EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008067 (Gene tree)
Gene ID: 103462625
Gene Symbol: larp6a
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6624 bases
Position: chrLG3:26286203-26292826
Accession: 103462625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000011866	La	PF05383.17	9.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000011997	-	2997	XM_008405524	ENSPREP00000011866	687 (aa)	XP_008403746	UPI0004A40B1F

Gene Model

Click here to download ENSPREG00000008067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008067	larp6a	58	31.750	ENSPREG00000011853	-	83	31.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008067	larp6a	63	59.193	ENSG00000166173	LARP6	87	59.193	Homo_sapiens
ENSPREG00000008067	larp6a	100	85.879	ENSAPOG00000021773	larp6a	100	85.014	Acanthochromis_polyacanthus
ENSPREG00000008067	larp6a	61	60.277	ENSAMEG00000008897	LARP6	97	60.277	Ailuropoda_melanoleuca
ENSPREG00000008067	larp6a	74	91.683	ENSACIG00000005166	larp6a	100	90.891	Amphilophus_citrinellus
ENSPREG00000008067	larp6a	100	85.983	ENSAOCG00000002284	larp6a	100	85.116	Amphiprion_ocellaris
ENSPREG00000008067	larp6a	75	90.272	ENSAPEG00000008077	larp6a	100	89.494	Amphiprion_percula
ENSPREG00000008067	larp6a	100	83.262	ENSATEG00000004018	larp6a	100	82.976	Anabas_testudineus
ENSPREG00000008067	larp6a	60	60.047	ENSAPLG00000009914	LARP6	98	60.047	Anas_platyrhynchos
ENSPREG00000008067	larp6a	61	60.047	ENSACAG00000008613	LARP6	99	59.861	Anolis_carolinensis
ENSPREG00000008067	larp6a	63	59.417	ENSANAG00000024860	LARP6	87	59.417	Aotus_nancymaae
ENSPREG00000008067	larp6a	100	84.660	ENSACLG00000018561	larp6a	97	84.226	Astatotilapia_calliptera
ENSPREG00000008067	larp6a	77	78.745	ENSAMXG00000029387	larp6a	100	61.602	Astyanax_mexicanus
ENSPREG00000008067	larp6a	61	39.161	ENSAMXG00000036816	-	94	40.559	Astyanax_mexicanus
ENSPREG00000008067	larp6a	63	60.090	ENSBTAG00000003915	LARP6	87	60.090	Bos_taurus
ENSPREG00000008067	larp6a	63	59.101	ENSCJAG00000018642	-	95	57.320	Callithrix_jacchus
ENSPREG00000008067	larp6a	67	56.907	ENSCJAG00000046236	-	87	58.652	Callithrix_jacchus
ENSPREG00000008067	larp6a	61	60.046	ENSCAFG00000017616	LARP6	97	59.861	Canis_familiaris
ENSPREG00000008067	larp6a	67	57.613	ENSCAFG00020007296	LARP6	88	59.375	Canis_lupus_dingo
ENSPREG00000008067	larp6a	63	60.090	ENSCHIG00000013742	LARP6	87	60.090	Capra_hircus
ENSPREG00000008067	larp6a	62	58.770	ENSTSYG00000028124	LARP6	86	58.770	Carlito_syrichta
ENSPREG00000008067	larp6a	60	59.016	ENSCAPG00000015452	LARP6	97	58.741	Cavia_aperea
ENSPREG00000008067	larp6a	68	56.442	ENSCPOG00000022687	LARP6	87	58.427	Cavia_porcellus
