EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008424 (Gene tree)
Gene ID: 103464396
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 25285 bases
Position: chrLG5:8403960-8429244
Accession: 103464396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012623	R3H	PF01424.22	8.8e-11	1	1
ENSPREP00000012496	R3H	PF01424.22	9.3e-11	1	1
ENSPREP00000012574	R3H	PF01424.22	9.7e-11	1	1
ENSPREP00000012548	R3H	PF01424.22	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012707	-	3435	XM_017304915	ENSPREP00000012574	1022 (aa)	XP_017160404	-
ENSPRET00000012629	-	3588	XM_008408455	ENSPREP00000012496	1073 (aa)	XP_008406677	UPI0004A3F2BD
ENSPRET00000012756	-	2754	-	ENSPREP00000012623	917 (aa)	-	-
ENSPRET00000012681	-	3534	XM_017304912	ENSPREP00000012548	1055 (aa)	XP_017160401	UPI0007EBD569

Gene Model

Click here to download ENSPREG00000008424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008424	r3hdm2	74	58.876	ENSPREG00000007902	r3hdm1	78	63.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008424	r3hdm2	100	65.241	ENSG00000179912	R3HDM2	89	80.723	Homo_sapiens
ENSPREG00000008424	r3hdm2	51	40.215	ENSAPOG00000021873	-	73	39.051	Acanthochromis_polyacanthus
ENSPREG00000008424	r3hdm2	100	91.328	ENSAPOG00000020341	r3hdm2	100	92.052	Acanthochromis_polyacanthus
ENSPREG00000008424	r3hdm2	95	66.699	ENSAMEG00000004812	R3HDM2	99	63.978	Ailuropoda_melanoleuca
ENSPREG00000008424	r3hdm2	99	88.126	ENSACIG00000016146	r3hdm2	98	86.601	Amphilophus_citrinellus
ENSPREG00000008424	r3hdm2	100	91.421	ENSAOCG00000023694	r3hdm2	100	92.329	Amphiprion_ocellaris
ENSPREG00000008424	r3hdm2	100	91.370	ENSAPEG00000008851	r3hdm2	100	92.293	Amphiprion_percula
ENSPREG00000008424	r3hdm2	100	89.469	ENSATEG00000025024	r3hdm2	100	91.259	Anabas_testudineus
ENSPREG00000008424	r3hdm2	100	55.480	ENSAPLG00000004298	R3HDM2	93	66.513	Anas_platyrhynchos
ENSPREG00000008424	r3hdm2	99	62.275	ENSACAG00000006388	R3HDM2	99	61.517	Anolis_carolinensis
ENSPREG00000008424	r3hdm2	100	59.916	ENSANAG00000031310	-	98	61.738	Aotus_nancymaae
ENSPREG00000008424	r3hdm2	100	65.134	ENSANAG00000025397	-	99	64.820	Aotus_nancymaae
ENSPREG00000008424	r3hdm2	100	91.541	ENSACLG00000019106	r3hdm2	100	91.902	Astatotilapia_calliptera
ENSPREG00000008424	r3hdm2	100	70.961	ENSAMXG00000017180	r3hdm2	99	73.130	Astyanax_mexicanus
ENSPREG00000008424	r3hdm2	99	64.431	ENSBTAG00000018361	R3HDM2	99	64.431	Bos_taurus
ENSPREG00000008424	r3hdm2	100	64.787	ENSCJAG00000007365	R3HDM2	99	64.723	Callithrix_jacchus
ENSPREG00000008424	r3hdm2	100	62.784	ENSCAFG00000000215	R3HDM2	99	64.541	Canis_familiaris
ENSPREG00000008424	r3hdm2	100	64.920	ENSCAFG00020023713	R3HDM2	99	64.852	Canis_lupus_dingo
ENSPREG00000008424	r3hdm2	100	63.037	ENSCHIG00000014022	R3HDM2	99	64.820	Capra_hircus
