EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008171 (Gene tree)
Gene ID: 103465816
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 12290 bases
Position: chrLG6:6198327-6210616
Accession: 103465816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012068	RRM_1	PF00076.22	6.5e-05	1	1
ENSPREP00000012043	RRM_1	PF00076.22	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012176	-	6880	XM_008410985	ENSPREP00000012043	800 (aa)	XP_008409207	UPI0004A4CC6E
ENSPRET00000012201	-	2193	-	ENSPREP00000012068	730 (aa)	-	-

Gene Model

Click here to download ENSPREG00000008171's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008171	cnot4a	100	70.817	ENSG00000080802	CNOT4	97	82.506	Homo_sapiens
ENSPREG00000008171	cnot4a	94	96.043	ENSAPOG00000016272	cnot4a	98	99.259	Acanthochromis_polyacanthus
ENSPREG00000008171	cnot4a	93	88.372	ENSAMEG00000012081	CNOT4	91	88.372	Ailuropoda_melanoleuca
ENSPREG00000008171	cnot4a	100	96.043	ENSACIG00000003011	cnot4a	100	91.905	Amphilophus_citrinellus
ENSPREG00000008171	cnot4a	100	95.683	ENSAOCG00000010792	cnot4a	100	98.889	Amphiprion_ocellaris
ENSPREG00000008171	cnot4a	100	95.683	ENSAPEG00000004680	cnot4a	100	98.889	Amphiprion_percula
ENSPREG00000008171	cnot4a	100	95.683	ENSATEG00000017580	cnot4a	100	98.889	Anabas_testudineus
ENSPREG00000008171	cnot4a	100	69.118	ENSAPLG00000016441	CNOT4	100	68.995	Anas_platyrhynchos
ENSPREG00000008171	cnot4a	100	68.589	ENSACAG00000011154	CNOT4	100	68.466	Anolis_carolinensis
ENSPREG00000008171	cnot4a	100	70.683	ENSANAG00000032156	CNOT4	99	81.250	Aotus_nancymaae
ENSPREG00000008171	cnot4a	100	96.043	ENSACLG00000002514	cnot4a	100	99.259	Astatotilapia_calliptera
ENSPREG00000008171	cnot4a	100	87.857	ENSAMXG00000011473	cnot4b	100	91.852	Astyanax_mexicanus
ENSPREG00000008171	cnot4a	85	95.185	ENSAMXG00000001373	cnot4a	100	95.185	Astyanax_mexicanus
ENSPREG00000008171	cnot4a	100	70.722	ENSBTAG00000017919	CNOT4	100	71.891	Bos_taurus
ENSPREG00000008171	cnot4a	100	70.683	ENSCJAG00000012532	CNOT4	99	81.250	Callithrix_jacchus
ENSPREG00000008171	cnot4a	100	70.683	ENSCAFG00000003223	CNOT4	100	72.061	Canis_familiaris
ENSPREG00000008171	cnot4a	97	71.721	ENSCAFG00020000093	CNOT4	100	71.721	Canis_lupus_dingo
ENSPREG00000008171	cnot4a	100	70.856	ENSCHIG00000010955	CNOT4	100	71.721	Capra_hircus
ENSPREG00000008171	cnot4a	100	70.281	ENSTSYG00000000893	CNOT4	99	80.920	Carlito_syrichta
ENSPREG00000008171	cnot4a	91	90.189	ENSCAPG00000006213	CNOT4	99	90.189	Cavia_aperea
ENSPREG00000008171	cnot4a	100	70.281	ENSCPOG00000011526	CNOT4	100	71.721	Cavia_porcellus
ENSPREG00000008171	cnot4a	100	70.950	ENSCCAG00000024414	CNOT4	94	94.323	Cebus_capucinus
ENSPREG00000008171	cnot4a	100	70.817	ENSCATG00000022607	CNOT4	97	82.270	Cercocebus_atys