ENSPREG00000008067	larp6a	63	59.417	ENSCCAG00000036320	LARP6	95	57.732	Cebus_capucinus
ENSPREG00000008067	larp6a	63	59.193	ENSCATG00000042432	LARP6	87	59.193	Cercocebus_atys
ENSPREG00000008067	larp6a	64	58.811	ENSCLAG00000007893	LARP6	97	57.172	Chinchilla_lanigera
ENSPREG00000008067	larp6a	63	59.193	ENSCSAG00000013672	LARP6	87	59.193	Chlorocebus_sabaeus
ENSPREG00000008067	larp6a	63	58.969	ENSCHOG00000003318	LARP6	90	58.969	Choloepus_hoffmanni
ENSPREG00000008067	larp6a	63	62.132	ENSCPBG00000010771	LARP6	88	60.510	Chrysemys_picta_bellii
ENSPREG00000008067	larp6a	61	59.629	ENSCANG00000025833	LARP6	98	59.629	Colobus_angolensis_palliatus
ENSPREG00000008067	larp6a	63	59.598	ENSCGRG00001024472	Larp6	95	57.787	Cricetulus_griseus_chok1gshd
ENSPREG00000008067	larp6a	63	59.598	ENSCGRG00000004527	Larp6	95	57.787	Cricetulus_griseus_crigri
ENSPREG00000008067	larp6a	91	83.706	ENSCSEG00000011196	larp6a	96	82.399	Cynoglossus_semilaevis
ENSPREG00000008067	larp6a	100	89.130	ENSCVAG00000009605	larp6a	100	89.130	Cyprinodon_variegatus
ENSPREG00000008067	larp6a	69	82.809	ENSDARG00000005355	larp6a	99	83.603	Danio_rerio
ENSPREG00000008067	larp6a	63	58.465	ENSDNOG00000042993	LARP6	87	58.465	Dasypus_novemcinctus
ENSPREG00000008067	larp6a	67	54.959	ENSDORG00000023910	Larp6	88	58.667	Dipodomys_ordii
ENSPREG00000008067	larp6a	63	60.090	ENSEASG00005005490	LARP6	64	60.090	Equus_asinus_asinus
ENSPREG00000008067	larp6a	63	60.314	ENSECAG00000014190	LARP6	96	59.375	Equus_caballus
ENSPREG00000008067	larp6a	100	71.612	ENSELUG00000007341	larp6a	100	71.755	Esox_lucius
ENSPREG00000008067	larp6a	63	58.744	ENSFCAG00000001361	LARP6	87	58.744	Felis_catus
ENSPREG00000008067	larp6a	63	60.538	ENSFALG00000012389	LARP6	97	59.368	Ficedula_albicollis
ENSPREG00000008067	larp6a	62	59.091	ENSFDAG00000019994	LARP6	83	59.091	Fukomys_damarensis
ENSPREG00000008067	larp6a	100	92.285	ENSFHEG00000010312	larp6a	100	92.140	Fundulus_heteroclitus
ENSPREG00000008067	larp6a	63	60.722	ENSGALG00000004046	LARP6	87	60.722	Gallus_gallus
ENSPREG00000008067	larp6a	100	94.614	ENSGAFG00000009426	larp6a	100	94.323	Gambusia_affinis
ENSPREG00000008067	larp6a	62	88.837	ENSGACG00000014622	larp6a	99	88.837	Gasterosteus_aculeatus
ENSPREG00000008067	larp6a	62	58.581	ENSGAGG00000010802	LARP6	63	58.581	Gopherus_agassizii
ENSPREG00000008067	larp6a	61	59.629	ENSGGOG00000024151	LARP6	98	59.629	Gorilla_gorilla
ENSPREG00000008067	larp6a	100	84.660	ENSHBUG00000021014	larp6a	97	84.226	Haplochromis_burtoni
ENSPREG00000008067	larp6a	63	60.314	ENSHGLG00000015112	LARP6	95	58.522	Heterocephalus_glaber_female
