EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000008146 (Gene tree)
Gene ID
103461693
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
19622 bases
Position
chrLG2:32315699-32335320
Accession
103461693
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000011997RRM_1PF00076.223.2e-3112
ENSPREP00000011997RRM_1PF00076.223.2e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000012130RBMS1 (1 of many)-2014027XM_008404011ENSPREP00000011997393 (aa)XP_008402233UPI0004A23041
Gene Model
Click here to download ENSPREG00000008146's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008146's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000008146RBMS18862.857ENSPREG00000015038rbms2a8963.559
ENSPREG00000008146RBMS18966.842ENSPREG00000018221-7780.597
ENSPREG00000008146RBMS19367.024ENSPREG00000011880rbms39469.122
ENSPREG00000008146RBMS17032.099ENSPREG00000017378celf3b7835.294
ENSPREG00000008146RBMS15332.500ENSPREG00000021231celf46139.216
ENSPREG00000008146RBMS18864.286ENSPREG00000020560rbms2b9163.611
ENSPREG00000008146RBMS19966.752ENSPREG00000020161rbms1a9965.985
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000008146RBMS19476.064ENSG00000153250RBMS18393.396Homo_sapiens
ENSPREG00000008146RBMS19967.775ENSAPOG00000013761rbms1a9967.008Acanthochromis_polyacanthus
ENSPREG00000008146RBMS110088.636ENSAPOG00000024437-10086.616Acanthochromis_polyacanthus
ENSPREG00000008146RBMS19474.211ENSAMEG00000012661RBMS19874.211Ailuropoda_melanoleuca
ENSPREG00000008146RBMS19960.358ENSACIG00000000113rbms1a9960.358Amphilophus_citrinellus
ENSPREG00000008146RBMS19886.528ENSACIG00000021498RBMS19786.528Amphilophus_citrinellus
ENSPREG00000008146RBMS19967.775ENSAOCG00000010066rbms1a9967.008Amphiprion_ocellaris
ENSPREG00000008146RBMS110088.354ENSAOCG00000014482-10088.354Amphiprion_ocellaris
ENSPREG00000008146RBMS19967.775ENSAPEG00000023563rbms1a9967.008Amphiprion_percula
ENSPREG00000008146RBMS110088.354ENSAPEG00000018371-10088.354Amphiprion_percula
ENSPREG00000008146RBMS19966.240ENSATEG00000015450rbms1a9965.473Anabas_testudineus
ENSPREG00000008146RBMS110084.810ENSATEG00000018573RBMS110085.063Anabas_testudineus
ENSPREG00000008146RBMS19476.862ENSAPLG00000007282RBMS19476.862Anas_platyrhynchos
ENSPREG00000008146RBMS19776.215ENSACAG00000011984RBMS18273.869Anolis_carolinensis
ENSPREG00000008146RBMS18075.466ENSANAG00000024424RBMS110075.466Aotus_nancymaae
ENSPREG00000008146RBMS19966.496ENSACLG00000021512rbms1a9966.496Astatotilapia_calliptera
ENSPREG00000008146RBMS110086.835ENSACLG00000013048RBMS110086.835Astatotilapia_calliptera
ENSPREG00000008146RBMS110075.505ENSAMXG00000002146rbms1a9973.485Astyanax_mexicanus
ENSPREG00000008146RBMS110078.283ENSAMXG00000009969RBMS110078.283Astyanax_mexicanus