ENSPREG00000008424	r3hdm2	100	64.385	ENSTSYG00000001449	R3HDM2	99	64.626	Carlito_syrichta
ENSPREG00000008424	r3hdm2	99	65.989	ENSCPOG00000009217	R3HDM2	99	63.871	Cavia_porcellus
ENSPREG00000008424	r3hdm2	87	65.380	ENSCCAG00000026083	R3HDM2	99	65.854	Cebus_capucinus
ENSPREG00000008424	r3hdm2	100	65.027	ENSCATG00000036929	R3HDM2	99	64.723	Cercocebus_atys
ENSPREG00000008424	r3hdm2	99	65.928	ENSCLAG00000011997	R3HDM2	99	65.250	Chinchilla_lanigera
ENSPREG00000008424	r3hdm2	99	65.262	ENSCSAG00000004911	R3HDM2	99	64.789	Chlorocebus_sabaeus
ENSPREG00000008424	r3hdm2	73	66.004	ENSCHOG00000005636	R3HDM2	89	67.262	Choloepus_hoffmanni
ENSPREG00000008424	r3hdm2	95	65.250	ENSCPBG00000013922	R3HDM2	99	62.443	Chrysemys_picta_bellii
ENSPREG00000008424	r3hdm2	100	63.830	ENSCANG00000043807	R3HDM2	99	64.529	Colobus_angolensis_palliatus
ENSPREG00000008424	r3hdm2	99	63.444	ENSCGRG00001017324	R3hdm2	99	62.511	Cricetulus_griseus_chok1gshd
ENSPREG00000008424	r3hdm2	99	63.444	ENSCGRG00000003862	R3hdm2	99	62.511	Cricetulus_griseus_crigri
ENSPREG00000008424	r3hdm2	100	89.610	ENSCSEG00000010925	r3hdm2	100	89.425	Cynoglossus_semilaevis
ENSPREG00000008424	r3hdm2	100	96.209	ENSCVAG00000009058	r3hdm2	100	96.209	Cyprinodon_variegatus
ENSPREG00000008424	r3hdm2	99	68.187	ENSDARG00000102610	r3hdm2	99	74.383	Danio_rerio
ENSPREG00000008424	r3hdm2	99	64.332	ENSDNOG00000015033	R3HDM2	100	65.414	Dasypus_novemcinctus
ENSPREG00000008424	r3hdm2	100	62.004	ENSDORG00000011462	R3hdm2	99	62.791	Dipodomys_ordii
ENSPREG00000008424	r3hdm2	100	62.810	ENSEASG00005007091	R3HDM2	99	65.125	Equus_asinus_asinus
ENSPREG00000008424	r3hdm2	99	64.733	ENSECAG00000003157	R3HDM2	99	65.032	Equus_caballus
ENSPREG00000008424	r3hdm2	100	78.344	ENSELUG00000015969	r3hdm2	100	77.261	Esox_lucius
ENSPREG00000008424	r3hdm2	100	64.599	ENSFCAG00000000192	R3HDM2	98	63.868	Felis_catus
ENSPREG00000008424	r3hdm2	81	63.254	ENSFALG00000000255	R3HDM2	99	59.611	Ficedula_albicollis
ENSPREG00000008424	r3hdm2	100	62.307	ENSFDAG00000019385	R3HDM2	99	64.299	Fukomys_damarensis
ENSPREG00000008424	r3hdm2	100	97.111	ENSFHEG00000016484	r3hdm2	100	97.111	Fundulus_heteroclitus
ENSPREG00000008424	r3hdm2	95	81.641	ENSGMOG00000007961	r3hdm2	100	81.738	Gadus_morhua
ENSPREG00000008424	r3hdm2	99	64.378	ENSGALG00000043736	R3HDM2	99	62.891	Gallus_gallus
ENSPREG00000008424	r3hdm2	100	98.602	ENSGAFG00000013887	r3hdm2	100	98.602	Gambusia_affinis
ENSPREG00000008424	r3hdm2	95	89.366	ENSGACG00000006442	r3hdm2	100	89.268	Gasterosteus_aculeatus
ENSPREG00000008424	r3hdm2	100	60.161	ENSGAGG00000017797	R3HDM2	99	61.290	Gopherus_agassizii
ENSPREG00000008424	r3hdm2	100	65.027	ENSGGOG00000015007	R3HDM2	99	64.723	Gorilla_gorilla
