EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008142 (Gene tree)
Gene ID: 103473617
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 44551 bases
Position: chrLG12:14147636-14192186
Accession: 103473617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012018	DNA_pol_A_exo1	PF01612.20	3e-21	1	1
ENSPREP00000011976	DNA_pol_A_exo1	PF01612.20	3.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012109	-	2705	XM_008423984	ENSPREP00000011976	890 (aa)	XP_008422206	UPI0004A25893
ENSPRET00000012152	-	2465	XM_017308009	ENSPREP00000012018	810 (aa)	XP_017163498	UPI0004A2598F

Gene Model

Click here to download ENSPREG00000008142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008142	exd3	97	40.091	ENSG00000187609	EXD3	96	39.636	Homo_sapiens
ENSPREG00000008142	exd3	99	74.413	ENSAPOG00000015520	exd3	97	77.073	Acanthochromis_polyacanthus
ENSPREG00000008142	exd3	99	68.415	ENSACIG00000005561	exd3	93	68.187	Amphilophus_citrinellus
ENSPREG00000008142	exd3	99	75.336	ENSAOCG00000007721	exd3	98	74.888	Amphiprion_ocellaris
ENSPREG00000008142	exd3	99	75.673	ENSAPEG00000007019	exd3	99	75.224	Amphiprion_percula
ENSPREG00000008142	exd3	98	74.201	ENSATEG00000019941	exd3	98	74.886	Anabas_testudineus
ENSPREG00000008142	exd3	91	44.236	ENSAPLG00000015358	EXD3	99	44.236	Anas_platyrhynchos
ENSPREG00000008142	exd3	51	44.340	ENSACAG00000014448	-	93	44.340	Anolis_carolinensis
ENSPREG00000008142	exd3	94	37.603	ENSANAG00000019674	EXD3	96	37.091	Aotus_nancymaae
ENSPREG00000008142	exd3	100	73.012	ENSACLG00000021922	exd3	99	73.012	Astatotilapia_calliptera
ENSPREG00000008142	exd3	99	53.803	ENSAMXG00000019494	exd3	99	53.579	Astyanax_mexicanus
ENSPREG00000008142	exd3	96	39.055	ENSBTAG00000023788	EXD3	99	39.055	Bos_taurus
ENSPREG00000008142	exd3	97	38.861	ENSCJAG00000013170	EXD3	96	38.435	Callithrix_jacchus
ENSPREG00000008142	exd3	99	40.340	ENSCAFG00000019444	EXD3	98	39.888	Canis_familiaris
ENSPREG00000008142	exd3	96	39.848	ENSCAFG00020003171	EXD3	91	39.211	Canis_lupus_dingo
ENSPREG00000008142	exd3	97	39.015	ENSCCAG00000027996	EXD3	96	38.095	Cebus_capucinus
ENSPREG00000008142	exd3	97	40.227	ENSCSAG00000016661	EXD3	96	40.000	Chlorocebus_sabaeus
ENSPREG00000008142	exd3	88	44.505	ENSCPBG00000011686	EXD3	88	43.725	Chrysemys_picta_bellii
ENSPREG00000008142	exd3	92	30.619	ENSCING00000002195	-	99	30.524	Ciona_intestinalis
ENSPREG00000008142	exd3	97	40.227	ENSCANG00000040692	EXD3	96	39.773	Colobus_angolensis_palliatus
ENSPREG00000008142	exd3	99	68.232	ENSCSEG00000000750	exd3	99	67.985	Cynoglossus_semilaevis
ENSPREG00000008142	exd3	99	81.685	ENSCVAG00000011560	exd3	99	81.461	Cyprinodon_variegatus
ENSPREG00000008142	exd3	99	55.102	ENSDARG00000063140	exd3	100	54.587	Danio_rerio
ENSPREG00000008142	exd3	95	40.797	ENSEASG00005016023	EXD3	96	40.797	Equus_asinus_asinus
ENSPREG00000008142	exd3	97	40.367	ENSECAG00000017546	EXD3	95	40.367	Equus_caballus