ENSPREG00000008146RBMS19775.064ENSBTAG00000005180RBMS110073.580Bos_taurus
ENSPREG00000008146RBMS19769.948ENSCJAG00000022465-9971.244Callithrix_jacchus
ENSPREG00000008146RBMS19476.064ENSCJAG00000014861-9575.532Callithrix_jacchus
ENSPREG00000008146RBMS19773.196ENSCJAG00000012871-9973.670Callithrix_jacchus
ENSPREG00000008146RBMS19774.807ENSCAFG00000009922RBMS110073.333Canis_familiaris
ENSPREG00000008146RBMS19475.000ENSCAFG00020006120RBMS110070.071Canis_lupus_dingo
ENSPREG00000008146RBMS19475.266ENSCHIG00000023380RBMS19375.266Capra_hircus
ENSPREG00000008146RBMS19476.064ENSTSYG00000005584RBMS19475.568Carlito_syrichta
ENSPREG00000008146RBMS19475.798ENSCPOG00000012310RBMS19972.194Cavia_porcellus
ENSPREG00000008146RBMS19476.064ENSCCAG00000033841RBMS19776.064Cebus_capucinus
ENSPREG00000008146RBMS19476.064ENSCATG00000043032RBMS19876.064Cercocebus_atys
ENSPREG00000008146RBMS19475.532ENSCLAG00000003031RBMS19475.532Chinchilla_lanigera
ENSPREG00000008146RBMS19476.064ENSCSAG00000015687RBMS19376.064Chlorocebus_sabaeus
ENSPREG00000008146RBMS110076.675ENSCPBG00000026455RBMS110076.675Chrysemys_picta_bellii
ENSPREG00000008146RBMS19476.064ENSCANG00000042152RBMS19776.064Colobus_angolensis_palliatus
ENSPREG00000008146RBMS110070.071ENSCGRG00001022833Rbms110070.071Cricetulus_griseus_chok1gshd
ENSPREG00000008146RBMS19475.266ENSCGRG00000008824Rbms19972.194Cricetulus_griseus_crigri
ENSPREG00000008146RBMS110084.131ENSCSEG00000010652RBMS110081.864Cynoglossus_semilaevis
ENSPREG00000008146RBMS19965.985ENSCSEG00000000889rbms1a9965.217Cynoglossus_semilaevis
ENSPREG00000008146RBMS19966.752ENSCVAG00000014698rbms1a9965.729Cyprinodon_variegatus
ENSPREG00000008146RBMS110092.152ENSCVAG00000002027RBMS110091.646Cyprinodon_variegatus
ENSPREG00000008146RBMS110075.377ENSDARG00000074023rbms1a9973.367Danio_rerio
ENSPREG00000008146RBMS18872.826ENSDNOG00000040691RBMS19572.826Dasypus_novemcinctus
ENSPREG00000008146RBMS19475.798ENSDORG00000007103Rbms19475.798Dipodomys_ordii
ENSPREG00000008146RBMS19467.287ENSETEG00000012135RBMS19967.287Echinops_telfairi
ENSPREG00000008146RBMS19774.807ENSEASG00005023132RBMS110073.333Equus_asinus_asinus
ENSPREG00000008146RBMS19475.532ENSECAG00000019894RBMS110070.071Equus_caballus
ENSPREG00000008146RBMS17384.932ENSEEUG00000005628RBMS17284.932Erinaceus_europaeus
ENSPREG00000008146RBMS19671.504ENSELUG00000019328RBMS19471.504Esox_lucius
ENSPREG00000008146RBMS110066.751ENSELUG00000018923rbms1a10067.758Esox_lucius
ENSPREG00000008146RBMS19475.266ENSFCAG00000012524RBMS19474.716Felis_catus
ENSPREG00000008146RBMS18877.273ENSFALG00000004440RBMS19477.273Ficedula_albicollis
ENSPREG00000008146RBMS19774.807ENSFDAG00000015692RBMS19972.194Fukomys_damarensis
ENSPREG00000008146RBMS19966.752ENSFHEG00000005662rbms1a9773.659Fundulus_heteroclitus