ENSPREG00000008424	r3hdm2	94	58.371	ENSHGLG00000010421	-	97	58.894	Heterocephalus_glaber_female
ENSPREG00000008424	r3hdm2	99	65.250	ENSHGLG00000010434	-	99	64.385	Heterocephalus_glaber_female
ENSPREG00000008424	r3hdm2	97	57.033	ENSHGLG00100018871	-	96	58.193	Heterocephalus_glaber_male
ENSPREG00000008424	r3hdm2	99	65.157	ENSHGLG00100004183	-	99	64.292	Heterocephalus_glaber_male
ENSPREG00000008424	r3hdm2	100	86.654	ENSHCOG00000001142	r3hdm2	97	86.919	Hippocampus_comes
ENSPREG00000008424	r3hdm2	100	76.103	ENSIPUG00000023873	r3hdm2	100	76.379	Ictalurus_punctatus
ENSPREG00000008424	r3hdm2	100	62.632	ENSSTOG00000013424	R3HDM2	99	60.777	Ictidomys_tridecemlineatus
ENSPREG00000008424	r3hdm2	99	64.662	ENSJJAG00000010001	R3hdm2	99	64.444	Jaculus_jaculus
ENSPREG00000008424	r3hdm2	52	36.780	ENSKMAG00000004052	-	70	38.386	Kryptolebias_marmoratus
ENSPREG00000008424	r3hdm2	100	91.959	ENSKMAG00000012695	r3hdm2	97	92.115	Kryptolebias_marmoratus
ENSPREG00000008424	r3hdm2	100	90.538	ENSLBEG00000013115	r3hdm2	96	90.251	Labrus_bergylta
ENSPREG00000008424	r3hdm2	51	38.918	ENSLBEG00000002779	-	52	47.181	Labrus_bergylta
ENSPREG00000008424	r3hdm2	95	66.215	ENSLACG00000019064	r3hdm2	100	64.791	Latimeria_chalumnae
ENSPREG00000008424	r3hdm2	99	73.883	ENSLOCG00000005976	r3hdm2	99	73.398	Lepisosteus_oculatus
ENSPREG00000008424	r3hdm2	99	66.017	ENSLAFG00000006510	R3HDM2	99	65.799	Loxodonta_africana
ENSPREG00000008424	r3hdm2	100	65.027	ENSMFAG00000036385	R3HDM2	99	64.723	Macaca_fascicularis
ENSPREG00000008424	r3hdm2	100	65.027	ENSMMUG00000021789	R3HDM2	99	65.217	Macaca_mulatta
ENSPREG00000008424	r3hdm2	100	65.171	ENSMNEG00000025314	R3HDM2	99	64.723	Macaca_nemestrina
ENSPREG00000008424	r3hdm2	100	65.134	ENSMLEG00000028915	R3HDM2	99	64.820	Mandrillus_leucophaeus
ENSPREG00000008424	r3hdm2	100	91.829	ENSMAMG00000009793	r3hdm2	100	91.759	Mastacembelus_armatus
ENSPREG00000008424	r3hdm2	100	91.128	ENSMZEG00005007319	r3hdm2	100	91.481	Maylandia_zebra
ENSPREG00000008424	r3hdm2	100	64.750	ENSMICG00000012389	R3HDM2	99	64.341	Microcebus_murinus
ENSPREG00000008424	r3hdm2	99	64.107	ENSMOCG00000014425	R3hdm2	99	63.318	Microtus_ochrogaster
ENSPREG00000008424	r3hdm2	100	83.139	ENSMMOG00000007448	r3hdm2	99	83.608	Mola_mola
ENSPREG00000008424	r3hdm2	95	78.660	ENSMALG00000010211	r3hdm2	98	85.866	Monopterus_albus
ENSPREG00000008424	r3hdm2	100	62.029	MGP_CAROLIEiJ_G0015896	R3hdm2	99	63.956	Mus_caroli
ENSPREG00000008424	r3hdm2	99	64.635	ENSMUSG00000025404	R3hdm2	99	64.200	Mus_musculus
ENSPREG00000008424	r3hdm2	100	61.777	MGP_PahariEiJ_G0031189	R3hdm2	99	64.200	Mus_pahari
ENSPREG00000008424	r3hdm2	99	64.608	MGP_SPRETEiJ_G0016722	R3hdm2	99	63.897	Mus_spretus
ENSPREG00000008424	r3hdm2	97	64.507	ENSMPUG00000001818	R3HDM2	96	63.798	Mustela_putorius_furo