ENSPREG00000008067	larp6a	61	60.557	ENSHGLG00100013159	LARP6	98	60.557	Heterocephalus_glaber_male
ENSPREG00000008067	larp6a	71	85.484	ENSHCOG00000001241	larp6a	100	82.115	Hippocampus_comes
ENSPREG00000008067	larp6a	100	63.136	ENSIPUG00000010187	larp6	100	64.124	Ictalurus_punctatus
ENSPREG00000008067	larp6a	63	58.969	ENSSTOG00000024279	LARP6	93	58.969	Ictidomys_tridecemlineatus
ENSPREG00000008067	larp6a	63	58.520	ENSJJAG00000011013	Larp6	96	56.442	Jaculus_jaculus
ENSPREG00000008067	larp6a	100	78.738	ENSKMAG00000001702	larp6a	100	79.835	Kryptolebias_marmoratus
ENSPREG00000008067	larp6a	75	86.381	ENSLBEG00000000170	larp6a	100	85.603	Labrus_bergylta
ENSPREG00000008067	larp6a	69	64.256	ENSLACG00000018706	LARP6	91	64.669	Latimeria_chalumnae
ENSPREG00000008067	larp6a	60	44.418	ENSLACG00000002786	-	95	44.787	Latimeria_chalumnae
ENSPREG00000008067	larp6a	100	64.265	ENSLOCG00000014592	larp6a	100	63.728	Lepisosteus_oculatus
ENSPREG00000008067	larp6a	59	43.160	ENSLOCG00000008547	-	80	45.154	Lepisosteus_oculatus
ENSPREG00000008067	larp6a	63	59.865	ENSLAFG00000016343	LARP6	96	59.865	Loxodonta_africana
ENSPREG00000008067	larp6a	63	59.193	ENSMFAG00000035507	LARP6	96	59.193	Macaca_fascicularis
ENSPREG00000008067	larp6a	63	59.193	ENSMMUG00000004429	LARP6	90	59.193	Macaca_mulatta
ENSPREG00000008067	larp6a	63	59.193	ENSMNEG00000045335	LARP6	87	59.193	Macaca_nemestrina
ENSPREG00000008067	larp6a	61	59.629	ENSMLEG00000038587	LARP6	98	59.629	Mandrillus_leucophaeus
ENSPREG00000008067	larp6a	100	83.815	ENSMAMG00000005261	larp6a	100	83.382	Mastacembelus_armatus
ENSPREG00000008067	larp6a	100	84.805	ENSMZEG00005005774	larp6a	97	84.370	Maylandia_zebra
ENSPREG00000008067	larp6a	60	62.207	ENSMGAG00000005077	LARP6	98	62.061	Meleagris_gallopavo
ENSPREG00000008067	larp6a	63	58.744	ENSMAUG00000018486	Larp6	95	57.407	Mesocricetus_auratus
ENSPREG00000008067	larp6a	63	58.520	ENSMICG00000011234	LARP6	95	56.818	Microcebus_murinus
ENSPREG00000008067	larp6a	63	59.417	ENSMOCG00000010492	Larp6	95	57.613	Microtus_ochrogaster
ENSPREG00000008067	larp6a	75	86.381	ENSMMOG00000016284	larp6a	100	85.603	Mola_mola
ENSPREG00000008067	larp6a	63	56.854	ENSMODG00000009034	LARP6	83	56.854	Monodelphis_domestica
ENSPREG00000008067	larp6a	74	88.317	ENSMALG00000014439	larp6a	98	87.525	Monopterus_albus
ENSPREG00000008067	larp6a	64	58.811	MGP_CAROLIEiJ_G0032314	Larp6	96	57.407	Mus_caroli
ENSPREG00000008067	larp6a	64	58.590	ENSMUSG00000034839	Larp6	95	57.407	Mus_musculus
ENSPREG00000008067	larp6a	64	58.590	MGP_PahariEiJ_G0015180	Larp6	95	57.202	Mus_pahari
ENSPREG00000008067	larp6a	64	58.811	MGP_SPRETEiJ_G0033452	Larp6	95	57.613	Mus_spretus