ENSPREG00000008146RBMS110091.646ENSFHEG00000000720RBMS110091.899Fundulus_heteroclitus
ENSPREG00000008146RBMS18765.915ENSGMOG00000000525rbms1a9965.915Gadus_morhua
ENSPREG00000008146RBMS19776.350ENSGALG00000011132RBMS19676.350Gallus_gallus
ENSPREG00000008146RBMS110098.219ENSGAFG00000007708RBMS110098.219Gambusia_affinis
ENSPREG00000008146RBMS19264.481ENSGAFG00000011633rbms1a9568.895Gambusia_affinis
ENSPREG00000008146RBMS19164.096ENSGACG00000015174rbms1a9069.470Gasterosteus_aculeatus
ENSPREG00000008146RBMS110084.304ENSGACG00000005671RBMS110084.557Gasterosteus_aculeatus
ENSPREG00000008146RBMS110076.675ENSGAGG00000007866RBMS110076.675Gopherus_agassizii
ENSPREG00000008146RBMS19773.711ENSGGOG00000043756-10072.099Gorilla_gorilla
ENSPREG00000008146RBMS19476.064ENSGGOG00000001264RBMS19776.064Gorilla_gorilla
ENSPREG00000008146RBMS19966.496ENSHBUG00000004802rbms1a9966.496Haplochromis_burtoni
ENSPREG00000008146RBMS19487.903ENSHBUG00000004516RBMS19887.903Haplochromis_burtoni
ENSPREG00000008146RBMS19475.733ENSHGLG00000010387RBMS19872.123Heterocephalus_glaber_female
ENSPREG00000008146RBMS19475.733ENSHGLG00100014105RBMS19872.123Heterocephalus_glaber_male
ENSPREG00000008146RBMS110082.025ENSHCOG00000016668RBMS110082.025Hippocampus_comes
ENSPREG00000008146RBMS19966.240ENSHCOG00000020097rbms1a9965.473Hippocampus_comes
ENSPREG00000008146RBMS110075.253ENSIPUG00000010131RBMS19973.232Ictalurus_punctatus
ENSPREG00000008146RBMS110080.506ENSIPUG00000014677RBMS110080.506Ictalurus_punctatus
ENSPREG00000008146RBMS19476.064ENSSTOG00000012501RBMS19972.449Ictidomys_tridecemlineatus
ENSPREG00000008146RBMS19474.734ENSJJAG00000016543Rbms19374.734Jaculus_jaculus
ENSPREG00000008146RBMS110088.354ENSKMAG00000013911RBMS110088.354Kryptolebias_marmoratus
ENSPREG00000008146RBMS19965.306ENSKMAG00000011839-9964.541Kryptolebias_marmoratus
ENSPREG00000008146RBMS110086.329ENSLBEG00000005787RBMS110086.329Labrus_bergylta
ENSPREG00000008146RBMS19967.008ENSLBEG00000025962rbms1a9966.240Labrus_bergylta
ENSPREG00000008146RBMS110075.682ENSLACG00000004324RBMS19975.682Latimeria_chalumnae
ENSPREG00000008146RBMS110082.025ENSLOCG00000008622rbms1a10082.025Lepisosteus_oculatus
ENSPREG00000008146RBMS19474.734ENSLAFG00000017217RBMS19874.734Loxodonta_africana
ENSPREG00000008146RBMS19476.064ENSMFAG00000000274RBMS19876.064Macaca_fascicularis
ENSPREG00000008146RBMS19774.425ENSMMUG00000016825RBMS19876.064Macaca_mulatta
ENSPREG00000008146RBMS19476.064ENSMNEG00000039425RBMS19876.064Macaca_nemestrina
ENSPREG00000008146RBMS19475.798ENSMLEG00000031517RBMS19875.798Mandrillus_leucophaeus
ENSPREG00000008146RBMS110083.797ENSMAMG00000003159-10083.797Mastacembelus_armatus
ENSPREG00000008146RBMS19965.217ENSMAMG00000005018rbms1a9964.450Mastacembelus_armatus
