canis_familiaris
ENSPREG00000008060	sfpq	59	66.898	ENSCAFG00000018271	-	82	55.398	Canis_familiaris
ENSPREG00000008060	sfpq	59	66.898	ENSCAFG00020004881	-	82	55.752	Canis_lupus_dingo
ENSPREG00000008060	sfpq	51	66.929	ENSCHOG00000009131	SFPQ	100	65.092	Choloepus_hoffmanni
ENSPREG00000008060	sfpq	59	68.349	ENSCPBG00000018674	SFPQ	85	57.793	Chrysemys_picta_bellii
ENSPREG00000008060	sfpq	59	69.213	ENSCGRG00001011698	Sfpq	90	53.149	Cricetulus_griseus_chok1gshd
ENSPREG00000008060	sfpq	58	69.142	ENSCGRG00000010128	Sfpq	95	67.361	Cricetulus_griseus_crigri
ENSPREG00000008060	sfpq	100	62.307	ENSCSEG00000007852	sfpq	100	62.025	Cynoglossus_semilaevis
ENSPREG00000008060	sfpq	100	73.698	ENSCVAG00000019538	sfpq	100	74.431	Cyprinodon_variegatus
ENSPREG00000008060	sfpq	59	74.524	ENSDARG00000011564	sfpq	100	78.261	Danio_rerio
ENSPREG00000008060	sfpq	59	63.194	ENSETEG00000001095	SFPQ	61	58.991	Echinops_telfairi
ENSPREG00000008060	sfpq	59	69.444	ENSEASG00005012012	SFPQ	90	52.968	Equus_asinus_asinus
ENSPREG00000008060	sfpq	59	69.444	ENSECAG00000000642	SFPQ	90	52.968	Equus_caballus
ENSPREG00000008060	sfpq	59	74.402	ENSELUG00000023145	sfpq	73	69.957	Esox_lucius
ENSPREG00000008060	sfpq	100	75.928	ENSFHEG00000015200	sfpq	100	78.134	Fundulus_heteroclitus
ENSPREG00000008060	sfpq	78	77.327	ENSGMOG00000011950	SFPQ	99	77.566	Gadus_morhua
ENSPREG00000008060	sfpq	57	71.320	ENSGALG00000002514	SFPQ	91	54.531	Gallus_gallus
ENSPREG00000008060	sfpq	100	93.653	ENSGAFG00000014571	sfpq	100	93.653	Gambusia_affinis
ENSPREG00000008060	sfpq	93	74.843	ENSGACG00000002034	sfpq	100	67.883	Gasterosteus_aculeatus
ENSPREG00000008060	sfpq	59	69.195	ENSGGOG00000026354	SFPQ	100	64.873	Gorilla_gorilla
ENSPREG00000008060	sfpq	100	69.903	ENSHBUG00000016818	sfpq	100	69.359	Haplochromis_burtoni
ENSPREG00000008060	sfpq	100	61.307	ENSHCOG00000008612	sfpq	91	77.095	Hippocampus_comes
ENSPREG00000008060	sfpq	65	69.762	ENSIPUG00000013076	SFPQ	86	64.271	Ictalurus_punctatus
ENSPREG00000008060	sfpq	100	68.142	ENSKMAG00000000238	sfpq	100	68.061	Kryptolebias_marmoratus
ENSPREG00000008060	sfpq	67	72.211	ENSLBEG00000003163	sfpq	94	64.548	Labrus_bergylta
ENSPREG00000008060	sfpq	95	52.958	ENSLOCG00000001067	sfpq	90	63.320	Lepisosteus_oculatus
ENSPREG00000008060	sfpq	59	69.444	ENSLAFG00000015951	SFPQ	86	57.319	Loxodonta_africana
ENSPREG00000008060	sfpq	100	63.470	ENSMAMG00000007875	sfpq	100	64.888	Mastacembelus_armatus
ENSPREG00000008060	sfpq	100	68.793	ENSMZEG00005026091	sfpq	100	68.245	Maylandia_zebra
ENSPREG00000008060	sfpq	51	65.903	ENSMGAG00000004237	SFPQ	100	63.265	Meleagris_gallopavo
ENSPREG00000008060	sfpq	59	66.667	ENSMOCG00000019075	Sfpq	89	65.278	Microtus_ochrogaster
ENSPREG00000008060	sfpq	100	67.500	ENSMMOG00000001074	sfpq	100	65.411	Mola_mola
ENSPREG00000008060	sfpq	100	71.698	ENSMALG00000010381	sfpq	100	65.546	Monopterus_albus
ENSPREG00000008060	sfpq	59	68.981	ENSMLUG00000027090	SFPQ	96	67.130	Myotis_lucifugus
ENSPREG00000008060	sfpq	100	68.333	ENSNBRG00000017479	sfpq	100	68.524	Neolamprologus_brichardi
ENSPREG00000008060	sfpq	59	69.231	ENSMEUG00000014082	SFPQ	61	68.765	Notamacropus_eugenii
ENSPREG00000008060	sfpq	61	68.233	ENSOPRG00000013696	SFPQ	62	66.890	Ochotona_princeps