ENSPREG00000008171	cnot4a	100	70.281	ENSCLAG00000001857	CNOT4	100	71.380	Chinchilla_lanigera
ENSPREG00000008171	cnot4a	100	70.549	ENSCSAG00000009096	CNOT4	100	70.817	Chlorocebus_sabaeus
ENSPREG00000008171	cnot4a	67	91.444	ENSCHOG00000010412	CNOT4	67	93.583	Choloepus_hoffmanni
ENSPREG00000008171	cnot4a	100	72.193	ENSCPBG00000004959	CNOT4	100	71.925	Chrysemys_picta_bellii
ENSPREG00000008171	cnot4a	67	67.480	ENSCING00000004364	-	52	67.480	Ciona_intestinalis
ENSPREG00000008171	cnot4a	100	70.950	ENSCANG00000029319	CNOT4	97	82.270	Colobus_angolensis_palliatus
ENSPREG00000008171	cnot4a	100	69.880	ENSCGRG00001014651	Cnot4	100	71.550	Cricetulus_griseus_chok1gshd
ENSPREG00000008171	cnot4a	100	69.880	ENSCGRG00000005727	Cnot4	100	71.550	Cricetulus_griseus_crigri
ENSPREG00000008171	cnot4a	95	96.043	ENSCSEG00000015080	cnot4a	94	99.259	Cynoglossus_semilaevis
ENSPREG00000008171	cnot4a	100	95.683	ENSCVAG00000009399	cnot4a	100	98.168	Cyprinodon_variegatus
ENSPREG00000008171	cnot4a	99	90.370	ENSDARG00000007639	cnot4b	91	90.370	Danio_rerio
ENSPREG00000008171	cnot4a	100	76.580	ENSDARG00000007045	cnot4a	100	77.323	Danio_rerio
ENSPREG00000008171	cnot4a	100	70.643	ENSDNOG00000009409	CNOT4	100	70.912	Dasypus_novemcinctus
ENSPREG00000008171	cnot4a	100	71.486	ENSDORG00000012268	Cnot4	100	72.402	Dipodomys_ordii
ENSPREG00000008171	cnot4a	96	69.124	ENSETEG00000013407	CNOT4	94	67.426	Echinops_telfairi
ENSPREG00000008171	cnot4a	97	71.891	ENSEASG00005014430	CNOT4	100	71.891	Equus_asinus_asinus
ENSPREG00000008171	cnot4a	100	70.950	ENSECAG00000020262	CNOT4	100	71.891	Equus_caballus
ENSPREG00000008171	cnot4a	99	93.382	ENSELUG00000008742	cnot4a	100	94.834	Esox_lucius
ENSPREG00000008171	cnot4a	96	88.603	ENSELUG00000011540	cnot4b	95	90.037	Esox_lucius
ENSPREG00000008171	cnot4a	100	70.683	ENSFCAG00000011904	CNOT4	96	82.578	Felis_catus
ENSPREG00000008171	cnot4a	100	69.363	ENSFALG00000011194	CNOT4	100	69.118	Ficedula_albicollis
ENSPREG00000008171	cnot4a	100	70.549	ENSFDAG00000013525	CNOT4	100	71.891	Fukomys_damarensis
ENSPREG00000008171	cnot4a	100	96.403	ENSFHEG00000006608	cnot4a	100	97.842	Fundulus_heteroclitus
ENSPREG00000008171	cnot4a	96	75.503	ENSGMOG00000001329	cnot4a	100	76.322	Gadus_morhua
ENSPREG00000008171	cnot4a	100	71.658	ENSGALG00000011682	CNOT4	100	71.390	Gallus_gallus
ENSPREG00000008171	cnot4a	100	95.683	ENSGACG00000004276	cnot4a	100	98.889	Gasterosteus_aculeatus
ENSPREG00000008171	cnot4a	91	89.299	ENSGAGG00000017331	CNOT4	99	89.299	Gopherus_agassizii
ENSPREG00000008171	cnot4a	96	67.403	ENSGGOG00000000142	CNOT4	97	82.466	Gorilla_gorilla
ENSPREG00000008171	cnot4a	100	96.043	ENSHBUG00000000027	cnot4a	100	99.259	Haplochromis_burtoni
ENSPREG00000008171	cnot4a	100	70.415	ENSHGLG00000011533	CNOT4	100	71.891	Heterocephalus_glaber_female