ENSPREG00000008146RBMS19966.496ENSMZEG00005005661rbms1a9966.496Maylandia_zebra
ENSPREG00000008146RBMS18287.730ENSMZEG00005007313RBMS19187.730Maylandia_zebra
ENSPREG00000008146RBMS18877.841ENSMGAG00000011054RBMS110077.204Meleagris_gallopavo
ENSPREG00000008146RBMS110070.071ENSMAUG00000008550Rbms110070.071Mesocricetus_auratus
ENSPREG00000008146RBMS19475.266ENSMICG00000008325RBMS19875.266Microcebus_murinus
ENSPREG00000008146RBMS110069.596ENSMOCG00000022617Rbms110069.596Microtus_ochrogaster
ENSPREG00000008146RBMS110086.835ENSMMOG00000003707RBMS110086.835Mola_mola
ENSPREG00000008146RBMS19962.660ENSMMOG00000018249rbms1a9961.893Mola_mola
ENSPREG00000008146RBMS19477.128ENSMODG00000005250RBMS19377.128Monodelphis_domestica
ENSPREG00000008146RBMS19682.677ENSMALG00000015715-10083.038Monopterus_albus
ENSPREG00000008146RBMS19966.244ENSMALG00000014235rbms1a9965.482Monopterus_albus
ENSPREG00000008146RBMS110069.359MGP_CAROLIEiJ_G0023586Rbms110069.359Mus_caroli
ENSPREG00000008146RBMS19969.784ENSMUSG00000026970Rbms110069.359Mus_musculus
ENSPREG00000008146RBMS110071.852MGP_PahariEiJ_G0025037Rbms110071.852Mus_pahari
ENSPREG00000008146RBMS19970.024MGP_SPRETEiJ_G0024508Rbms19480.749Mus_spretus
ENSPREG00000008146RBMS19472.194ENSMPUG00000000539RBMS19372.194Mustela_putorius_furo
ENSPREG00000008146RBMS19471.574ENSMLUG00000008762RBMS19471.574Myotis_lucifugus
ENSPREG00000008146RBMS110069.359ENSNGAG00000013636Rbms110069.359Nannospalax_galili
ENSPREG00000008146RBMS18883.046ENSNBRG00000015151RBMS19482.808Neolamprologus_brichardi
ENSPREG00000008146RBMS18866.954ENSNBRG00000020217rbms1a9566.954Neolamprologus_brichardi
ENSPREG00000008146RBMS19476.064ENSNLEG00000001667RBMS19676.064Nomascus_leucogenys
ENSPREG00000008146RBMS18065.528ENSMEUG00000000746RBMS110065.528Notamacropus_eugenii
ENSPREG00000008146RBMS19469.149ENSOPRG00000012431RBMS19369.149Ochotona_princeps
ENSPREG00000008146RBMS19475.000ENSODEG00000013934RBMS19375.000Octodon_degus
ENSPREG00000008146RBMS19965.985ENSONIG00000003329rbms1a9965.985Oreochromis_niloticus
ENSPREG00000008146RBMS110088.101ENSONIG00000008934RBMS110088.101Oreochromis_niloticus
ENSPREG00000008146RBMS15453.689ENSOANG00000004477-9954.098Ornithorhynchus_anatinus
ENSPREG00000008146RBMS19478.191ENSOANG00000006166RBMS19578.191Ornithorhynchus_anatinus
ENSPREG00000008146RBMS19475.532ENSOCUG00000017365RBMS18875.532Oryctolagus_cuniculus
ENSPREG00000008146RBMS19964.213ENSORLG00000003917rbms1a9963.427Oryzias_latipes
ENSPREG00000008146RBMS110080.808ENSORLG00000016818RBMS19982.071Oryzias_latipes
ENSPREG00000008146RBMS110080.808ENSORLG00020022335RBMS19982.071Oryzias_latipes_hni
ENSPREG00000008146RBMS19963.959ENSORLG00020018663rbms1a9963.171Oryzias_latipes_hni