ENSPREG00000008142	exd3	74	44.634	ENSEEUG00000000405	-	88	41.478	Erinaceus_europaeus
ENSPREG00000008142	exd3	99	58.677	ENSELUG00000007181	exd3	99	59.117	Esox_lucius
ENSPREG00000008142	exd3	97	38.252	ENSFCAG00000003579	EXD3	96	38.171	Felis_catus
ENSPREG00000008142	exd3	91	43.735	ENSFALG00000005132	EXD3	97	43.735	Ficedula_albicollis
ENSPREG00000008142	exd3	99	70.688	ENSFHEG00000011352	exd3	98	70.688	Fundulus_heteroclitus
ENSPREG00000008142	exd3	58	46.774	ENSGMOG00000013542	-	99	46.774	Gadus_morhua
ENSPREG00000008142	exd3	97	42.356	ENSGALG00000052646	EXD3	97	42.356	Gallus_gallus
ENSPREG00000008142	exd3	100	90.695	ENSGAFG00000007328	exd3	100	90.471	Gambusia_affinis
ENSPREG00000008142	exd3	91	67.383	ENSGACG00000017442	exd3	100	67.248	Gasterosteus_aculeatus
ENSPREG00000008142	exd3	90	40.379	ENSGAGG00000011888	EXD3	92	40.136	Gopherus_agassizii
ENSPREG00000008142	exd3	79	59.286	ENSGGOG00000024724	EXD3	95	48.560	Gorilla_gorilla
ENSPREG00000008142	exd3	100	73.012	ENSHBUG00000001405	exd3	99	73.012	Haplochromis_burtoni
ENSPREG00000008142	exd3	99	65.840	ENSHCOG00000020087	exd3	99	65.424	Hippocampus_comes
ENSPREG00000008142	exd3	99	51.508	ENSIPUG00000020343	exd3	99	52.429	Ictalurus_punctatus
ENSPREG00000008142	exd3	99	77.578	ENSKMAG00000011881	exd3	99	77.691	Kryptolebias_marmoratus
ENSPREG00000008142	exd3	99	69.544	ENSLBEG00000004079	exd3	96	68.464	Labrus_bergylta
ENSPREG00000008142	exd3	98	48.864	ENSLOCG00000002330	exd3	99	49.212	Lepisosteus_oculatus
ENSPREG00000008142	exd3	92	37.881	ENSLAFG00000001122	EXD3	98	37.963	Loxodonta_africana
ENSPREG00000008142	exd3	97	39.616	ENSMFAG00000037569	EXD3	96	39.506	Macaca_fascicularis
ENSPREG00000008142	exd3	95	48.315	ENSMNEG00000033487	EXD3	96	39.169	Macaca_nemestrina
ENSPREG00000008142	exd3	97	38.750	ENSMLEG00000040548	EXD3	95	38.644	Mandrillus_leucophaeus
ENSPREG00000008142	exd3	99	71.040	ENSMAMG00000008407	exd3	98	71.965	Mastacembelus_armatus
ENSPREG00000008142	exd3	100	73.012	ENSMZEG00005017270	exd3	99	73.012	Maylandia_zebra
ENSPREG00000008142	exd3	88	43.933	ENSMGAG00000001267	EXD3	99	43.280	Meleagris_gallopavo
ENSPREG00000008142	exd3	95	68.558	ENSMMOG00000021267	exd3	99	67.612	Mola_mola
ENSPREG00000008142	exd3	58	45.387	ENSMODG00000028091	-	97	45.387	Monodelphis_domestica
ENSPREG00000008142	exd3	100	70.407	ENSMALG00000018523	exd3	100	70.284	Monopterus_albus
ENSPREG00000008142	exd3	96	38.514	ENSMPUG00000015130	EXD3	96	38.662	Mustela_putorius_furo
ENSPREG00000008142	exd3	99	70.375	ENSNBRG00000019734	exd3	98	69.353	Neolamprologus_brichardi
ENSPREG00000008142	exd3	92	40.239	ENSNLEG00000009095	-	95	40.265	Nomascus_leucogenys
ENSPREG00000008142	exd3	91	72.177	ENSONIG00000003880	exd3	97	71.640	Oreochromis_niloticus
ENSPREG00000008142	exd3	92	39.136	ENSOANG00000012485	-	99	39.529	Ornithorhynchus_anatinus
ENSPREG00000008142	exd3	99	71.879	ENSORLG00000010377	exd3	99	71.766	Oryzias_latipes
ENSPREG00000008142	exd3	99	71.654	ENSORLG00020012287	exd3	99	71.541	Oryzias_latipes_hni