ENSPREG00000008171	cnot4a	74	73.882	ENSHGLG00100013058	CNOT4	94	74.061	Heterocephalus_glaber_male
ENSPREG00000008171	cnot4a	99	94.245	ENSHCOG00000015815	cnot4a	100	97.407	Hippocampus_comes
ENSPREG00000008171	cnot4a	99	90.000	ENSIPUG00000016994	cnot4b	100	91.481	Ictalurus_punctatus
ENSPREG00000008171	cnot4a	99	92.989	ENSIPUG00000006393	cnot4	100	87.459	Ictalurus_punctatus
ENSPREG00000008171	cnot4a	100	70.415	ENSSTOG00000007717	CNOT4	100	71.721	Ictidomys_tridecemlineatus
ENSPREG00000008171	cnot4a	67	87.925	ENSJJAG00000019991	-	93	87.925	Jaculus_jaculus
ENSPREG00000008171	cnot4a	100	69.880	ENSJJAG00000016618	Cnot4	100	71.550	Jaculus_jaculus
ENSPREG00000008171	cnot4a	92	97.802	ENSKMAG00000004581	cnot4a	100	97.802	Kryptolebias_marmoratus
ENSPREG00000008171	cnot4a	100	96.043	ENSLBEG00000009999	cnot4a	100	92.500	Labrus_bergylta
ENSPREG00000008171	cnot4a	100	69.448	ENSLACG00000002647	CNOT4	99	70.229	Latimeria_chalumnae
ENSPREG00000008171	cnot4a	99	90.775	ENSLOCG00000016126	cnot4a	91	90.775	Lepisosteus_oculatus
ENSPREG00000008171	cnot4a	100	71.257	ENSLAFG00000000709	CNOT4	100	71.524	Loxodonta_africana
ENSPREG00000008171	cnot4a	100	70.549	ENSMFAG00000046349	CNOT4	97	82.270	Macaca_fascicularis
ENSPREG00000008171	cnot4a	100	70.817	ENSMMUG00000016181	CNOT4	97	82.270	Macaca_mulatta
ENSPREG00000008171	cnot4a	100	70.817	ENSMNEG00000042164	CNOT4	97	82.270	Macaca_nemestrina
ENSPREG00000008171	cnot4a	100	70.817	ENSMLEG00000032709	CNOT4	97	82.270	Mandrillus_leucophaeus
ENSPREG00000008171	cnot4a	100	96.043	ENSMAMG00000023194	cnot4a	100	92.643	Mastacembelus_armatus
ENSPREG00000008171	cnot4a	100	96.043	ENSMZEG00005007312	cnot4a	100	93.333	Maylandia_zebra
ENSPREG00000008171	cnot4a	100	68.873	ENSMGAG00000011788	CNOT4	100	68.627	Meleagris_gallopavo
ENSPREG00000008171	cnot4a	100	70.281	ENSMAUG00000020415	Cnot4	100	71.721	Mesocricetus_auratus
ENSPREG00000008171	cnot4a	100	70.950	ENSMICG00000001667	CNOT4	100	82.284	Microcebus_murinus
ENSPREG00000008171	cnot4a	91	90.566	ENSMOCG00000020955	Cnot4	99	90.566	Microtus_ochrogaster
ENSPREG00000008171	cnot4a	81	98.148	ENSMMOG00000014565	cnot4a	95	98.148	Mola_mola
ENSPREG00000008171	cnot4a	100	70.817	ENSMODG00000014068	CNOT4	100	70.549	Monodelphis_domestica
ENSPREG00000008171	cnot4a	93	95.683	ENSMALG00000011662	cnot4a	89	91.368	Monopterus_albus
ENSPREG00000008171	cnot4a	100	69.559	MGP_CAROLIEiJ_G0028217	Cnot4	100	71.307	Mus_caroli
ENSPREG00000008171	cnot4a	100	69.880	ENSMUSG00000038784	Cnot4	100	71.550	Mus_musculus
ENSPREG00000008171	cnot4a	100	69.612	MGP_PahariEiJ_G0021974	Cnot4	100	71.380	Mus_pahari
ENSPREG00000008171	cnot4a	100	69.880	MGP_SPRETEiJ_G0029216	Cnot4	100	71.550	Mus_spretus
ENSPREG00000008171	cnot4a	100	70.683	ENSMPUG00000004089	CNOT4	100	70.950	Mustela_putorius_furo