ENSPREG00000008146RBMS19964.194ENSORLG00015016556rbms1a9963.427Oryzias_latipes_hsok
ENSPREG00000008146RBMS110080.808ENSORLG00015018208RBMS19982.071Oryzias_latipes_hsok
ENSPREG00000008146RBMS110082.278ENSOMEG00000002394RBMS19984.051Oryzias_melastigma
ENSPREG00000008146RBMS18875.141ENSOGAG00000002900RBMS19475.141Otolemur_garnettii
ENSPREG00000008146RBMS19475.266ENSOARG00000006870RBMS19375.266Ovis_aries
ENSPREG00000008146RBMS19476.064ENSPPAG00000040083RBMS19876.064Pan_paniscus
ENSPREG00000008146RBMS19473.670ENSPPAG00000036520-9973.670Pan_paniscus
ENSPREG00000008146RBMS19475.266ENSPPRG00000005040RBMS19474.716Panthera_pardus
ENSPREG00000008146RBMS19475.266ENSPTIG00000021240RBMS19474.716Panthera_tigris_altaica
ENSPREG00000008146RBMS19476.064ENSPTRG00000052304RBMS19876.064Pan_troglodytes
ENSPREG00000008146RBMS19473.936ENSPTRG00000039358-9773.936Pan_troglodytes
ENSPREG00000008146RBMS19476.064ENSPANG00000001383RBMS19876.064Papio_anubis
ENSPREG00000008146RBMS110078.086ENSPKIG00000001498rbms1a10076.322Paramormyrops_kingsleyae
ENSPREG00000008146RBMS110074.684ENSPKIG00000012818rbms1a10075.443Paramormyrops_kingsleyae
ENSPREG00000008146RBMS19477.660ENSPSIG00000010240RBMS19576.166Pelodiscus_sinensis
ENSPREG00000008146RBMS18580.060ENSPMGG00000006310RBMS19675.931Periophthalmus_magnuspinnatus
ENSPREG00000008146RBMS19962.404ENSPMGG00000004341rbms1a9962.404Periophthalmus_magnuspinnatus
ENSPREG00000008146RBMS19475.532ENSPEMG00000009449Rbms19575.532Peromyscus_maniculatus_bairdii
ENSPREG00000008146RBMS110074.815ENSPCIG00000018405RBMS110074.815Phascolarctos_cinereus
ENSPREG00000008146RBMS110099.237ENSPFOG00000017483RBMS110099.237Poecilia_formosa
ENSPREG00000008146RBMS19966.752ENSPFOG00000016116rbms1a9965.985Poecilia_formosa
ENSPREG00000008146RBMS19966.752ENSPLAG00000013864rbms1a9965.985Poecilia_latipinna
ENSPREG00000008146RBMS110099.237ENSPLAG00000000920RBMS110099.237Poecilia_latipinna
ENSPREG00000008146RBMS19966.752ENSPMEG00000016185rbms1a9965.985Poecilia_mexicana
ENSPREG00000008146RBMS110099.237ENSPMEG00000015838RBMS110099.237Poecilia_mexicana
ENSPREG00000008146RBMS19472.704ENSPPYG00000012879-9372.704Pongo_abelii
ENSPREG00000008146RBMS19470.479ENSPCAG00000009673RBMS19370.479Procavia_capensis
ENSPREG00000008146RBMS19475.266ENSPCOG00000027294RBMS19474.716Propithecus_coquereli
ENSPREG00000008146RBMS19465.957ENSPVAG00000010429RBMS19365.957Pteropus_vampyrus
ENSPREG00000008146RBMS110087.342ENSPNYG00000002643RBMS110087.342Pundamilia_nyererei
ENSPREG00000008146RBMS18875.575ENSPNAG00000010225rbms1a9872.351Pygocentrus_nattereri
ENSPREG00000008146RBMS110080.303ENSPNAG00000023479RBMS110080.303Pygocentrus_nattereri
ENSPREG00000008146RBMS19374.731ENSRNOG00000008482Rbms19771.173Rattus_norvegicus
ENSPREG00000008146RBMS110070.784ENSRBIG00000044262RBMS19875.597Rhinopithecus_bieti