ENSPREG00000008424	r3hdm2	99	65.250	ENSMLUG00000004980	R3HDM2	99	64.662	Myotis_lucifugus
ENSPREG00000008424	r3hdm2	99	64.641	ENSNGAG00000018800	R3hdm2	99	64.940	Nannospalax_galili
ENSPREG00000008424	r3hdm2	100	87.987	ENSNBRG00000004483	r3hdm2	100	86.902	Neolamprologus_brichardi
ENSPREG00000008424	r3hdm2	100	65.241	ENSNLEG00000017351	R3HDM2	99	64.917	Nomascus_leucogenys
ENSPREG00000008424	r3hdm2	99	56.787	ENSMEUG00000008588	R3HDM2	99	55.771	Notamacropus_eugenii
ENSPREG00000008424	r3hdm2	100	59.666	ENSOPRG00000013670	R3HDM2	99	57.961	Ochotona_princeps
ENSPREG00000008424	r3hdm2	100	90.225	ENSONIG00000005075	r3hdm2	100	90.127	Oreochromis_niloticus
ENSPREG00000008424	r3hdm2	99	64.793	ENSOCUG00000013258	R3HDM2	99	64.391	Oryctolagus_cuniculus
ENSPREG00000008424	r3hdm2	100	90.028	ENSORLG00000005502	r3hdm2	100	90.308	Oryzias_latipes
ENSPREG00000008424	r3hdm2	100	90.047	ENSORLG00020017069	r3hdm2	100	90.332	Oryzias_latipes_hni
ENSPREG00000008424	r3hdm2	100	90.142	ENSORLG00015012735	r3hdm2	100	90.427	Oryzias_latipes_hsok
ENSPREG00000008424	r3hdm2	99	85.730	ENSOMEG00000018079	r3hdm2	99	82.192	Oryzias_melastigma
ENSPREG00000008424	r3hdm2	96	57.558	ENSOGAG00000027966	-	99	57.042	Otolemur_garnettii
ENSPREG00000008424	r3hdm2	99	62.570	ENSOGAG00000012055	R3HDM2	99	62.160	Otolemur_garnettii
ENSPREG00000008424	r3hdm2	99	64.031	ENSOARG00000006929	R3HDM2	99	64.341	Ovis_aries
ENSPREG00000008424	r3hdm2	100	65.241	ENSPPAG00000034395	R3HDM2	99	64.917	Pan_paniscus
ENSPREG00000008424	r3hdm2	100	64.599	ENSPPRG00000009240	R3HDM2	99	63.610	Panthera_pardus
ENSPREG00000008424	r3hdm2	100	64.599	ENSPTIG00000008752	R3HDM2	99	63.610	Panthera_tigris_altaica
ENSPREG00000008424	r3hdm2	100	65.134	ENSPTRG00000046457	R3HDM2	99	64.820	Pan_troglodytes
ENSPREG00000008424	r3hdm2	100	65.134	ENSPANG00000024002	R3HDM2	97	66.905	Papio_anubis
ENSPREG00000008424	r3hdm2	100	79.755	ENSPKIG00000003171	r3hdm2	100	79.002	Paramormyrops_kingsleyae
ENSPREG00000008424	r3hdm2	63	55.873	ENSPSIG00000006954	R3HDM2	99	54.325	Pelodiscus_sinensis
ENSPREG00000008424	r3hdm2	99	85.044	ENSPMGG00000007061	r3hdm2	99	86.597	Periophthalmus_magnuspinnatus
ENSPREG00000008424	r3hdm2	99	64.266	ENSPEMG00000015964	R3hdm2	99	63.830	Peromyscus_maniculatus_bairdii
ENSPREG00000008424	r3hdm2	99	63.340	ENSPCIG00000023841	R3HDM2	99	63.725	Phascolarctos_cinereus
ENSPREG00000008424	r3hdm2	99	94.006	ENSPFOG00000006077	r3hdm2	92	94.295	Poecilia_formosa
ENSPREG00000008424	r3hdm2	100	99.431	ENSPLAG00000002971	r3hdm2	100	99.431	Poecilia_latipinna
ENSPREG00000008424	r3hdm2	100	99.431	ENSPMEG00000005330	r3hdm2	100	99.431	Poecilia_mexicana
ENSPREG00000008424	r3hdm2	97	60.645	ENSPPYG00000004685	R3HDM2	80	59.623	Pongo_abelii
ENSPREG00000008424	r3hdm2	88	78.445	ENSPCAG00000014642	R3HDM2	92	79.505	Procavia_capensis