ENSPREG00000008171	cnot4a	97	71.891	ENSMLUG00000008260	CNOT4	100	71.891	Myotis_lucifugus
ENSPREG00000008171	cnot4a	100	70.227	ENSNGAG00000015030	Cnot4	100	71.647	Nannospalax_galili
ENSPREG00000008171	cnot4a	92	88.393	ENSNBRG00000021144	cnot4a	100	93.333	Neolamprologus_brichardi
ENSPREG00000008171	cnot4a	100	70.683	ENSNLEG00000013352	CNOT4	97	82.270	Nomascus_leucogenys
ENSPREG00000008171	cnot4a	84	88.889	ENSOPRG00000001023	CNOT4	71	98.131	Ochotona_princeps
ENSPREG00000008171	cnot4a	100	70.281	ENSODEG00000012975	CNOT4	100	71.721	Octodon_degus
ENSPREG00000008171	cnot4a	100	96.043	ENSONIG00000008656	cnot4a	100	93.017	Oreochromis_niloticus
ENSPREG00000008171	cnot4a	100	71.562	ENSOANG00000005006	CNOT4	100	71.295	Ornithorhynchus_anatinus
ENSPREG00000008171	cnot4a	100	70.683	ENSOCUG00000013448	CNOT4	100	70.950	Oryctolagus_cuniculus
ENSPREG00000008171	cnot4a	100	95.683	ENSORLG00000003727	cnot4a	100	98.168	Oryzias_latipes
ENSPREG00000008171	cnot4a	100	95.683	ENSORLG00020015684	cnot4a	100	98.168	Oryzias_latipes_hni
ENSPREG00000008171	cnot4a	100	95.683	ENSORLG00015008470	cnot4a	100	98.168	Oryzias_latipes_hsok
ENSPREG00000008171	cnot4a	100	96.043	ENSOMEG00000011084	cnot4a	100	98.535	Oryzias_melastigma
ENSPREG00000008171	cnot4a	100	70.817	ENSOGAG00000015499	CNOT4	100	71.084	Otolemur_garnettii
ENSPREG00000008171	cnot4a	100	70.817	ENSOARG00000008803	CNOT4	100	71.084	Ovis_aries
ENSPREG00000008171	cnot4a	100	70.817	ENSPPAG00000041937	CNOT4	97	82.506	Pan_paniscus
ENSPREG00000008171	cnot4a	100	70.950	ENSPPRG00000023940	CNOT4	100	72.061	Panthera_pardus
ENSPREG00000008171	cnot4a	100	70.549	ENSPTIG00000016601	CNOT4	96	82.578	Panthera_tigris_altaica
ENSPREG00000008171	cnot4a	100	70.683	ENSPTRG00000019727	CNOT4	97	82.270	Pan_troglodytes
ENSPREG00000008171	cnot4a	100	70.950	ENSPANG00000017724	CNOT4	97	82.270	Papio_anubis
ENSPREG00000008171	cnot4a	87	89.630	ENSPKIG00000018137	cnot4a	100	89.630	Paramormyrops_kingsleyae
ENSPREG00000008171	cnot4a	100	69.155	ENSPSIG00000011256	CNOT4	100	68.911	Pelodiscus_sinensis
ENSPREG00000008171	cnot4a	86	96.667	ENSPMGG00000005671	cnot4a	100	96.667	Periophthalmus_magnuspinnatus
ENSPREG00000008171	cnot4a	100	69.880	ENSPEMG00000021566	Cnot4	100	71.550	Peromyscus_maniculatus_bairdii
ENSPREG00000008171	cnot4a	100	70.494	ENSPCIG00000029622	CNOT4	96	70.227	Phascolarctos_cinereus
ENSPREG00000008171	cnot4a	100	99.252	ENSPFOG00000002228	cnot4a	100	99.252	Poecilia_formosa
ENSPREG00000008171	cnot4a	100	99.377	ENSPLAG00000001780	cnot4a	100	99.377	Poecilia_latipinna
ENSPREG00000008171	cnot4a	100	98.878	ENSPMEG00000006852	cnot4a	100	99.267	Poecilia_mexicana
ENSPREG00000008171	cnot4a	100	70.415	ENSPPYG00000018026	CNOT4	100	70.683	Pongo_abelii