ENSPREG00000008067	larp6a	62	59.276	ENSMPUG00000017086	LARP6	97	59.491	Mustela_putorius_furo
ENSPREG00000008067	larp6a	63	59.326	ENSMLUG00000010319	LARP6	87	59.326	Myotis_lucifugus
ENSPREG00000008067	larp6a	63	59.641	ENSNGAG00000014238	Larp6	87	59.641	Nannospalax_galili
ENSPREG00000008067	larp6a	75	90.856	ENSNBRG00000008120	larp6a	100	90.078	Neolamprologus_brichardi
ENSPREG00000008067	larp6a	63	59.193	ENSNLEG00000013691	LARP6	88	59.193	Nomascus_leucogenys
ENSPREG00000008067	larp6a	52	65.385	ENSMEUG00000002270	LARP6	75	67.213	Notamacropus_eugenii
ENSPREG00000008067	larp6a	51	55.890	ENSOPRG00000004868	-	99	55.890	Ochotona_princeps
ENSPREG00000008067	larp6a	63	59.410	ENSODEG00000015958	LARP6	95	57.292	Octodon_degus
ENSPREG00000008067	larp6a	75	90.116	ENSONIG00000002901	larp6a	100	89.341	Oreochromis_niloticus
ENSPREG00000008067	larp6a	59	59.268	ENSOCUG00000009306	LARP6	97	59.574	Oryctolagus_cuniculus
ENSPREG00000008067	larp6a	72	89.336	ENSORLG00000014256	larp6a	99	88.531	Oryzias_latipes
ENSPREG00000008067	larp6a	100	83.188	ENSORLG00020019657	larp6a	100	82.464	Oryzias_latipes_hni
ENSPREG00000008067	larp6a	100	83.768	ENSORLG00015017915	larp6a	100	83.188	Oryzias_latipes_hsok
ENSPREG00000008067	larp6a	100	84.325	ENSOMEG00000017049	larp6a	100	83.745	Oryzias_melastigma
ENSPREG00000008067	larp6a	63	58.597	ENSOGAG00000000522	LARP6	87	59.459	Otolemur_garnettii
ENSPREG00000008067	larp6a	61	60.417	ENSOARG00000018750	LARP6	97	60.417	Ovis_aries
ENSPREG00000008067	larp6a	61	59.629	ENSPPAG00000031247	LARP6	98	59.629	Pan_paniscus
ENSPREG00000008067	larp6a	63	58.520	ENSPPRG00000011282	LARP6	87	58.969	Panthera_pardus
ENSPREG00000008067	larp6a	61	59.629	ENSPTIG00000015318	LARP6	85	59.629	Panthera_tigris_altaica
ENSPREG00000008067	larp6a	63	59.193	ENSPTRG00000007234	LARP6	87	59.193	Pan_troglodytes
ENSPREG00000008067	larp6a	63	59.193	ENSPANG00000016362	LARP6	87	59.193	Papio_anubis
ENSPREG00000008067	larp6a	100	61.615	ENSPKIG00000020103	larp6a	89	74.627	Paramormyrops_kingsleyae
ENSPREG00000008067	larp6a	100	63.248	ENSPKIG00000004511	LARP6	100	63.143	Paramormyrops_kingsleyae
ENSPREG00000008067	larp6a	71	90.612	ENSPMGG00000006958	larp6a	98	89.796	Periophthalmus_magnuspinnatus
ENSPREG00000008067	larp6a	67	57.172	ENSPEMG00000012909	Larp6	95	57.172	Peromyscus_maniculatus_bairdii
ENSPREG00000008067	larp6a	63	57.143	ENSPCIG00000020765	LARP6	83	57.143	Phascolarctos_cinereus
ENSPREG00000008067	larp6a	75	97.868	ENSPFOG00000014175	larp6a	100	97.868	Poecilia_formosa
ENSPREG00000008067	larp6a	100	97.547	ENSPLAG00000011105	larp6a	100	97.547	Poecilia_latipinna