ENSPREG00000008060	sfpq	100	67.867	ENSONIG00000017737	sfpq	100	67.149	Oreochromis_niloticus
ENSPREG00000008060	sfpq	59	69.444	ENSOCUG00000001877	SFPQ	90	64.655	Oryctolagus_cuniculus
ENSPREG00000008060	sfpq	100	67.024	ENSORLG00000007459	sfpq	100	68.835	Oryzias_latipes
ENSPREG00000008060	sfpq	100	66.755	ENSORLG00020011818	sfpq	100	68.421	Oryzias_latipes_hni
ENSPREG00000008060	sfpq	100	67.067	ENSORLG00015002131	sfpq	100	68.826	Oryzias_latipes_hsok
ENSPREG00000008060	sfpq	100	68.316	ENSOMEG00000018020	sfpq	100	69.492	Oryzias_melastigma
ENSPREG00000008060	sfpq	59	69.444	ENSOARG00000019439	SFPQ	66	67.824	Ovis_aries
ENSPREG00000008060	sfpq	59	69.444	ENSPPAG00000030078	SFPQ	61	68.056	Pan_paniscus
ENSPREG00000008060	sfpq	59	63.889	ENSPTRG00000000518	SFPQ	89	50.077	Pan_troglodytes
ENSPREG00000008060	sfpq	59	69.444	ENSPANG00000005380	SFPQ	64	68.056	Papio_anubis
ENSPREG00000008060	sfpq	65	70.860	ENSPKIG00000023035	sfpq	94	65.091	Paramormyrops_kingsleyae
ENSPREG00000008060	sfpq	59	69.444	ENSPSIG00000011494	SFPQ	99	67.130	Pelodiscus_sinensis
ENSPREG00000008060	sfpq	95	67.573	ENSPMGG00000023883	sfpq	100	58.635	Periophthalmus_magnuspinnatus
ENSPREG00000008060	sfpq	59	69.213	ENSPEMG00000009794	Sfpq	89	67.593	Peromyscus_maniculatus_bairdii
ENSPREG00000008060	sfpq	59	69.302	ENSPCIG00000000923	SFPQ	73	60.583	Phascolarctos_cinereus
ENSPREG00000008060	sfpq	100	90.688	ENSPFOG00000003127	sfpq	100	91.633	Poecilia_formosa
ENSPREG00000008060	sfpq	58	68.140	ENSPCAG00000006164	SFPQ	60	67.517	Procavia_capensis
ENSPREG00000008060	sfpq	59	67.907	ENSPVAG00000001865	SFPQ	90	51.524	Pteropus_vampyrus
ENSPREG00000008060	sfpq	100	70.360	ENSPNYG00000007494	sfpq	100	69.819	Pundamilia_nyererei
ENSPREG00000008060	sfpq	68	68.154	ENSPNAG00000002128	sfpq	89	66.111	Pygocentrus_nattereri
ENSPREG00000008060	sfpq	58	63.341	ENSRBIG00000035286	SFPQ	100	64.873	Rhinopithecus_bieti
ENSPREG00000008060	sfpq	59	69.444	ENSRROG00000040992	SFPQ	100	64.873	Rhinopithecus_roxellana
ENSPREG00000008060	sfpq	56	71.615	ENSSHAG00000016107	-	96	64.206	Sarcophilus_harrisii
ENSPREG00000008060	sfpq	70	67.245	ENSSFOG00015009289	sfpq	84	73.144	Scleropages_formosus
ENSPREG00000008060	sfpq	92	73.840	ENSSMAG00000018201	sfpq	100	61.972	Scophthalmus_maximus
ENSPREG00000008060	sfpq	98	74.067	ENSSDUG00000008402	sfpq	100	65.097	Seriola_dumerili
ENSPREG00000008060	sfpq	98	74.167	ENSSLDG00000018917	sfpq	100	65.097	Seriola_lalandi_dorsalis
ENSPREG00000008060	sfpq	50	67.838	ENSSARG00000006409	SFPQ	100	65.946	Sorex_araneus
ENSPREG00000008060	sfpq	65	78.925	ENSSPAG00000016550	sfpq	100	69.626	Stegastes_partitus
ENSPREG00000008060	sfpq	59	69.444	ENSSSCG00000035690	SFPQ	89	54.160	Sus_scrofa
ENSPREG00000008060	sfpq	59	69.213	ENSTGUG00000001722	SFPQ	99	67.361	Taeniopygia_guttata
ENSPREG00000008060	sfpq	100	65.928	ENSTRUG00000003783	sfpq	100	66.667	Takifugu_rubripes
ENSPREG00000008060	sfpq	88	66.507	ENSTNIG00000011331	sfpq	95	67.145	Tetraodon_nigroviridis
ENSPREG00000008060	sfpq	60	65.919	ENSXETG00000009682	sfpq	96	74.074	Xenopus_tropicalis
ENSPREG00000008060	sfpq	100	96.029	ENSXMAG00000016391	sfpq	100	96.029	Xiphophorus_maculatus