ENSPREG00000008142	exd3	99	72.348	ENSORLG00015001156	exd3	99	72.235	Oryzias_latipes_hsok
ENSPREG00000008142	exd3	99	71.348	ENSOMEG00000023060	exd3	99	71.687	Oryzias_melastigma
ENSPREG00000008142	exd3	97	40.068	ENSPPAG00000042435	EXD3	96	39.501	Pan_paniscus
ENSPREG00000008142	exd3	97	38.462	ENSPPRG00000004634	EXD3	97	38.219	Panthera_pardus
ENSPREG00000008142	exd3	97	38.794	ENSPANG00000026338	EXD3	96	38.794	Papio_anubis
ENSPREG00000008142	exd3	99	53.933	ENSPKIG00000021103	exd3	99	53.716	Paramormyrops_kingsleyae
ENSPREG00000008142	exd3	95	41.846	ENSPSIG00000007745	EXD3	93	41.396	Pelodiscus_sinensis
ENSPREG00000008142	exd3	99	66.439	ENSPMGG00000023999	exd3	99	66.212	Periophthalmus_magnuspinnatus
ENSPREG00000008142	exd3	73	37.311	ENSPMAG00000006135	-	100	37.143	Petromyzon_marinus
ENSPREG00000008142	exd3	98	42.556	ENSPCIG00000006180	-	98	42.556	Phascolarctos_cinereus
ENSPREG00000008142	exd3	100	95.684	ENSPFOG00000019685	exd3	100	95.684	Poecilia_formosa
ENSPREG00000008142	exd3	100	96.178	ENSPLAG00000022290	exd3	100	96.178	Poecilia_latipinna
ENSPREG00000008142	exd3	100	95.960	ENSPMEG00000008007	exd3	100	95.960	Poecilia_mexicana
ENSPREG00000008142	exd3	52	60.000	ENSPCAG00000005094	-	52	60.000	Procavia_capensis
ENSPREG00000008142	exd3	100	73.012	ENSPNYG00000012849	exd3	99	73.012	Pundamilia_nyererei
ENSPREG00000008142	exd3	98	54.971	ENSPNAG00000016753	exd3	99	54.971	Pygocentrus_nattereri
ENSPREG00000008142	exd3	97	39.339	ENSRBIG00000031855	EXD3	96	39.253	Rhinopithecus_bieti
ENSPREG00000008142	exd3	97	39.339	ENSRROG00000040120	EXD3	96	39.367	Rhinopithecus_roxellana
ENSPREG00000008142	exd3	97	38.155	ENSSBOG00000022389	EXD3	91	38.192	Saimiri_boliviensis_boliviensis
ENSPREG00000008142	exd3	91	42.308	ENSSHAG00000001276	-	97	42.308	Sarcophilus_harrisii
ENSPREG00000008142	exd3	99	53.075	ENSSFOG00015023063	exd3	99	51.101	Scleropages_formosus
ENSPREG00000008142	exd3	99	72.624	ENSSMAG00000019809	exd3	98	72.624	Scophthalmus_maximus
ENSPREG00000008142	exd3	100	75.769	ENSSDUG00000006265	exd3	100	75.769	Seriola_dumerili
ENSPREG00000008142	exd3	91	76.132	ENSSLDG00000004671	exd3	99	76.132	Seriola_lalandi_dorsalis
ENSPREG00000008142	exd3	99	75.141	ENSSPAG00000017972	exd3	99	74.916	Stegastes_partitus
ENSPREG00000008142	exd3	92	38.768	ENSSSCG00000005855	EXD3	97	38.647	Sus_scrofa
ENSPREG00000008142	exd3	88	45.607	ENSTGUG00000002494	EXD3	99	45.161	Taeniopygia_guttata
ENSPREG00000008142	exd3	99	66.131	ENSTRUG00000010236	exd3	94	64.057	Takifugu_rubripes
ENSPREG00000008142	exd3	91	64.238	ENSTNIG00000013212	exd3	93	63.833	Tetraodon_nigroviridis
ENSPREG00000008142	exd3	56	46.512	ENSTTRG00000003815	-	57	46.382	Tursiops_truncatus
ENSPREG00000008142	exd3	93	40.335	ENSUAMG00000021470	EXD3	99	40.378	Ursus_americanus
ENSPREG00000008142	exd3	96	39.698	ENSVVUG00000029403	EXD3	92	39.699	Vulpes_vulpes
ENSPREG00000008142	exd3	100	94.581	ENSXMAG00000001467	exd3	100	94.335	Xiphophorus_maculatus