ENSPREG00000008171	cnot4a	100	70.549	ENSPCOG00000019907	CNOT4	100	82.284	Propithecus_coquereli
ENSPREG00000008171	cnot4a	93	70.977	ENSPVAG00000004905	CNOT4	92	69.012	Pteropus_vampyrus
ENSPREG00000008171	cnot4a	100	96.043	ENSPNYG00000004276	cnot4a	100	93.333	Pundamilia_nyererei
ENSPREG00000008171	cnot4a	92	94.444	ENSPNAG00000020433	cnot4a	100	94.444	Pygocentrus_nattereri
ENSPREG00000008171	cnot4a	99	90.741	ENSPNAG00000008679	cnot4b	100	92.222	Pygocentrus_nattereri
ENSPREG00000008171	cnot4a	100	69.344	ENSRNOG00000010795	Cnot4	100	70.013	Rattus_norvegicus
ENSPREG00000008171	cnot4a	100	70.817	ENSRBIG00000043977	CNOT4	97	82.270	Rhinopithecus_bieti
ENSPREG00000008171	cnot4a	100	70.817	ENSSBOG00000020808	CNOT4	99	81.481	Saimiri_boliviensis_boliviensis
ENSPREG00000008171	cnot4a	100	71.084	ENSSHAG00000013639	CNOT4	100	70.817	Sarcophilus_harrisii
ENSPREG00000008171	cnot4a	88	91.538	ENSSFOG00015002019	cnot4a	100	91.111	Scleropages_formosus
ENSPREG00000008171	cnot4a	90	92.674	ENSSFOG00015017285	CNOT4	100	92.674	Scleropages_formosus
ENSPREG00000008171	cnot4a	100	96.043	ENSSMAG00000008614	cnot4a	100	99.262	Scophthalmus_maximus
ENSPREG00000008171	cnot4a	82	93.284	ENSSDUG00000018585	cnot4b	99	93.284	Seriola_dumerili
ENSPREG00000008171	cnot4a	100	96.043	ENSSDUG00000022635	cnot4a	100	99.259	Seriola_dumerili
ENSPREG00000008171	cnot4a	100	62.027	ENSSLDG00000014347	cnot4b	100	62.165	Seriola_lalandi_dorsalis
ENSPREG00000008171	cnot4a	100	96.043	ENSSLDG00000015770	cnot4a	100	93.508	Seriola_lalandi_dorsalis
ENSPREG00000008171	cnot4a	89	88.321	ENSSPUG00000004677	CNOT4	100	88.321	Sphenodon_punctatus
ENSPREG00000008171	cnot4a	100	96.043	ENSSPAG00000012329	cnot4a	100	99.259	Stegastes_partitus
ENSPREG00000008171	cnot4a	100	70.683	ENSSSCG00000021354	CNOT4	100	72.061	Sus_scrofa
ENSPREG00000008171	cnot4a	100	69.240	ENSTGUG00000009161	CNOT4	100	69.118	Taeniopygia_guttata
ENSPREG00000008171	cnot4a	100	94.964	ENSTRUG00000016861	cnot4a	100	98.148	Takifugu_rubripes
ENSPREG00000008171	cnot4a	100	86.785	ENSTNIG00000016000	cnot4a	99	91.513	Tetraodon_nigroviridis
ENSPREG00000008171	cnot4a	93	66.906	ENSTBEG00000002202	CNOT4	88	65.647	Tupaia_belangeri
ENSPREG00000008171	cnot4a	93	71.960	ENSTTRG00000005122	CNOT4	90	70.977	Tursiops_truncatus
ENSPREG00000008171	cnot4a	97	72.061	ENSUAMG00000026759	CNOT4	100	72.061	Ursus_americanus
ENSPREG00000008171	cnot4a	99	70.929	ENSUMAG00000015351	CNOT4	94	74.240	Ursus_maritimus
ENSPREG00000008171	cnot4a	100	70.950	ENSVVUG00000006200	CNOT4	100	71.721	Vulpes_vulpes
ENSPREG00000008171	cnot4a	97	87.319	ENSXETG00000010594	cnot4	90	87.319	Xenopus_tropicalis
ENSPREG00000008171	cnot4a	85	94.410	ENSXCOG00000020824	cnot4a	98	94.410	Xiphophorus_couchianus
ENSPREG00000008171	cnot4a	100	98.625	ENSXMAG00000016984	cnot4a	100	98.625	Xiphophorus_maculatus