ENSPREG00000008067	larp6a	100	98.119	ENSPMEG00000011085	larp6a	100	98.119	Poecilia_mexicana
ENSPREG00000008067	larp6a	63	59.193	ENSPPYG00000006604	LARP6	87	59.193	Pongo_abelii
ENSPREG00000008067	larp6a	63	58.520	ENSPCOG00000022934	LARP6	87	58.520	Propithecus_coquereli
ENSPREG00000008067	larp6a	63	60.090	ENSPVAG00000005618	LARP6	95	58.436	Pteropus_vampyrus
ENSPREG00000008067	larp6a	75	90.467	ENSPNYG00000009835	larp6a	100	89.689	Pundamilia_nyererei
ENSPREG00000008067	larp6a	73	76.699	ENSPNAG00000017966	larp6a	87	74.488	Pygocentrus_nattereri
ENSPREG00000008067	larp6a	63	59.598	ENSRNOG00000012438	Larp6	95	57.407	Rattus_norvegicus
ENSPREG00000008067	larp6a	66	57.627	ENSRBIG00000032902	LARP6	88	58.837	Rhinopithecus_bieti
ENSPREG00000008067	larp6a	63	59.193	ENSRROG00000043074	LARP6	87	59.193	Rhinopithecus_roxellana
ENSPREG00000008067	larp6a	61	59.861	ENSSBOG00000024190	LARP6	98	59.861	Saimiri_boliviensis_boliviensis
ENSPREG00000008067	larp6a	62	54.691	ENSSHAG00000018495	LARP6	99	55.835	Sarcophilus_harrisii
ENSPREG00000008067	larp6a	63	77.136	ENSSFOG00015023268	larp6a	95	71.516	Scleropages_formosus
ENSPREG00000008067	larp6a	69	72.385	ENSSFOG00015002254	LARP6	98	68.297	Scleropages_formosus
ENSPREG00000008067	larp6a	100	80.456	ENSSMAG00000009953	larp6a	100	80.742	Scophthalmus_maximus
ENSPREG00000008067	larp6a	100	83.357	ENSSDUG00000007438	larp6a	100	82.927	Seriola_dumerili
ENSPREG00000008067	larp6a	100	83.597	ENSSLDG00000016647	larp6a	100	83.165	Seriola_lalandi_dorsalis
ENSPREG00000008067	larp6a	61	61.647	ENSSPUG00000011312	LARP6	98	61.647	Sphenodon_punctatus
ENSPREG00000008067	larp6a	100	85.755	ENSSPAG00000020502	larp6a	100	84.892	Stegastes_partitus
ENSPREG00000008067	larp6a	63	59.865	ENSSSCG00000004974	LARP6	87	59.865	Sus_scrofa
ENSPREG00000008067	larp6a	60	60.514	ENSTGUG00000005808	LARP6	98	60.514	Taeniopygia_guttata
ENSPREG00000008067	larp6a	100	75.578	ENSTRUG00000003151	larp6a	100	75.578	Takifugu_rubripes
ENSPREG00000008067	larp6a	71	82.546	ENSTNIG00000011926	larp6a	100	82.136	Tetraodon_nigroviridis
ENSPREG00000008067	larp6a	60	58.796	ENSTBEG00000015077	LARP6	98	58.796	Tupaia_belangeri
ENSPREG00000008067	larp6a	69	55.668	ENSUAMG00000010467	LARP6	84	59.815	Ursus_americanus
ENSPREG00000008067	larp6a	62	59.410	ENSVVUG00000015227	LARP6	93	59.629	Vulpes_vulpes
ENSPREG00000008067	larp6a	67	62.393	ENSXETG00000020340	larp6	93	62.025	Xenopus_tropicalis
ENSPREG00000008067	larp6a	69	97.484	ENSXCOG00000012654	larp6a	98	97.484	Xiphophorus_couchianus
ENSPREG00000008067	larp6a	100	96.215	ENSXMAG00000021015	larp6a	96	96.215	Xiphophorus_maculatus