ENSPREG00000008424	r3hdm2	100	64.599	ENSPCOG00000013201	R3HDM2	99	64.529	Propithecus_coquereli
ENSPREG00000008424	r3hdm2	99	65.250	ENSPVAG00000003967	R3HDM2	99	64.755	Pteropus_vampyrus
ENSPREG00000008424	r3hdm2	94	86.114	ENSPNYG00000013479	r3hdm2	100	85.907	Pundamilia_nyererei
ENSPREG00000008424	r3hdm2	100	75.316	ENSPNAG00000017473	r3hdm2	100	77.034	Pygocentrus_nattereri
ENSPREG00000008424	r3hdm2	100	61.197	ENSRNOG00000007801	R3hdm2	99	63.401	Rattus_norvegicus
ENSPREG00000008424	r3hdm2	99	63.265	ENSRBIG00000037403	R3HDM2	99	63.071	Rhinopithecus_bieti
ENSPREG00000008424	r3hdm2	100	65.134	ENSRROG00000022271	R3HDM2	99	64.820	Rhinopithecus_roxellana
ENSPREG00000008424	r3hdm2	100	64.681	ENSSBOG00000023547	R3HDM2	99	64.723	Saimiri_boliviensis_boliviensis
ENSPREG00000008424	r3hdm2	99	63.527	ENSSHAG00000003511	R3HDM2	99	64.868	Sarcophilus_harrisii
ENSPREG00000008424	r3hdm2	100	73.827	ENSSFOG00015011219	r3hdm2	99	77.721	Scleropages_formosus
ENSPREG00000008424	r3hdm2	100	89.581	ENSSMAG00000012073	r3hdm2	100	91.061	Scophthalmus_maximus
ENSPREG00000008424	r3hdm2	100	91.517	ENSSDUG00000019269	r3hdm2	100	91.353	Seriola_dumerili
ENSPREG00000008424	r3hdm2	100	91.551	ENSSLDG00000005252	r3hdm2	100	91.574	Seriola_lalandi_dorsalis
ENSPREG00000008424	r3hdm2	94	58.621	ENSSARG00000003958	R3HDM2	80	69.737	Sorex_araneus
ENSPREG00000008424	r3hdm2	99	61.169	ENSSPUG00000014132	R3HDM2	99	59.849	Sphenodon_punctatus
ENSPREG00000008424	r3hdm2	100	91.353	ENSSPAG00000022594	r3hdm2	100	92.011	Stegastes_partitus
ENSPREG00000008424	r3hdm2	100	64.681	ENSSSCG00000026498	R3HDM2	100	65.976	Sus_scrofa
ENSPREG00000008424	r3hdm2	72	63.245	ENSTGUG00000015881	R3HDM2	99	61.196	Taeniopygia_guttata
ENSPREG00000008424	r3hdm2	100	86.703	ENSTRUG00000015075	r3hdm2	98	86.595	Takifugu_rubripes
ENSPREG00000008424	r3hdm2	88	95.330	ENSTNIG00000007057	r3hdm2	90	90.385	Tetraodon_nigroviridis
ENSPREG00000008424	r3hdm2	82	64.626	ENSTBEG00000015967	R3HDM2	78	64.286	Tupaia_belangeri
ENSPREG00000008424	r3hdm2	92	66.129	ENSTTRG00000013082	R3HDM2	94	61.702	Tursiops_truncatus
ENSPREG00000008424	r3hdm2	100	62.461	ENSUAMG00000020913	R3HDM2	99	64.206	Ursus_americanus
ENSPREG00000008424	r3hdm2	96	63.525	ENSUMAG00000019179	R3HDM2	96	64.486	Ursus_maritimus
ENSPREG00000008424	r3hdm2	90	80.328	ENSVPAG00000008656	R3HDM2	89	80.135	Vicugna_pacos
ENSPREG00000008424	r3hdm2	93	66.865	ENSVVUG00000018014	R3HDM2	95	64.064	Vulpes_vulpes
ENSPREG00000008424	r3hdm2	99	62.086	ENSXETG00000017153	r3hdm2	99	60.819	Xenopus_tropicalis
ENSPREG00000008424	r3hdm2	92	95.428	ENSXCOG00000013882	r3hdm2	100	95.647	Xiphophorus_couchianus
ENSPREG00000008424	r3hdm2	100	98.695	ENSXMAG00000017978	r3hdm2	100	98.695	Xiphophorus_maculatus