ENSPREG00000008146RBMS110071.021ENSRROG00000043108RBMS19876.064Rhinopithecus_roxellana
ENSPREG00000008146RBMS19474.346ENSSBOG00000034705RBMS19874.346Saimiri_boliviensis_boliviensis
ENSPREG00000008146RBMS19476.862ENSSHAG00000012271RBMS110072.174Sarcophilus_harrisii
ENSPREG00000008146RBMS18875.862ENSSFOG00015014493rbms1a9575.645Scleropages_formosus
ENSPREG00000008146RBMS110080.253ENSSFOG00015022929rbms110080.253Scleropages_formosus
ENSPREG00000008146RBMS110085.063ENSSMAG00000012152RBMS19684.810Scophthalmus_maximus
ENSPREG00000008146RBMS18768.605ENSSMAG00000012722rbms1a9568.605Scophthalmus_maximus
ENSPREG00000008146RBMS110087.595ENSSDUG00000018803RBMS110087.595Seriola_dumerili
ENSPREG00000008146RBMS19967.263ENSSDUG00000020602rbms1a9966.496Seriola_dumerili
ENSPREG00000008146RBMS19967.263ENSSLDG00000009495rbms1a9966.496Seriola_lalandi_dorsalis
ENSPREG00000008146RBMS110087.848ENSSLDG00000016556RBMS110087.848Seriola_lalandi_dorsalis
ENSPREG00000008146RBMS18158.333ENSSARG00000011085RBMS18058.333Sorex_araneus
ENSPREG00000008146RBMS18878.125ENSSPUG00000017163RBMS19478.125Sphenodon_punctatus
ENSPREG00000008146RBMS19967.519ENSSPAG00000005371rbms1a9966.752Stegastes_partitus
ENSPREG00000008146RBMS110089.114ENSSPAG00000000059RBMS110089.114Stegastes_partitus
ENSPREG00000008146RBMS19772.751ENSSSCG00000015888RBMS110072.840Sus_scrofa
ENSPREG00000008146RBMS19477.128ENSTGUG00000006606RBMS19377.128Taeniopygia_guttata
ENSPREG00000008146RBMS110082.620ENSTRUG00000005466-10081.108Takifugu_rubripes
ENSPREG00000008146RBMS19964.721ENSTRUG00000017155rbms1a9963.959Takifugu_rubripes
ENSPREG00000008146RBMS19483.065ENSTNIG00000016496RBMS19785.632Tetraodon_nigroviridis
ENSPREG00000008146RBMS19064.326ENSTNIG00000009477rbms1a9864.577Tetraodon_nigroviridis
ENSPREG00000008146RBMS19468.883ENSTBEG00000016156RBMS19968.883Tupaia_belangeri
ENSPREG00000008146RBMS19475.532ENSTTRG00000011058RBMS19975.532Tursiops_truncatus
ENSPREG00000008146RBMS19475.266ENSUAMG00000022331RBMS19375.266Ursus_americanus
ENSPREG00000008146RBMS19475.266ENSUMAG00000008605RBMS19775.266Ursus_maritimus
ENSPREG00000008146RBMS18877.778ENSVPAG00000002716RBMS19377.778Vicugna_pacos
ENSPREG00000008146RBMS19471.939ENSVVUG00000018682RBMS19475.000Vulpes_vulpes
ENSPREG00000008146RBMS19470.822ENSXETG00000016204rbms19571.549Xenopus_tropicalis
ENSPREG00000008146RBMS19963.939ENSXCOG00000001659rbms1a9963.171Xiphophorus_couchianus
ENSPREG00000008146RBMS19398.093ENSXCOG00000000211RBMS110098.093Xiphophorus_couchianus
ENSPREG00000008146RBMS19966.496ENSXMAG00000001802rbms1a9965.729Xiphophorus_maculatus
ENSPREG00000008146RBMS110098.219ENSXMAG00000011405RBMS110098.219Xiphophorus_maculatus

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